Biodiversity of Sargassum (Fucales, Sargassaceae) from Eastern Samar (Philippines) inferred from nuclear ribosomal internal transcribed spacer (ITS) sequence data

References

• ADOBE Inc. (2019). Adobe illustrator. Retrieved from https://adobe.com/products/illustrator.
   Google Scholar
• Agardh, C. A. (1820). Species algarum rite cognitae, cum synonymis, differentiis specificis et descriptionibus succinctis (Vol. 1, pp. 1–168). Lund: Berling.
   Google Scholar
• Agardh, C. A. (1824). Systema algarum (pp. 1–312). Lund: Berling.
   Google Scholar
• Agardh, J. G. (1848). Species genera et ordines algarum, seu descriptiones succinctae specierum, generum et ordinum, quibus algarum regnum constituitur. Volumen primum: algas fucoideas complectens. In C.W.K. Gleerup (pp. 1–363). Lund: Berling.
   Google Scholar
• Agardh, C. A. (1889). Species Sargassorum australiae descriptae et dispositae. öfversigt af Kongl. Svenska Vetenskaps-Adademiens Handlingar, 23, 1–133.
   Google Scholar
• Andrew, N. L., & Viejo, R. M. (1998). Ecological limits to the invasion of Sargassum muticum in northern Spain. Aquatic Botany, 60, 251–263. doi:10.1016/S0304-3770(97)00088-0
   Google Scholar
• Ang, P. O., & Trono, G. C. (1987). The genus Sargassum (Phaeophyta, Sargassaceae) from Balibago, Calatagan, Philippines. Botanica Marina, 30, 387–397. doi:10.1515/botm.1987.30.5.387
   Google Scholar
• Camacho, O., Mattio, L., Draisma, S., Fredericq, S., & Diaz-Pulido, G. (2015). Morphological and molecular assessment of Sargassum (Fucales, Phaeophyceae) from Caribbean Colombia, including the proposal of Sargassum giganteum sp. nov., Sargassum schnetteri comb. nov. and Sargassum section Cladophyllum sect. nov. Systematics and Biodiversity, 13, 105–130. doi:10.1080/14772000.2014.972478
   Google Scholar
• Chan, S. W., Cheang, C. C., Chirapart, A., Gerung, G., & Tharith, C. (2013). Homogeneous population of the brown alga Sargassum polycystum in Southeast Asia: Possible role of recent expansion and asexual propagation. PLoS ONE, 8, e77662. doi:10.1371/journal.pone.0077662
   Google Scholar
• Cho, G. Y., Lee, S. H., & Boo, S. M. (2007). A new brown algal order, Ishigeales (Phaeophyceae), established on the basis of plastid protein-coding rbcL, psaA, and psbA region comparisons. Journal of Phycology, 40, 921–936. doi:10.1111/j.1529-8817.2004.03160.x
   Google Scholar
• Cho, S. M., Lee, S. M., Ko, Y. D., Mattio, L., & Boo, S. M. (2012). Molecular systematic reassessment of Sargassum (Fucales, Phaeophyceae) in Korea using four gene regions. Botanica Marina, 55, 473–484. doi:10.1515/bot-2012-0109
   Google Scholar
• Coyer, J. A., Hoarau, J., Oudot-Le Secq, M. P., Stam, W. T., & Olsen, J. L. (2006). A mtDNA-based phylogeny of the brown algal genus Fucus (Heterokontophyta; Phaeophyta). Heterokontophyta; Phaeophyta. Molecular Phylogenetics and Evolution, 39, 209–222. doi:10.1016/j.ympev.2006.01.019
   Google Scholar
• Coyer, J. A., Smith, G. J., & Andersen, R. A. (2001). Evolution of Macrocystis spp. (Phaeophyceae) as determined by ITS-1 and ITS-2 sequences. Journal of Phycology, 37, 574–585. doi:10.1046/j.1529-8817.2001.037001574.x
   Google Scholar
• Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2012). jModeltest 2: More models, new heuristics and parallel computing. Nature Methods, 9, 772. doi:10.1038/nmeth.2109
   Google Scholar
• De Clerck, O., Leliaert, F., Verbruggen, H., Lane, C. E., De Paula, J. C., Payo, D. A., & Coppejans, E. (2006). A revised classification of the dictyoteae (dictyotales, phaeophyceae) based on rbcL and 26S ribosomal DNA sequence analyses. Journal of Phycology, 42, 1271–1288. doi:10.1111/j.1529-8817.2006.00279.x
   Google Scholar
• Dixon, R. R. M., Mattio, L., Huisman, J. M., Payri, C. E., Bolton, J. J., & Gurgel, F. D. (2014). North meets south – Taxonomic and biogeographic implications of a phylogenetic assessment of Sargassum subgenera Arthrophycus and Bactrophycus (Fucales, Phaeophyceae). Phycologia, 53, 15–22. doi:10.2216/13-173.1
   Google Scholar
• Dumilag, R. V., Yap-Dejeto, L. G., Fabillo, M., & Sison-Mangus, M. (2022). Phylogenetic study of Sargassum polycystum (Sargassaceae, Ochrophyta) in Eastern Samar, Philippines based on the nuclear rDNA sequences. Philippine Journal of Science, 151, 255–260.
