401
Views
0
CrossRef citations to date
0
Altmetric
Plastome Announcement

The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China

, , , , , , & ORCID Icon show all
Pages 1787-1788 | Received 08 Feb 2022, Accepted 17 Sep 2022, Published online: 11 Oct 2022

References

  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Li HE, Guo QQ, Li Q, Lan Y. 2020. Long-reads reveal that Rhododendron delavayi plastid genome contains extensive repeat sequences, and recombination exists among plastid genomes of photosynthetic Ericaceae. PeerJ. 8:e9048.
  • Liu D, Fu CN, Yin LJ, Ma YP. 2020. Complete plastid genome of Rhododendrongriersonianum, a critically endangered plant with extremely small populations (PSESP) from southwest China. Mitochondrial DNA B Resour. 5(3):3, 3086–3087.
  • Ma LH, Zhu HX, Wang CY, Li MY, Wang HY. 2021. The complete chloroplast genome of Rhododendronplatypodum (Ericaceae): an endemic and endangered species from China. Mitochondrial DNA B Resour. 6(1):196–197.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22(21):2688–2690.
  • Zhao K, Shao JW, Wang G, Wang GX. 2012. Analyses of geographical distribution and population status of Rhododendron shanni. J Plant Resour Environ. 21(3):93–97.
  • Zhao K, Yang WH, Chen WL, Shao JW. 2010. A revise of stamen number to an endangered plant: Rhododendron shanii Fang. Bull Bot Res. 30(6):664–667.