Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 8, 2023 - Issue 12
Submit an article Journal homepage
703
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Report

The complete mitochondrial genome of a new species of the genus Schizothorax from Sichuan, China (Cypriniformes: Cyprinidae)

Ying Wanga Key Laboratory of Application of Ecology and Environmental Protection in Plateau Wetland of Sichuan, Xichang University, Xichang, PR ChinaView further author information
,
Pan Shangb Key Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture, Shanghai Ocean University, Shanghai, PR ChinaView further author information
,
Yuanxing Daic Gulin County Bureau of Agriculture and Rural Affairs, Luzhou, PR ChinaView further author information
,
Dayong Xua Key Laboratory of Application of Ecology and Environmental Protection in Plateau Wetland of Sichuan, Xichang University, Xichang, PR ChinaView further author information
,
Yanzhen Donga Key Laboratory of Application of Ecology and Environmental Protection in Plateau Wetland of Sichuan, Xichang University, Xichang, PR ChinaView further author information
&
Zhiqiu Huanga Key Laboratory of Application of Ecology and Environmental Protection in Plateau Wetland of Sichuan, Xichang University, Xichang, PR ChinaCorrespondence[email protected]
View further author information
Pages 1356-1359 | Received 21 May 2023, Accepted 21 Nov 2023, Published online: 08 Dec 2023

References

  • Bernt M, Donath A, J€uhling F, Externbrink F, Florentz C, Fritzsch G, P€utz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319. doi: 10.1016/j.ympev.2012.08.023.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120. doi: 10.1093/bioinformatics/btu170.
  • Broughton RE, Milam JE, Roe BA. 2001. The complete sequence of the zebrafish (Danio rerio) mitochondrial genome and evolutionary patterns in vertebrate mitochondrial DNA. Genome Res. 11(11):1958–1967. doi: 10.1101/gr.156801.
  • Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL. 2009. BLAST+: architecture and applications. BMC Bioinformatics. 10(1):421. doi: 10.1186/1471-2105-10-421.
  • Cao WX, Wu XW. 1964. Fauna of cyprinidacin China (volume I). Shanghai, China: Shanghai Science and Technology Press; p. 137–197.
  • Ding RH, Dai YX, Huag YY. 2022. A new species of the genus schizothorax from Sichuan, China (Cypriniformes: cyprinidae). Sichuan J Zool. 41(3):300–303.
  • Grant JR, Stothard P. 2008. The CGView Server: a comparative genomics tool for circular genomes. Nucleic Acids Res. 36:W181–4. doi: 10.1093/nar/gkn179.
  • Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL. 2004. Versatile and open software for comparing large genomes. Genome Biol. 5(2):R12. doi: 10.1186/gb-2004-5-2-r12.
  • Li ZL, Chen YX, Hu SY, Zhao HT. 2015. Multivariate Analysis on the Morphological Differentiation of Kozlov’s Schizothoracin (Schizothorax kozlovi) and David’s Schizothoracin (S. davidi). Chin J Zool. 50(4):547–554.
  • Mabuchi K, Miya M, Senou H, Suzuki T, Nishida M. 2006. Complete mitochondrial DNA sequence of the Lake Biwa wild strain of common carp (Cyprinus carpio L.): further evidence for an ancient origin. Aquaculture. 257(1–4):68–77. doi: 10.1016/j.aquaculture.2006.03.040.
  • Meland S, Johansen S, Johansen T, Haugli K, Haugli F. 1991. Rapid disappearance of one parental mitochondrial genotype after isogamous mating in the myxomycete physarum polycephalum. Curr Genet. 19(1):55–59. doi: 10.1007/BF00362088.
  • Meng GL, Li YY, Yang CT, Liu SL. 2019. MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization. Nucleic Acids Res. 47(11):e63–e63. doi: 10.1093/nar/gkz173.
  • Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R. 2020. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol. 37(5):1530–1534. doi: 10.1093/molbev/msaa015.
  • Qi D, Chao Y, Guo S, Zhao L, Li T, Wei F, Zhao X. 2012. Convergent, parallel and correlated evolution of trophic morphologies in the subfamily Schizothoracinae from the Qinghai-Tibetan Plateau. PLoS One. 7(3):e34070. doi: 10.1371/journal.pone.0034070.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542. doi: 10.1093/sysbio/sys029.
  • Xu QH, Zhang C, Zhang DS, Jiang HP, Peng SH, Liu Y, Zhao K, Wang CC, Chen LB. 2016. Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments. BMC Evol. Biol. 16(1):11.
  • Zheng Z, Yu E, Li ZF, Ou HX, Wang GJ. 2016. The complete mitochondrial genome of Shizothorax grahami (Cypriniformes: cyprinidae). Mitochondrial DNA B Resour. 1(1):775–776. doi: 10.1080/23802359.2016.1238757.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.