   Google Scholar
• Faye, E., Wei Wang, J. H., Kawagichi, S., Shimada, S., & Masuda, M. (2004). Reinstatement of Grateloupia subpectinata (Rhodophyta, Halymeniaceae) based on morphology and rbcL sequences. Phycological Research, 52, 59–67.
   Google Scholar
• Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39, 783–791. doi:10.1111/j.1558-5646.1985.tb00420.x
   Google Scholar
• Ganzon-Fortes, E. T. (2012). A historical account of biodiversity studies on Philippine seaweeds (1800-1999). Coastal Marine Science, 35, 182–201.
   Google Scholar
• Grunow, A. (1915). Additamenta ad cognitionem Sargassorum. Verhandlungen der Kaiserlich-Königlichen Zoologisch-Botanischen Gesellschaft in Wien, 65, 329–448.
   Google Scholar
• Guindon, S., Gascuel, O., & Rannala, B. (2003). A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biology, 52, 696–704. doi:10.1080/10635150390235520
   Google Scholar
• Guiry, M. D., & Guiry, G. M. (2022). AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. Retrieved from http://www.algaebase.org
   Google Scholar
• Ignacio, R. J. N. (2018). Fisheries bureau partly lifts ban on collecting seaweed. Philippines: Business World Publishing. Retrieved from https://www.bworldonline.com/fisheries-bureau-partly-lifts-ban-on-collecting-seaweed/
   Google Scholar
• Kantachumpoo, A., Uwai, S., Noiraksar, T., & Kumatsu, T. (2015). Systematics of marine brown alga Sargassum from Thailand: A preliminary study based on morphological data and nuclear ribosomal internal transcribed spacer 2 (ITS2) sequences. Ocean Science Journal, 50, 251–262. doi:10.1007/s12601-015-0022-4
   Google Scholar
• Kilar, J. A., Hanisak, M. D., & Yoshida, T. (1992). On the expression of phenotypic variability: Why is Sargassum so taxonomically difficult? In I. A. Abbott (Ed.), Taxonomy of economic seaweeds with reference to some Pacific and Western Atlantic species (Vol. III, pp. 95–117). La Jolla, CA, USA: California Sea Grant College.
   Google Scholar
• Langin, K. (2018). Seaweed masses assault Caribbean islands. Science, 360, 1158.
   Google Scholar
• Liu, F., Pang, S., Gao, S., & Shan, T. (2013). Intraspecific genetic analysis, gamete release performance, and growth of Sargassum muticum (Fucales, Phaeophyta) from China. Chinese Journal of Oceanology and Limnology, 31, 1268–1275. doi:10.1007/s00343-013-2314-9
   Google Scholar
• Maddison, W. P., & Maddison, D. R. (2019). Mesquite: A modular system for evolutionary analysis. Version 3.61. Retrieved from http://www.mesquiteproject.org.
