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Plastome Report

Characterization of the chloroplast genome of Chlorolobion braunii ITBB-AG6 isolated from a treatment pond of sanitary sewage

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Pages 777-782 | Received 04 Apr 2023, Accepted 12 Jul 2023, Published online: 27 Jul 2023

References

  • Baracho DH, Silva JC, Lombardi AT. 2019. The effects of copper on photosynthesis and biomolecules yield in Chlorolobion braunii. J Phycol. 55(6):1335–1347. doi: 10.1111/jpy.12914.
  • Chan PP, Lowe TM. 2019. tRNAscan-SE: searching for tRNA genes in genomic sequences. Methods Mol Biol. 1962:1–14. doi: 10.1007/978-1-4939-9173-0_1.
  • Chen W, Zhang C, Song L, Sommerfeld M, Hu Q. 2009. A high throughput Nile red method for quantitative measurement of neutral lipids in microalgae. J Microbiol Methods. 77(1):41–47. doi: 10.1016/j.mimet.2009.01.001.
  • El-Sheekh MM, Galal HR, Mousa ASH, Farghl AAM. 2023. Coupling wastewater treatment, biomass, lipids, and biodiesel production of some green microalgae. Environ Sci Pollut Res Int. 30(12):35492–35504. doi: 10.1007/s11356-023-25628-y.
  • Fucikova K, Lewis PO, Lewis LA. 2014. Putting incertae sedis taxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta). J Phycol. 50(1):14–25. doi: 10.1111/jpy.12118.
  • Fucikova K, Lewis PO, Lewis LA. 2016. Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution. Mol Phylogenet Evol. 98:176–183. doi: 10.1016/j.ympev.2016.01.022.
  • Gattullo CE, Bahrs H, Steinberg CE, Loffredo E. 2012. Removal of bisphenol A by the freshwater green alga Monoraphidium braunii and the role of natural organic matter. Sci Total Environ. 416:501–506. doi: 10.1016/j.scitotenv.2011.11.033.
  • Gorman DS, Levine RP. 1965. Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardi. Proc Natl Acad Sci U S A. 54(6):1665–1669. doi: 10.1073/pnas.54.6.1665.
  • Guiry MD, Guiry GM. 2018. AlgaeBase.World-wide electronic publication, National University of Ireland, Galway. https://www.algaebase.org; [cited 2023 Mar 2].
  • Han B, Mu Y, Tan D, Ma S, Fu L, Sun X, Zhang J. 2021. The chloroplast genome of a unicellular green alga strain isolated from the rubber processing wastewater. Mitochondrial DNA B Resour. 6(1):15–16. doi: 10.1080/23802359.2020.1844090.
  • Hu X, Tan D, Fu L, Sun X, Zhang J. 2020. Characterization of the mitochondrion genome of a Chlorella vulgaris strain isolated from rubber processing wastewater. Mitochondrial DNA B Resour. 5(3):2732–2733. doi: 10.1080/23802359.2020.1789004.
  • Jones DT, Taylor WR, Thornton JM. 1992. The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci. 8(3):275–282. doi: 10.1093/bioinformatics/8.3.275.
  • Komárek J. 1979. Änderungen in der Taxonomie der Chlorokokkalalgen. Arch Für Hydrobiol Suppl. 56(24):239–263.
  • Komárková-Legnerová J. 1969. The systematics and ontogenesis of the genera Ankistrodesmus Corda and Monoraphidium gen. nov. In: Fott B, editor. Studies in phycology. Prague: Academia Publishing House of the Czechoslovak Academy of Sciences; p. 75–144.
  • Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM. 2017. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. Genome Res. 27(5):722–736. doi: 10.1101/gr.215087.116.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35(6):1547–1549. doi: 10.1093/molbev/msy096.
  • Ni Y, Li J, Zhang C, Liu C. 2023. Generating sequencing depth and coverage map for organelle genomes. protocols.io. doi: 10.17504/protocols.io.4r3l27jkxg1y/v1.
  • Ruan J, Li H. 2020. Fast and accurate long-read assembly with wtdbg2. Nat Methods. 17(2):155–158. doi: 10.1038/s41592-019-0669-3.
  • Sievers F, Higgins DG. 2021. The clustal omega multiple alignment package. Methods Mol Biol. 2231:3–16. doi: 10.1007/978-1-0716-1036-7_1.
  • Wang Q, Shen Q, Wang J, Zhang Y, Zhang Z, Lei Z, Shimizu K, Lee DJ. 2020. Fast cultivation and harvesting of oil-producing microalgae Ankistrodesmus falcatus var. acicularis fed with anaerobic digestion liquor via biogranulation in addition to nutrients removal. Sci Total Environ. 741:140183. doi: 10.1016/j.scitotenv.2020.140183.