References
- Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
- Bernt M, Donath A, Juhling F, Externbrink F, Florentz C, Fritzsch G, Putz J, 2013. Middendorf M, Stadler PF. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
- Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
- Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol Biol Evol. 34 (3):772–773.
- Letunic I, Bork P. 2019. Interactive Tree Of Life (iTOL) v4: recent updates and new developments. Nucleic Acids Res. 47(W1):W256–W259.
- Meigen JW. 1818. Systematische Beschreibung der bekannten europäischen zweiflügeligen Insekten. Erster Teil. F.W. Forstmann, Aachen. i–xxxvi. + 1–:3332. + [1], pl. 1–11.
- Minh BQ, Nguyen MA, von Haeseler A. 2013. Ultrafast approximation for phylogenetic bootstrap. Mol Biol Evol. 30(5):1188–1195.
- Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32 (1):268–274.
- Sæther OA. 1990. A review of the genus Limnophyes Eaton from the Holarctic and Afrotropical regions (Diptera: Chironomidae, Orthocladiinae). Entomologica Scandinavica Supplement. 35:135.
- Wang X. 2000. A revised checklist of Chironomidae from China (Diptera). In: Hoffrichter O, editor. Late 20th century research on Chironomidae. An anthology from the 13th international symposium on Chironomidae. Achen: Shaker Verlag; p. 629–652.
- Wood DM, Borkent A. 1989. Phylogeny and classification of the Nematocera. In: McAlpine JF, Wood DM, editors. Manual of Nearctic Diptera. Vol. 3. Ottawa: ResearchBranch, Agriculture Canada, Monograph 32; p. 1333–1370.
- Zhang D, Gao F, Jakovlić I, Zou H, Zhang J, Li WX, Wang GT. 2020. PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Mol Ecol Resour. 20(1):348–355.