   Google Scholar
• Marquez, G. P., Santaiñez, W. J., Trono, J. C., Montaño, M. N., Araki, H., Takeuchi, H., & Hasegawa, T. (2014). Seaweed biomass of the Philippines: Sustainable feedstock for biogas production. Renewable and Sustainable Energy Reviews, 38, 1056–1068. doi:10.1016/j.rser.2014.07.056
   Google Scholar
• Mattio, L., & Payri, C. E. (2009). Taxonomic revision of Sargassum species (Fucales, Phaeophyceae) from New Caledonia based on morphological and molecular analyses. Journal of Phycology, 45, 1374–1388. doi:10.1111/j.1529-8817.2009.00760.x
   Google Scholar
• Mattio, L., & Payri, C. E. (2011). 190 years of Sargassum taxonomy, facing the advent of DNA phylogenies. The Botanical Review, 77, 31–70. doi:10.1007/s12229-010-9060-x
   Google Scholar
• Mattio, L., Payri, C., & Stiger- Pouvreau, V. (2008). Taxonomic revision of Sargassum (Fucales, Phaeophyceae) from French polynesia based on morphological and molecular analyses. Journal of Phycology, 44, 1541–1555. doi:10.1111/j.1529-8817.2008.00597.x
   Google Scholar
• Mattio, L., Payri, C. E., & Verlaque, M. (2009). Taxonomic revision and geographic distribution of the subgenus Sargassum (Fucales, Phaeophyceae) in the Western and Central Pacific islands based on morphological and molecular analyses. Journal of Phycology, 45, 1213–1227. doi:10.1111/j.1529-8817.2009.00737.x
   Google Scholar
• Mattio, L., Payri, C. E., Verlaque, M., & De Reviers, B. (2010). Taxonomic revision of Sargassum sect. Acanthocarpicae (Fucales, Phaeophyceae). Taxon, 59, 896–904. doi:10.1002/tax.593017
   Google Scholar
• Mattio, L., Zubia, M., Loveday, B., Crochelet, E., Duong, N., Payri, C. E. … Bolton, J. J. (2013). Sargassum (Fucales, Phaeophyceae) in Mauritius and Réunion, western Indian Ocean: Taxonomic revision and biogeography using hydrodynamic dispersal models. Phycologia, 52, 578–594. doi:10.2216/13-150.1
   Google Scholar
• Modelo, R. B., & Umezaki, I. (1995). Contribution to the study of the genus Sargassum (Fucales, Phaeophyceae) of the Philippines. Philippine Journal of Science, Special Issue: 1–50.
   Google Scholar
• Modelo, R. B., Umezaki, I., & Liao, L. M. (1998). Morphology of Sargassum corderoi (Phaeophyta, Fucales), a new seaweed species from central Philippines. Algae, 13, 79–83.
   Google Scholar
• Montaño, M. N. E., Rodrigueza, M. R. C., & Balitaan, R. L. (2006). Ethnobotany of Sargassum spp. In the Philippines. Coastal Marine Science, 30, 222–225.
   Google Scholar
• Noiraksar, T., & Ajisaka, T. (2008). Taxonomy and distribution of Sargassum (Phaeophyceae) in the Gulf of Thailand. Journal of Applied Phycology, 20, 963–977. doi:10.1007/s10811-008-9327-3
   Google Scholar
• Noormohammadi, Z., Barki, S. G., Sheidai, M., Rafiee, F., & Gharanjik, B. M. (2011). Morphological diversity of Sargassum species in Iran. Geneconserve, 10, 11–22.
   Google Scholar
• Pang, S. J., Liu, F., Shan, T. F., Gao, S. Q., & Zhang, Z. H. (2009). Cultivation of the brown alga Sargassum horneri: sexual reproduction and seedling production in tank culture under reduced solar irradiance in ambient temperature. Journal of Applied Phycology, 21(4), 413–422.
