Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 8, 2023 - Issue 12
Submit an article Journal homepage
298
Views
0
CrossRef citations to date
0
Altmetric
Plastome Report

The complete chloroplast genome sequence of Ludwigia adscendens (L.) Hara, 1953 (Onagraceae)

Jieqiong Shena Pharmacy department, Zhejiang Hospital, Hangzhou, Zhejiang, ChinaView further author information
,
Xiaoqing Wana Pharmacy department, Zhejiang Hospital, Hangzhou, Zhejiang, ChinaView further author information
&
Jun Xiaob School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, ChinaCorrespondence[email protected]
View further author information
Pages 1421-1425 | Received 28 Sep 2023, Accepted 04 Dec 2023, Published online: 18 Dec 2023

References

  • Ahmed F, Selim MS, Shilpi JA. 2005. Antibacterial activity of Ludwigia adscendens. Fitoterapia. 76(5):473–475. doi: 10.1016/j.fitote.2005.04.007.
  • Baky MH, Elgindi MR, Shawky EM, Ibrahim HA. 2022. Phytochemical investigation of Ludwigia adscendens subsp. diffusa aerial parts in context of its biological activity. BMC Chem. 16(1):112. doi: 10.1186/s13065-022-00909-8.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477. doi: 10.1089/cmb.2012.0021.
  • Barik A, Bhattacharya B, Laskar S, Banerjee TC. 2004. The determination of n-alkanes in the cuticular wax of leaves of Ludwigia adscendens L. Phytochem Anal. 15(2):109–111. doi: 10.1002/pca.745.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–w64. doi: 10.1093/nar/gkz238.
  • Jin J-J, Yu W-B, Yang J-B, Song Y, dePamphilis CW, Yi T-S, Li D-Z. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241. doi: 10.1186/s13059-020-02154-5.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780. doi: 10.1093/molbev/mst010.
  • Li Y-L, Tang S-Y, Dai Y, Jiang Y-T, Li B-G. 2019. Characterization of the complete plastid genome of fireweed, Epilobium angustifolium, Shaanxi, China. Mitochondrial DNA Part B Resour. 4(2):4023–4024. doi: 10.1080/23802359.2019.1688697.
  • Liu S-H, Edwards C, Hoch PC, Raven PH, Barber JC. 2016. Complete plastome sequence of Ludwigia octovalvis (Onagraceae), a Genome Announc. 4(6):e01274-16. doi: 10.1128/genomeA.01274-16.
  • Liu S, Ni Y, Li J, Zhang X, Yang H, Chen H, Liu C. 2023. CPGView: a package for visualizing detailed chloroplast genome structures. Mol Ecol Resour. 23(3):694–704. doi: 10.1111/1755-0998.13729.
  • Meng F, Jiang W, Wu L, Zhang J, Yao X, Wu J, Guo X, Xing S. 2021. The complete chloroplast genome of Epilobium hirsutum L. (Onagraceae). Mitochondrial DNA Part B Resour. 6(8):2174–2176. doi: 10.1080/23802359.2021.1945968.
  • Ooh K-F, Ong H-C, Wong F-C, Sit N-W, Chai T-T. 2014. High performance liquid chromatography profiling of health-promoting phytochemicals and evaluation of antioxidant, anti-lipoxygenase, iron chelating and anti-glucosidase activities of wetland macrophytes. Pharmacogn Mag. 10(Suppl 3):S443–S55. doi: 10.4103/0973-1296.139767.
  • Patel RK, Jain M. 2012. NGS QC Toolkit: a toolkit for quality control of next generation sequencing data. PLOS One. 7(2):e30619. doi: 10.1371/journal.pone.0030619.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313. doi: 10.1093/bioinformatics/btu033.
  • Xu L, Chen S, Zhuang P, Xie D, Yu X, Liu D, Li Z, Qin X, Wang F, Xing F. 2021. Purification efficiency of three combinations of native aquatic macrophytes in artificial wastewater in autumn. IJERPH. 18(11):6162. doi: 10.3390/ijerph18116162.
  • Xu L, Cheng S, Zhuang P, Xie D, Li S, Liu D, Li Z, Wang F, Xing F. 2020. Assessment of the nutrient removal potential of floating native and exotic aquatic macrophytes cultured in swine manure wastewater. IJERPH. 17(3):1103. doi: 10.3390/ijerph17031103.
  • Yang J-B, Tang M, Li H-T, Zhang Z-R, Li D-Z. 2013. Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses. BMC Evol Biol. 13(1):84. doi: 10.1186/1471-2148-13-84.
  • Yang JY, Chung JM, Kim SC. 2018. Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea. Mitochondrial DNA B Resour. 3(2):703–704. doi: 10.1080/23802359.2018.1481796.
  • Zhang B, Wu R, Liu M, Cai X, Cheng Y. 2021. Chloroplast genome of Gaura parviflora Douglas and its comparative analysis. Mitochondrial DNA B Resour. 6(3):760–761. doi: 10.1080/23802359.2021.1878960.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.