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Mitochondrial DNA Part B
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Volume 8, 2023 - Issue 12
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MitoGenome Report

Complete mitochondrial genome of the western painted turtle (Chrysemys picta bellii, Testudines: Emydidae) in Korea

Jaehong Parka School of Biological Sciences and Biotechnology Graduate School, Chonnam National University, Gwangju, KoreaORCID Iconhttps://orcid.org/0000-0002-6572-6588View further author information
ORCID Icon,
Seung-Min Parka School of Biological Sciences and Biotechnology Graduate School, Chonnam National University, Gwangju, KoreaORCID Iconhttps://orcid.org/0000-0002-4398-1115View further author information
ORCID Icon,
Jae-Hyuk Choia School of Biological Sciences and Biotechnology Graduate School, Chonnam National University, Gwangju, KoreaORCID Iconhttps://orcid.org/0000-0002-6360-3613View further author information
ORCID Icon,
Ha-Cheol Sungb Research Center of Ecomimetics, Chonnam National University, Gwangju, Korea;c Department of Biological Sciences, College of Natural Sciences, Chonnam National University, Gwangju, KoreaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0002-7494-7446View further author information
ORCID Icon &
Dong-Hyun Leeb Research Center of Ecomimetics, Chonnam National University, Gwangju, Korea;c Department of Biological Sciences, College of Natural Sciences, Chonnam National University, Gwangju, KoreaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0002-7182-0028View further author information
ORCID Icon
Pages 1316-1319 | Received 29 Aug 2023, Accepted 21 Nov 2023, Published online: 04 Dec 2023

References

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215(3):403–410. doi:10.1016/S0022-2836(05)80360-2.
  • Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. Babraham Bioinformatics, Babraham Institute, Cambridge, United Kingdom.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing. J Comput Biol. 19(5):455–477. doi:10.1089/cmb.2012.0021.
  • Bernt M, Donath A, Juhling F, Externbrink F, Florentz C, Fritzsch G, Putz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319. doi:10.1016/j.ympev.2012.08.023.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120. doi:10.1093/bioinformatics/btu170.
  • Cheon SJ, Rahman MM, Lee JA, Park SM, Park JH, Lee DH, Sung HC. 2023. Confirmation of the local establishment of alien invasive turtle, Pseudemys peninsularis, in South Korea, using eggshell DNA. PLoS One. 18(2):e0281808. doi:10.1371/journal.pone.0281808.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797. doi:10.1093/nar/gkh340.
  • Ernst CH, Lovich JE. 2009. Turtles of the United States and Canada. JHU Press.
  • Ham CH, Park SM, Lee JE, Park J, Lee DH, Sung HC. 2022. First report of the Black-headed python (Aspidites melanocephalus Krefft, 1864) found in the wild in the Republic of Korea. BIR. 11(2):571–577. doi:10.3391/bir.2022.11.2.29.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular Evolutionary Genetics Analysis across Computing Platforms. Mol Biol Evol. 35(6):1547–1549. doi:10.1093/molbev/msy096.
  • Marshall BM, Strine C, Hughes AC. 2020. Thousands of reptile species threatened by under-regulated global trade. Nat Commun. 11(1):4738. doi:10.1038/s41467-020-18523-4.
  • Oh HS, Hong CE. 2007. Current conditions of habitat for Rana catesbeiana and Trachemys scripta elegans imported to Jeju-do, including proposed management plans. Kor. J. Env. Eco. 21(4):311–317.
  • Park IK, Lee K, Jeong JH, Lee HB, Koo KS. 2020. First report of the non-native species, Western painted turtle (Chrysemys picta bellii), in the wild, Republic of Korea. Korean J Environ Biol. 38(1):16–20. doi:10.11626/KJEB.2020.38.1.016.
  • Park SM, Rahman MM, Ham CH, Sung, H, C. 2022. The first record of an invasive reptile species, Pelomedusa cf. olivacea (Schweigger, 1812) (Pelomedusidae, Testudines), in the wild of South Korea. CheckList. 18(5):989–993. doi:10.15560/18.5.989.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542. doi:10.1093/sysbio/sys029.
  • Sung YH, Fong JJ. 2018. Assessing consumer trends and illegal activity by monitoring the online wildlife trade. Biol Conserv. 227:219–225. doi:10.1016/j.biocon.2018.09.025.
  • Van Dijk PP. 2011. Chrysemys picta. The IUCN Red List of Threatened Species. 2011 e.T163467A97410447.
  • Waddell PJ, Steel MA. 1997. General time-reversible distances with unequal rates across sites: mixing gamma and inverse Gaussian distributions with invariant sites. Mol Phylogenet Evol. 8(3):398–414. doi:10.1006/mpev.1997.0452.

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