   Google Scholar
• Phillips, N., Smith, C., & Morden, C. W. (2005). Testing systematic concepts of Sargassum (Fucales, Phaeophyceae) using portions of the rbcLS operon. Phycological Research, 53, 1–10. doi:10.1111/j.1440-183.2005.00368.x
   Google Scholar
• Rodríguez-Martínez, R. E., Medina-Valmaseda, A. E., Blanchon, P., Monroy-Velázquez, L. V., Almazán-Becerril, A., Delgado-Pech, B., and García-Rivas, M. C. (2019). Faunal mortality associated with massive beaching and decomposition of pelagic Sargassum. Marine Pollution Bulletin, 146, 201–205.
   Google Scholar
• Ronquist, F., Teslenko, M., Van der Mark, P., Aures, D. L., Darling, A., Höhna, S. … Huelsenbeck, J. P. (2012). MRBAYES 3.2: Efficient Bayesian phylogenetic inference and model selection across a large model space. Systematic Biology, 61, 539–542. doi:10.1093/sysbio/sys029
   Google Scholar
• Santañez, W. J. E., & Trono, G. C. (2013). Taxonomy of the genus Sargassum (Fucales, Phaeophyceae) from Alabat Island, Quezon, Northeastern Philippines. Science Diliman, 25, 29–50.
   Google Scholar
• Saraya, A., & Trono, G. C. (1982). The marine benthic algae of Santiago Island and adjacent areas in Bolinao, Pangasinan. II. Rhodophyta. Natural and Applied Science Bulletin, 34, 25–83.
   Google Scholar
• Setchell, W. A. (1935). The templeton coker expedition to Western Polynesian and the Melanesian Islands, 1933. Some marine plants of south-eastern Melanesia. Proceedings of the Californian Academy of Science, 21, 259–275.
   Google Scholar
• Siger, V., Horiguchi, T., Yoshida, T., Coleman, A. W., & Masuda, M. (2003). Phylogenetic relationships within the genus Sargassum (Fucales, Phaeophyceae), inferred from ITS-2 nrDNA, with an emphasis on the taxonomic subdivision of the genus. Phycological Research, 51, 1–10. doi:10.1111/j.1440-1835.2003.tb00164.x
   Google Scholar
• Silberfeld, T., Leigh, J. S., Verbruggen, H., Cruaud, C., De Reviers, B., & Rousseau, F. (2010). A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): Investigating the evolutionary nature of the “brown algal crown radiation”. Molecular Phylogenetics and Evolution, 56, 659–674. doi:10.1016/j.ympev.2010.04.020
   Google Scholar
• Stamatakis, A. (2006). RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690. doi:10.1093/bioinformatics/btl446
   Google Scholar
• Swofford, D. L. (2018). PAUP: Phylogenetic analysis using Parsimony, version 4.0a163. Champaign, IL: Natural History Survey.
   Google Scholar
• Trono, G. C. (1978). Notes on some marine benthic algae of Sta. Cruz, Marinduque, Philippines. University of the Philippines Natural Science Research Center Technical Reports, 54, 1–24.
   Google Scholar
• Trono, G. C. (1992). The genus Sargassum in the Philippines. In I. A. Abbott (Ed.), Taxonomy of economic seaweeds with reference to some Pacific and Western Atlantic species . ((Vol. III, pp. 43–94). La Jolla, CA: California Sea Grant College.
   Google Scholar
• Trono, G. C. (1994). New species of Sargassum from the Philippines. In I. A. Abbott (Ed.), Taxonomy of economic seaweeds with reference to some Pacific and Western Atlantic species (Vol. IV, pp. 3–7). La Jolla, CA, USA: California Sea Grant College.
   Google Scholar
• Trono, G. C. (1997). Field guide and atlas of the seaweed resources of the Philippines (pp. 1–306). Philippines: Bookmark.
   Google Scholar
• Trono, G. C., & Ang, P. (1982). Marine benthic algae from Bugsuk Island and vicinity, Palawan, Philippines. Kalikasan Philippine Journal of Biology, 11, 1–26.
   Google Scholar
• Trono, G. C., & De Lara, A. V. (1981). Some marine benthic algae from Cabra and Lubang Islands, Occidental Mindoro, Philippines. Natural and Applied Science Bulletin, 33, 1–49.
