First complete mitochondrial genome of the Saharan striped polecat (Ictonyx libycus)

References

• Ahmim M, Do Linh San E. 2015. Ictonyx libycus. The IUCN Red List of Threatened Species. 2015.
   Google Scholar
• Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/.
   Google Scholar
• Arnason U, Gullberg A, Janke A, Kullberg M. 2007. Mitogenomic analyses of caniform relationships. Mol Phylogenet Evol. 45(3):863–874.
   PubMedGoogle Scholar
• Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
   PubMed Web of Science ®Google Scholar
• Boukhdoud L, Parker LD, Mcinerney NR, Saliba C, Kahale R, Cross H, Matisoo-Smith E, Maldonado JE, Bou Dagher Kharrat M. 2021. First mitochondrial genome of the marbled polecat Vormela peregusna (Carnivora, Mustelidae). Mitochondrial DNA B Resour. 6(3):1009–1011.
   PubMed Web of Science ®Google Scholar
• Brito JC, Godinho R, Martínez-Freiría F, Pleguezuelos JM, Rebelo H, Santos X, Vale CG, Velo-Antón G, Boratyński Z, Carvalho SB, et al. 2014. Unravelling biodiversity, evolution and threats to conservation in the Sahara-Sahel. Biol Rev Camb Philos Soc. 89(1):215–231.
   PubMed Web of Science ®Google Scholar
• Bushnell B. 2014. BBMap: a fast, accurate, splice-aware aligner. No. LBNL-7065E.
   Google Scholar
• Gray 1. E. 1864. Notice of a new species of zorilla. Proceedings of the Zoological Society of London 1864:p. 69–70.
   Google Scholar
• Hassanin A, Veron G, Ropiquet A, Vuuren BJv, Lécu A, Goodman SM, Haider J, Nguyen TT. 2021. Evolutionary history of Carnivora (Mammalia, Laurasiatheria) inferred from mitochondrial genomes. PLoS One. 16(2):e0240770.
   PubMed Web of Science ®Google Scholar
• Hemprich FG, Ehrenberg CG. 1833. Symbolae Physicae, seu icones et descriptiones corporum naturalium novorum aut minus cognitorum quae ex itin eribus per Libyam Aegyptum Nubiam Dongolam Syrian Arabiam et Habessianiam publico institutis sumptu. Berlin, Germany: Signature ff. Ex Officina Academica, venditur a Mittlero.
   Google Scholar
• Katoh K, Standley DM. 2013. MAFFT Multiple Sequence Alignment Software Version 7: improvements in Performance and Usability. Mol Biol Evol. 30(4):772–780.
   PubMed Web of Science ®Google Scholar
• Koepfli K-P, Deere KA, Slater GJ, Begg C, Begg K, Grassman L, Lucherini M, Veron G, Wayne RK. 2008. Multigene phylogeny of the Mustelidae: resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation. BMC Biol. 6(1):10.
   PubMedGoogle Scholar
• Law CJ, Slater GJ, Mehta RS. 2018. Lineage diversity and size disparity in Musteloidea: testing patterns of adaptive radiation using molecular and fossil-based methods. Syst Biol. 67(1):127–144.
   PubMed Web of Science ®Google Scholar
• Lindgreen S. 2012. AdapterRemoval: easy cleaning of next generation sequencing reads. BMC Res Notes. 5:337.
   PubMedGoogle Scholar
• Mohd Salleh F, Ramos-Madrigal J, Peñaloza F, Liu S, Mikkel-Holger SS, Riddhi PP, Martins R, Lenz D, Fickel J, Roos C, et al. 2017. An expanded mammal mitogenome dataset from Southeast Asia. Gigascience. 6(8):1–8.
   PubMed Web of Science ®Google Scholar
• Perry GC. 1810. Arcana; or, the Museum of Natural History. G. Smeeton, London, United Kingdom, single unpaged volume, signature YT (not seen, cited in Shortridge 1934).
   Google Scholar
• Sato JJ, Wolsan M, Prevosti FJ, D'Elía G, Begg C, Begg K, Hosoda T, Campbell KL, Suzuki H. 2012. Evolutionary and biogeographic history of weasel-like carnivorans (Musteloidea). Mol Phylogenet Evol. 63(3):745–757.
   PubMed Web of Science ®Google Scholar
• Schubert M, Ermini L, Sarkissian CD, Jónsson H, Ginolhac A, Schaefer R, Martin MD, Fernández R, Kircher M, McCue ME, et al. 2014. Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX. Nat Protoc. 9(5):1056–1082.
   PubMed Web of Science ®Google Scholar
• Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
   PubMed Web of Science ®Google Scholar
• Waku D, Segawa T, Yonezawa T, Akiyoshi A, Ishige T, Ueda M, Ogawa H, Sasaki H, Ando M, Kohno N, et al. 2016. Evaluating the phylogenetic status of the extinct japanese otter on the basis of mitochondrial genome analysis. PLoS One. 11(3):e0149341.
   PubMedGoogle Scholar
• Wilson, D. E., and R. A. Mittermeier (eds.) 2015. Handbook of mammals of the world, vol. 5: monotremes and marsupials. Lynx Edicions. Barcelona: Spain, p. 799. pp. ISBN: 978-84-9655399-6
   Google Scholar
• Xu C, Zhang H, Ma J, Liu Z. 2012. The complete mitochondrial genome of sable, Martes zibellina. Mitochondrial DNA. 23(3):167–169.
   PubMed Web of Science ®Google Scholar
• Yonezawa T, Nikaido M, Kohno N, Fukumoto Y, Okada N, Hasegawa M. 2007. Molecular phylogenetic study on the origin and evolution of Mustelidae. Gene. 396(1):1–12.
   PubMedGoogle Scholar
• Yu L, Peng D, Liu J, Luan P, Liang L, Lee H, Lee M, Ryder OA, Zhang Y. 2011. On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes. BMC Evol Biol. 11(1):92.
   PubMedGoogle Scholar
• Zhao R-B, Zhou C-Y, Lu Z-X, Hu P, Liu J-Q, Tan W-W, Yang T-H. 2016. The complete mitochondrial genome of black-footed ferret, Mustela nigripes (Mustela, Mustelinae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(3):1595–1596.
   PubMedGoogle Scholar