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Mitochondrial DNA Part B
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Volume 8, 2023 - Issue 12
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Plastome Report

Characterization of chloroplast genome and phylogenetic analysis of the Elaeagnus hybrid variety E. ‘viridis’ (Elaeagnaceae)

Naiwei Lia Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, ChinaView further author information
,
Hong Chena Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China;b Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, ChinaView further author information
,
Yanwei Zhoua Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China;b Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, ChinaView further author information
,
Xinran Chonga Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China;b Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, ChinaView further author information
,
Ting Zhoua Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China;b Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, ChinaView further author information
&
Fan Zhanga Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China;b Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, ChinaCorrespondence[email protected]
View further author information
Pages 1416-1420 | Received 30 Jul 2023, Accepted 02 Dec 2023, Published online: 18 Dec 2023

References

  • Chat J, Chalak L, Petit R. 1999. Strict paternal inheritance of chloroplast DNA and maternal inheritance of mitochondrial DNA in intraspecific crosses of kiwifruit. Theor Appl Genet. 99(1–2):314–322. doi: 10.1007/s001220051238.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18. doi: 10.1093/nar/gkw955.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Ellis JR, Bentley KE, McCauley DE. 2008. Detection of rare paternal chloroplast inheritance in controlled crosses of the endangered sunflower Helianthus verticillatus. Heredity. 100(6):574–580. doi: 10.1038/hdy.2008.11.
  • Ge Y, Li M, Mei Z, Yang G. 2013. Two new flavonol glycosides from the leaves of Elaeagnus pungens. J Asian Nat Prod Res. 15(10):1073–1079. doi: 10.1080/10286020.2013.812078.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780. doi: 10.1093/molbev/mst010.
  • Kim Y, Shin J, Kim D, Lee H, Choi C. 2020. Complete chloroplast genomes of E. umbellata Thunb., E. multiflora Thunb., E. macrophylla Thunb., and E. glabra Thunb. (Elaeagnaceae). Mitochondrial DNA B Resour. 5(3):2490–2492. doi: 10.1080/23802359.2020.1779142.
  • Li D, Qi X, Li X, Li L, Zhong C, Huang H. 2013. Maternal inheritance of mitochondrial genomes and complex inheritance of chloroplast genomes in Actinidia Lind.: evidences from interspecific crosses. Mol Genet Genomics. 288(3–4):101–110. doi: 10.1007/s00438-012-0732-6.
  • Liu S, Ni Y, Li J, Zhang X, Yang H, Chen H, Liu C. 2023. CPGView: A package for visualizing detailed chloroplast genome structures. Mol Ecol Resour. 23(3):694–704. doi:10.1111/1755-0998.13729.
  • Liu J, Gong L-D, Qi L, Liu Z-Y, Niu Y-F, Shi C. 2019. The complete chloroplast genome of Elaeagnus conferta Roxb (Elaeagnaceae). Mitochondrial DNA Part B. 4(1):2035–2036. doi: 10.1080/23802359.2019.1617074.
  • Lu Y, Ma Q, Xu X, Wang Z, Andrie I, Savitskaya T, Yuzuak S. 2022. Characterization of the complete chloroplast genome of Elaeagnus pungens (elaeagnaceae) and phylogeny within elaeagnaceae. Mitochondrial DNA B Resour. 7(7):1213–1215. doi: 10.1080/23802359.2022.2090291.
  • Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, Von Haeseler A, Lanfear R. 2020. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol. 37(5):1530–1534. doi: 10.1093/molbev/msaa015.
  • Shang Y-Y, Qin Q, Li M-S, Xu H-Y, Ge Y-B. 2017. Flavonol glycosides from the leaves of Elaeagnus pungens. Nat Prod Res. 31(9):1066–1072. doi: 10.1080/14786419.2016.1272109.
  • Sun M, Lin Q. 2010. A revision of Elaeagnus L. (Elaeagnaceae) in mainland China. Journal of Systematics and Evolution. 48(5):356–390. doi: 10.1111/j.1759-6831.2010.00085.x.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq–versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11. doi: 10.1093/nar/gkx391.
  • Wang W-C, Chen S-Y, Zhang X-Z. 2017. Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant. Conservation Genet Resour. 9(3):439–442. doi: 10.1007/s12686-017-0706-4.
  • Wei XP, Li HJ, Che P, Guo HJ, Zhang BG, Liu HT, Qi YD. 2020. Comparing chloroplast genomes of traditional Chinese herbs Schisandra sphenanthera and S. chinensis. Chin Herb Med. 12(3):247–256. doi: 10.1016/j.chmed.2019.09.009.
  • Zhao K, Wang J, Zhu Z, Shi G, Luo S, Wang H. 2020. Complete plastome sequence of Elaeagnus glabra (Elaeagnaceae): an Asian endemic plant species. Mitochondrial DNA B Resour. 5(1):288–289. doi: 10.1080/23802359.2019.1702483.

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