412
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of Cuspidaria undata (Bivalvia, Anomalodesmata, Cuspidariidae)

, , , & ORCID Icon
Pages 157-160 | Received 23 Jun 2022, Accepted 08 Jan 2023, Published online: 26 Jan 2023

References

  • Amano K, Kurita H. 2020. A new Paleocene species of Myonera (Bivalvia: Cuspidariidae) from eastern Hokkaido, Northern Japan. Nautilus Greenville Then Sanibel. 134(1):51–56.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–W64.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
  • Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol Biol Evol. 34(3):772–773.
  • Morton B, Machado FM. 2019. Predatory marine bivalves: a review. Adv Mar Biol. 84:1–98.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Park H, Ahn DH. 2015. Complete mitochondrial genome of the Antarctic soft-shelled clam, Laternula elliptica (Bivalvia; Laternulidae). Mitochondrial DNA. 26(4):642–643.
  • Soroka M, Burzyński A. 2017. Hermaphroditic freshwater mussel Anodonta cygnea does not have supranumerary open reading frames in the mitogenome. Mitochondrial DNA B Resour. 2(2):862–864.
  • Talavera G, Castresana J. 2007. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol. 56(4):564–577.
  • Vaidya G, Lohman DJ, Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics. 27(2):171–180.
  • Williams ST, Foster PG, Hughes C, Harper EM, Taylor JD, Littlewood DTJ, Dyal P, Hopkins KP, Briscoe AG. 2017. Curious bivalves: systematic utility and unusual properties of anomalodesmatan mitochondrial genomes. Mol Phylogenet Evol. 110:60–72.
  • Wick RR, Schultz MB, Zobel J, Holt KE. 2015. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 31(20):3350–3352.
  • Worms. 2020. World register of marine species. http://www.marinespecies.org/aphia.php?p=taxdetails&id=1788.
  • Wu RW, An CT, Wu XP, Zhou CH, Ouyang S. 2016. Complete maternal mitochondrial genome of freshwater mussel Aculamprotula tientsinensis (Bivalvia: unionidae: unioninae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(6):4520–4521.