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Plastome Announcement

Characterization of the complete chloroplast genome sequence of Stipa bungeana (Poaceae), an important forage grass in the temperate steppe of Northern China

, , & ORCID Icon
Pages 1948-1951 | Received 27 Jul 2022, Accepted 18 Oct 2022, Published online: 11 Nov 2022

References

  • Baiakhmetov E, Guyomar C, Shelest E, Nobis M, Gudkova PD. 2021. The first draft genome of feather grasses using SMRT sequencing and its implications in molecular studies of Stipa. Sci Rep. 11(1):15345.
  • Baiakhmetov E, Nowak A, Gudkova PD, Nobis M. 2020. Morphological and genome-wide evidence for natural hybridisation within the genus Stipa (Poaceae). Sci Rep. 10(1):13803.
  • Chase MW, Christenhusz MJM, Fay MF, Byng JW, Judd WS, Soltis DE, et al. 2016. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV. Bot J Linn Soc. 181(1):1–20.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–W64.
  • Huang D, Cronk QCB. 2015. Plann: a command-line application for annotating plastome sequences. Appl Plant Sci. 3(8):1500026.
  • Jia S. 1997. Flora of Chinese forage plants. Beijing: China Agriculture Press.
  • Jing Z, Yu J, Cheng J. 2013. Genetic diversity of a dominant species Stipa bungeana and its conservation strategy in the Loess Plateau of China. Biochem Syst Ecol. 47:126–131.
  • Katoh K, Standley D. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Krawczyk K, Nobis M, Myszczyński K, Klichowska E, Sawicki J. 2018. Plastid super-barcodes as a tool for species discrimination in feather grasses (Poaceae: Stipa). Sci Rep. 8(1):1924.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35(6):1547–1549.
  • Kuo P. 1987. Flora of China. Vol. 9(3). Beijing: Science Press.
  • Kuo P, Sun Y. 1982. A preliminary study on the classification, distribution and ecological nature of genus Stipa L. of China. J Univ Chinese Acad Sci. 20(1):34–44.
  • Mishra P, Kumar A, Nagireddy A, Mani DN, Shukla AK, Tiwari R, Sundaresan V. 2016. DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market. Plant Biotechnol J. 14(1):8–21.
  • Myszczyński K, Nobis M, Szczecinska M, Sawicki J, Nowak A. 2016. The complete plastid genome of the middle Asian endemic of Stipa lipskyi (Poaceae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(6):4661–4662.
  • Nobis M, Gudkova PD, Baiakhmetov E, Żabicka J, Krawczyk K, Sawicki J. 2019. Hybridisation, introgression events and cryptic speciation in Stipa (Poaceae): A case study of the Stipa heptapotamica hybrid-complex. Perspect Plant Ecol Evol Syst. 39:125457.
  • Nurk S, Bankevich A, Antipov D, Gurevich AA, Korobeynikov A, Lapidus A, Prjibelski AD, Pyshkin A, Sirotkin A, Sirotkin Y, et al. 2013. Assembling single-cell genomes and mini-metagenomes from chimeric MDA products. J Comput Biol. 20(10):714–737.
  • Stefanova P, Taseva M, Georgieva T, Gotcheva V, Angelov A. 2013. A modified CTAB method for DNA extraction from soybean and meat products. Biotechnol Biotec Eq. 27(3):3803–3810.
  • Van Do T, Xu B, Gao X. 2021. Molecular phylogeny and character evolution of Flemingia (Leguminosae, Papilionoideae, Phaseoleae, Cajaninae) inferred from three cpDNA and nrITS sequence data. Plant Syst Evol. 307(2):30.