   Google Scholar
• Tseng, C. K., & Baoren, L. (1987). Three new species of Sargassum (Fucales, Phaeophyta) from South China. Oceanologia et Limnologia Sinica, 18, 515–522.
   Google Scholar
• Tseng, C. K., & Baoren, L. (1997a). Studies on the glomerulate Sargassum of China: IV. Series of Platycarpae. In I. A. Abbott (Ed.), Taxonomy of economic seaweeds (Vol. VI, pp. 9–25). La Jolla, CA: California Sea Grant College System.
   Google Scholar
• Tseng, C. K., & Baoren, L. (1997b). Studies on the Chinese Sargassum VIII. Four new species in the Series Platycarpae of Glomerulate Sargassum. Oceanologia Et Limnologia Sinica, 28, 483–492.
   Google Scholar
• Tseng, C. K., & Baoren, L. (2002). Studies on the biserrulic Sargassum of China: IV. The Series Plagiophyllae Tseng et Lu. In I. A. Abbott & K. J. Mcdermid (Eds.), Taxonomy of Economic Seaweeds with reference to some Pacific species (Vol. VIII, pp. 11–33). La Jolla, CA, USA: California Sea Grant Program.
   Google Scholar
• Tseng, C. K., & Baoren, L. (1988). Studies on Chinese species of zygocarpic Sargassum. In I. A. Abbott (Ed.), Taxonomy of economic seaweeds with reference to some Pacific and Caribbean species Tseng, C. K., Baoren, L. ((Vol. II, pp. 23–54). La Jolla, CA: California Sea Grant College Program.
   Google Scholar
• Turner, D. (1808). Fucisive plantarum fucorum generi a botanicis ascriptarum icones descriptiones et historia. Fuci, or coloured figures and descriptions of the plants referred by botanists to the genus Fucus (Vol. 1). London, England: J. & A. Arch Cornhill.
   Google Scholar
• Turner, D. (1809). Fucisive plantarum fucorum generi a botanicis ascriptarum icones descriptiones et historia. Fuci, or coloured figures and descriptions of the plants referred by botanists to the genus Fucus (Vol. 2). London, England: J. & A. Arch Cornhill.
   Google Scholar
• Turner, D. (1811). Fucisive plantarum fucorum generi a botanicis ascriptarum icones descriptiones et historia. Fuci, or coloured figures and descriptions of the plants referred by botanists to the genus Fucus (Vol. 3). London, England: J. & A. Arch Cornhill.
   Google Scholar
• Van Hees, D. H., Oslen, Y. S., Mattio, L., Ruiz-Montoya, L., Wernberg, T., & Kendrick, G. A. (2018). Cast adrift: Physiology and dispersal of benthic Sargassum spinuligerum in surface rafts. Limnology and Oceanography, 00, 1–15. doi:10.1002/lno.11057
   Google Scholar
• Yamada, Y. (1931). Notes on some Japanese algae II. Journal of the Faculty of Science, Hokkaido Imperial University, 1, 65–76. 3 figs, plates XVI-XX.
   Google Scholar
• Yamasaki, M., Aono, M., Ogawa, N., Tanaka, K., Imoto, Z., & Nakamura, Y. (2014). Drifting algae and fish: Implications of tropical Sargassum invasion due to ocean warming in western Japan. Estuarine and Coastal Shelf Science, 147, 32–41. doi:10.1016/j.ecss.2014.05.018
   Google Scholar
• Yoshida, T. (1983). Japanese species of Sargassum subgenus Bactrophycus (Phaeophyta, Fucales). Journal of Faculty of Science, Hokkaido University, Series V (Botany), Series V (Botany), 13, 99–246.
   Google Scholar
• Yoshida, T. (1988). Japanese and Taiwanese species of Sargassum subgenus Sargassum. In I.A. Abbott (Ed.), Taxonomy of economic seaweeds with reference to some Pacific and Western Atlantic species (Vol. III, pp. 5–21). La Jolla, CA, USA: California Sea Grant College.
   Google Scholar