Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 28, 2017 - Issue 6
131
Views
2
CrossRef citations to date
0
Altmetric
Research Article

First assessment on the molecular phylogeny and phylogeography of the species Gnaptor boryi distributed in Greece (Coleoptera: Tenebrionidae)

, , &
Pages 927-934 | Received 26 Apr 2016, Accepted 30 Jun 2016, Published online: 08 Sep 2016

References

  • Akin Ç, Can Bilgin C, Beerli P, Westaway R, Ohst T, Litvinchuk SN, Uzzell T, Bilgin M, Hotz H, Guex GD, et al. 2010. Phylogeographic patterns of genetic diversity in eastern Mediterranean water frogs were determined by geological processes and climate change in the Late Cenozoic. J Biogeogr. 37:2111–2124.
  • Bouchard P, Grebennikov VV, Smith ABT, Douglas H. 2009. Biodiversity of Coleoptera. In: Foottit RG, Adler PH, editors. Insect biodiversity: science and society. Oxford (UK): Wiley-Blackwell. p. 265–301.
  • Brower AV. 1994. Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial-DNA evolution. Proc Natl Acad Sci USA. 91:6491–6495.
  • Chatzimanolis S, Trichas A, Giokas S, Mylonas M. 2003. Phylogenetic analysis and biogeography of Aegean taxa of the genus Dendarus (Coleoptera: Tenebrionidae). Insect Syst Evol. 34:295–312.
  • Chigray IA, Nabozhenko MV, Keskin B. 2016. A review of the genus Gnaptor Brullé, 1832 (Coleoptera, Tenebrionidae) with description of a new species from Turkey. Entomol Rev. 95:1131–1136.
  • Condamine FL, Soldati L, Rasplus JY, Kergoat GJ. 2011. New insights on systematics and phylogenetics of Mediterranean Blaps species (Coleoptera: Tenebrionidae: Blaptini), assessed through morphology and dense taxon sampling. Syst Entomol. 36:340–361.
  • Dermitzakis DM. 1990a. The colonisation of Aegean islands in relation with the paleogeographic evolution. Biol Gallo Hell. 17:99–130.
  • Dermitzakis DM. 1990b. Paleogeography, geodynamic processes and event stratigraphy during the Late Cenozoic of the Aegean area. Atti Conv Lincei. 85:263–288.
  • Drummond AJ, Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol. 7:214.
  • Duncan FD. 2003. The role of the subelytral cavity in respiration in a tenebrionid beetle, Onymacris multistriata (Tenebrionidae: Adesmiini). J Insect Physiol. 49:339–346.
  • Dutrillaux AM, Dutrillaux B. 2009. Sex chromosome rearrangements in polyphaga beetles. Sex Dev. 3:43–54.
  • Fattorini S. 2002. Biogeography of the tenebrionid beetles (Coleoptera, Tenebrionidae) on the Aegean Islands (Greece). J Biogeogr. 29:49–67.
  • Fattorini S. 2009. Faunal patterns in tenebrionids (Coleoptera: Tenebrionidae) on the Tuscan Islands: the dominance of paleogeography over recent geography. Eur J Entomol. 106:415–423.
  • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol. 3:294–299.
  • Gruzova MN, Batalova FM. 1979. [Nuclear structures in the telotrophic ovarioles of nocturnal ground beetles (Tenebrionidae, Polyphaga). II. The oocyte nucleus of Blaps lethifera and Gnaptor spinimanus. Light optical data]. Ontogenez. 10:323–331.
  • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17:754–755.
  • Juan C, Oromi P, Hewitt GM. 1996. Phylogeny of the genus Hegeter (Tenebrionidae, Coleoptera) and its colonization of the Canary Islands deduced from Cytochrome Oxidase I mitochondrial DNA sequences. Heredity (Edinb). 76:392–403.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kergoat GJ, Soldati L, Clamens AL, Jourdan H, Jabbour-Zahab R, Genson G, Bouchard P, Condamine FL. 2014. Higher level molecular phylogeny of darkling beetles (Coleoptera: Tenebrionidae). Syst Entomol. 39:486–499.
  • Kotsakiozi P, Parmakelis A, Giokas S, Papanikolaou I, Valakos ED. 2012. Mitochondrial phylogeny and biogeographic history of the Greek endemic land-snail genus Codringtonia Kobelt 1898 (Gastropoda, Pulmonata, Helicidae). Mol Phylogenet Evol. 62:681–692.
  • Lamb T, Bond JE. 2013. A multilocus perspective on phylogenetic relationships in the Namib darkling beetle genus Onymacris (Tenebrionidae). Mol Phylogenet Evol. 66:757–765.
  • Martinez JC, Ferrer J, Sanchez Gea JF. 2011. Rehabilitación de Gnaptor boryi (Laporte, 1840), buena especie, diferente de Gnaptor spinimanus (Pallas, 1781) (Coleoptera: Tenebrionidae, Blaptini). Boletín de la SEA. 49:243–246.
  • Medvedev GS. 2000. Genera of tenebrionid beetles of the tribe Blaptini (Coleoptrera, Tenebrionidae). Entomol Obozr. 79:643–663.
  • Meštrović N, Mravinac B, Plohl M, Ugarković Đ, Bruvo-Mađarić B. 2006. Preliminary phylogeny of Tribolium beetles (Coleoptera: Tenebrionidae) resolved by combined analysis of mitochondrial genes. Eur J Entomol. 103:709–715.
  • Papadopoulou A, Anastasiou I, Keskin B, Vogler AP. 2009. Comparative phylogeography of tenebrionid beetles in the Aegean archipelago: the effect of dispersal ability and habitat preference. Mol Ecol. 18:2503–2517.
