Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 30, 2019 - Issue 4
254
Views
4
CrossRef citations to date
0
Altmetric
Article

Phylogenetic position of the presumably extinct slender-billed curlew, Numenius tenuirostris

, , , , & ORCID Icon
Pages 626-631 | Received 30 Nov 2018, Accepted 13 Mar 2019, Published online: 10 Apr 2019

References

  • Ab Razak NA, Rahman MA, Tuen AA. 2016. Phylogenetic relationships of waders (Charadriiformes: Scolopacidae) in sarawak inferred from Cytochrome Oxidase I and Recombinant Activating Gene 1. Sains Malays. 45:1089–1095.
  • Al-Nakeeb K, Petersen TN, Sicheritz-Ponten T. 2017. Norgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data. BMC Bioinformatics. 18:510.
  • Baker AJ, Pereira SL, Paton TA. 2007. Phylogenetic relationships and divergence times of Charadriiformes genera: multigene evidence for the Cretaceous origin of at least 14 clades of shorebirds. Biol Lett. 3:205–209.
  • Björklund M. 1994. Phylogenetic relationships among Charadriiformes: reanalysis of previous data. Auk. 111:825–832.
  • Chu PC. 1995. Phylogenetic reanalysis of Strauch’s osteological data set for the Charadriiformes. Condor. 97:174–196.
  • Cramp S, editor. 1983. The birds of the Western Palearctic. Vol. 3. Waders to Gulls. Oxford (UK), London (UK), New York (NY): Oxford University Press; p. 913.
  • Crockford N. 2009. Can you help find the Slender-billed Curlew? Wader Study Group Bull. 116:62–64.
  • del Hoyo J, Elliott A, Sargatal J, editors. 1996. Handbook of the birds of the world. Vol. 3. Hoatzin to Auks. Barcelona (Spain): Lynx Edicions; p. 821.
  • Delaney S, Scott D, Dodman T, Stroud D, editors. 2009. An atlas of wader populations in Africa and Western Eurasia. Wageningen (Netherlands): Wetlands International; p. 524.
  • Dickinson EC, Remsen JVJ, editors. 2013. The Howard and Moore complete checklist of the birds of the world, volume 1: non-passerines. Vol. 1. Eastbourne (UK): Aves Press; p. 752.
  • Ding G, Zhang H, Zhang D. 2016. The complete mitochondrial genome of Numenius phaeopus (Charadriiformes, Scolopacidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27:3173–3174.
  • Dussex N, von Seth J, Robertson BC, Dalen L. 2018. Full mitogenomes in the critically endangered kakapo reveal major post-glacial and anthropogenic effects on neutral genetic diversity. Genes (Basel). 9:220.
  • Gibson R, Baker A. 2012. Multiple gene sequences resolve phylogenetic relationships in the shorebird suborder Scolopaci (Aves: Charadriiformes). Mol Phylogenet Evol. 64:66–72.
  • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17:754–755.
  • Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, et al. 2013. MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol. 30:2531–2540.
  • Kozlova EV. 1962. Charadriiformes. Suborder Limicolae. In: Ivanov AI, editor. Fauna of the USSR. Birds. Vol. 2, Issue 1, Part 3. Moscow & Leningrad (Russia): USSR Academy of Sciences; p. 434.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Levin B, Simonov E, Rastorguev S, Boulygina E, Sharko F, Tsygankova S, Gabrielyan B, Roubenyan H, Mayden R, Nedoluzhko A. 2018. High-throughput sequencing of the mitochondrial genomes from archived fish scales: an example of the endangered putative species flock of Sevan trout Salmo ischchan. Hydrobiologia. 822:217–228.
  • Nunn GB, Cracraft J. 1996. Phylogenetic relationships among the major lineages of the birds-of-paradise (Paradisaeidae) using mitochondrial DNA gene sequences. Mol Phylogenet Evol. 5:445–459.
  • Orlando L, Ginolhac A, Zhang GJ, Froese D, Albrechtsen A, Stiller M, Schubert M, Cappellini E, Petersen B, Moltke I, et al. 2013. Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse. Nature. 499:74–78.
  • Payevsky VA. 2018. Contribution of Russian zoologists to the collecting and first descriptions of the World avian fauna. Proc Zool Inst. 322:144–159.
  • Peters JL. 1934. Check-list of birds of the world. Vol. 2. Cambridge (MA): Harvard University Press; p. 401.
  • Sharko FS, Rastorguev SM, Boulygina ES, Tsygankova SV, Ibragimova AS, Tikhonov AN, Nedoluzhko AV. 2018. Molecular phylogeny of the extinct Steller's sea cow and other Sirenia species based on their complete mitochondrial genomes. Genomics. S0888-7543(18)30475-0. https://doi.org/10.1016/j.ygeno.2018.10.012.
  • Sibley CG, Ahlquist JE. 1990. Phylogeny and classification of birds: a study in molecular evolution. New Haven (CT): Yale University Press; p. 1080.
  • Sonsthagen S, Tibbitts T, Gill R, Williams I, Talbot S. 2015. Spatial genetic structure of bristle-thighed curlews (Numenius tahitiensis): breeding area differentiation not reflected on the non-breeding grounds. Conserv Genet. 16:223–233.
  • Stamatakis A, Hoover P, Rougemont J. 2008. A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol. 57:758–771.
  • Stepanyan LS. 2003. Conspectus of the ornithological fauna of Russia and adjacent territories (within the borders of the USSR as a historic region). Moscow (Russia): Academkniga; p. 806.
  • Thomas GH, Wills MA, Szekely T. 2004. A supertree approach to shorebird phylogeny. BMC Evol Biol. 4:28.
  • Vaurie C. 1965. The birds of the Palearctic fauna: a systematic reference, non-Passeriformes. London (UK): H.F. & G. Witherby; p. 763.
  • Williams I, Guzzetti BM, Gust JR, Sage GK, Gill RE, Tibbitts TL, Sonsthagen SA, Talbot SL. 2012. Polymorphic microsatellite loci identified through development and cross-species amplification within shorebirds. J Ornithol. 153:593–601.
  • Zink RM, Rohwer S, Andreev AV, Dittmann DL. 1995. Trans-Beringia comparisons of mitochondrial-DNA differentiation in birds. Condor. 97:639–649.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.