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Mitogenome Announcement

The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)

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Pages 1594-1596 | Received 27 Jun 2022, Accepted 16 Aug 2022, Published online: 02 Sep 2022

References

  • Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T. 2009. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics. 25(15):1972–1973.
  • Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Li L, Zhang X. 2007. Germination strategies of two halophytes in Salt Desert of northwestern China. Sci China Ser D. 50(S1):115–121.
  • Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R. 2020. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol. 37(5):1530–1534.
  • Rozewicki J, Li S, Amada KM, Standley DM, Katoh K. 2019. MAFFT-DASH: integrated protein sequence and structural alignment. Nucleic Acids Res. 47(W1):W5–W10.
  • Schütze P, Freitag H, Weising K. 2003. An integrated molecular and morphological study of the subfamily Suaedoideae Ulbr. (Chenopodiaceae). Plant Syst Evol. 239(3–4):257–286.
  • Song J, Ding X, Feng G, Zhang F. 2006. Nutritional and osmotic roles of nitrate in a euhalophyte and a xerophyte in saline conditions. New Phytol. 171(2):357–365.
  • Song J, Feng G, Tian CY, Zhang FS. 2005. Strategies for adaptation of Suaeda physophora, Haloxylon ammodendron and Haloxylon persicum to a saline environment during seed-germination stage. Ann Bot. 96(3):399–405.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Walker BJ, Abeel T, Shea T, Priest M, Abouelliel A, Sakthikumar S, Cuomo CA, Zeng Q, Wortman J, Young SK, et al. 2014. Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement. PLoS One. 9(11):e112963.
  • Wick RR, Schultz MB, Zobel J, Holt KE. 2015. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 31(20):3350–3352.
  • Yang X, Yu H, Zhang T, Guo J, Zhang X. 2016. Arbuscular mycorrhizal fungi improve the antioxidative response and the seed production of Suaedoideae species Suaeda physophora Pall under salt stress. Notul Bot Horti Agrobot. 44(2):533–540.
  • Yuan J-F, Feng G, Ma H-Y, Tian C-Y. 2010. Effect of nitrate on root development and nitrogen uptake of Suaeda physophora under NaCl salinity. Pedosphere. 20(4):536–544.