  • Papadopoulou A, Anastasiou I, Vogler AP. 2010. Revisiting the insect mitochondrial molecular clock: the Mid-Aegean trench calibration. Mol Biol Evol. 27:1659–1672.
  • Parmakelis A, Stathi I, Chatzaki M, Simaiakis S, Spanos L, Louis C, Mylonas M. 2006. Evolution of Mesobuthus gibbosus (Brulle, 1832) (Scorpiones: Buthidae) in the northeastern Mediterranean region. Mol Ecol. 15:2883–2894.
  • Posada D. 2008. jModelTest: phylogenetic model averaging. Mol Biol Evol. 25:1253–1256.
  • Poulakakis N, Lymberakis P, Antoniou A, Chalkia D, Zouros E, Mylonas M, Valakos E. 2003. Molecular phylogeny and biogeography of the wall-lizard Podarcis erhardii (Squamata: Lacertidae). Mol Phylogenet Evol. 28:38–46.
  • Poulakakis N, Lymberakis P, Tsigenopoulos CS, Magoulas A, Mylonas M. 2005a. Phylogenetic relationships and evolutionary history of snake-eyed skink Ablepharus kitaibelii (Sauria: Scincidae). Mol Phylogenet Evol. 34:245–256.
  • Poulakakis N, Lymberakis P, Valakos E, Pafilis P, Zouros E, Mylonas M. 2005b. Phylogeography of Balkan wall lizard (Podarcis taurica) and its relatives inferred from mitochondrial DNA sequences. Mol Ecol. 14:2433–2443.
  • Poulakakis N, Lymberakis P, Valakos E, Zouros E, Mylonas M. 2005c. Phylogenetic relationships and biogeography of Podarcis species from the Balkan Peninsula, by Bayesian and maximum likelihood analyses of mitochondrial DNA sequences. Mol Phylogenet Evol. 37:845–857.
  • Poulakakis N, Sfenthourakis S. 2008. Molecular phylogeny and phylogeography of the Greek populations of the genus Orthometopon (Isopoda, Oniscidea) based on mitochondrial DNA sequences. Zool J Linnean Soc. 152:707–715.
  • Psonis N, Vardinoyannis K, Mylonas M, Poulakakis N. 2015. Unraveling the evolutionary history of the Chilostoma Fitzinger, 1833 (Mollusca, Gastropoda, Pulmonata) lineages in Greece. Mol Phylogenet Evol. 91:210–225.
  • Rambaut A. 2006–2009. FigTree v.1.3.1. Tree Figure Drawing Tool. Institute of Evolutionary Biology. UK: University of Edinburgh.
  • Rambaut A, Drummond AJ. 2008. MCMC Trace Analysis Tool. Version v1.5.0, 2003-2009. Available from: http://beast.bio.ed.ac.uk/Tracer
  • Ree RH, Moore BR, Webb CO, Donoghue MJ, Crandall K. 2005. A likelihood framework for inferring the evolution of geographic range on phylogenetic trees. Evolution. 59:2299–2311.
  • Ree RH, Smith SA. 2008. Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Syst Biol. 57:4–14.
  • Sagonas K, Poulakakis N, Lymberakis P, Parmakelis A, Pafilis P, Valakos ED. 2014. Molecular systematics and historical biogeography of the green lizards (Lacerta) in Greece: insights from mitochondrial and nuclear DNA. Mol Phylogenet Evol. 76:144–154.
  • Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual. New York (NY): Cold Spring Harbor Laboratory Press.
  • Simaiakis SM, Dimopoulou A, Mitrakos A, Mylonas M, Parmakelis A. 2012. The evolutionary history of the Mediterranean centipede Scolopendra cingulata (Latreille, 1829) (Chilopoda: Scolopendridae) across the Aegean archipelago. Biol J Linnean Soc. 105:507–521.
  • Simon C, Buckley TR, Frati F, Stewart JB, Beckenbach AT. 2006. Incorporating molecular evolution into phylogenetic analysis, and a new compilation of conserved polymerase chain reaction primers for animal mitochondrial DNA. Annu Rev Ecol Evol Syst. 37:545–579.
  • Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P. 1994. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am. 87:651–701.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688–2690.
  • Swofford DL. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sunderland (MA): Sinauer Associates.
  • Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial-DNA in humans and chimpanzees. Mol Biol Evol. 10:512–526.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 28:2731–2739.
  • Trichas A, Lagkis A, Triantis KA, Poulakakis N, Chatzaki M. 2008. Biogeographic patterns of tenebrionid beetles (Coleoptera, Tenebrionidae) on four island groups in the south Aegean Sea. J Nat Hist. 42:491–511.
  • Tryfonopoulos GA, Thanou EG, Fraguedakis-TsoliS SE, Chondropoulos BP. 2010. New data on the distribution and genetic structure of Greek moles of the genus Talpa (Mammalia, Talpidae). J Zool Syst Evol Res. 48:188–193.
  • Yang Z. 2006. Computational molecular evolution. New York: Oxford University Press. p. 1–357.
  • Yu Y, Harris AJ, Blair C, He XJ. 2015. RASP (Reconstruct Ancestral State in Phylogenies): a tool for historical biogeography. Mol Phylogenet Evol. 87:46–49.
  • Yu Y, Harris AJ, He XJ. 2010. S-DIVA (Statistical Dispersal-Vicariance Analysis): a tool for inferring biogeographic histories. Mol Phylogenet Evol. 56:848–850.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.