Molecular identification of fungal pathogens associated with leaf spot disease of date palms (Phoenix dactylifera)

References

• Abass MH, Hameed MA, Ahmed AN. 2013. First report of Nigrospora sphaerica (Sacc.) Mason as a potential pathogen on date palm (Phoenix dactylifera L.). Can J Plant Pathol. 35:75–80. doi: https://doi.org/10.1080/07060661.2012.732612
   Web of Science ®Google Scholar
• Abdalla MY, Al-Rokibah A, Moretti A, Mulè G. 2000. Pathogenicity of toxigenic Fusarium proliferatum from date palm in Saudi Arabia. Plant Dis. 84:321–324. doi: https://doi.org/10.1094/PDIS.2000.84.3.321
   Google Scholar
• Abdul Sattar MH, Rashid Yassin Ibrahim A, Aulaqi WA. 2012. Occurrence of false smut on date palm (Phoenix dactylifera L.) in the southern coastal plains of Yemen. J Appl Hortic. 14:144–145. doi: https://doi.org/10.37855/jah.2012.v14i02.27
   Google Scholar
• Abedalred EM, Ismail WMH, Abdulmoohsin RG, Al-Karhi MAJ. 2019. First molecular identification of Fusarium fujikuroi causing pollen rot of palm trees (Phoenix dactylifera L.) in Iraq and evaluation efficacy of some nanoparticles against it. IOP Conference Series: Earth and Environmental Science; 2019; Kerbala, Iraq.
   Google Scholar
• Akram Ahmadpour S, Farokhinejad R, Mehrabi-Koushki M. 2017. Further characterization and pathogenicity of Didymella microchlamydospora causing stem necrosis of Morus nigra in Iran. Mycosphere. 8:835–852. doi: https://doi.org/10.5943/mycosphere/8/7/3
   Google Scholar
• Al-Daoude A, Al-Shehadah E, Shoaib A, Jawhar M, Arabi MIE. 2019. Salicylic acid pathway changes in barley plants challenged with either a biotrophic or a necrotrophic pathogen. Cereal Res Commun. 47:324–333. doi: https://doi.org/10.1556/0806.47.2019.04
   Google Scholar
• Al-Jaradi A, Al-Mahmooli I, Janke R, Maharachchikumbura S, Al-Saady N, Al-Sadi AM. 2018. Isolation and identification of pathogenic fungi and oomycetes associated with beans and cowpea root diseases in Oman. PeerJ. 2018:e6064. doi: https://doi.org/10.7717/peerj.6064
   Google Scholar
• Al-Nadabi HH, Maharachchikumbura SSN, Agrama H, Al-Azri M, Nasehi A, Al-Sadi AM. 2018. Molecular characterization and pathogenicity of Alternaria species on wheat and date palms in Oman. Eur J Plant Pathol. 152:577–588. doi: https://doi.org/10.1007/s10658-018-1550-4
   Web of Science ®Google Scholar
• Al-Sadi AM. 2013. Phylogenetic and population genetic analysis of Ceratocystis radicicola infecting date palms. J Plant Pathol. 95:49–57.
   Web of Science ®Google Scholar
• Al-Sadi AM. 2016. Variation in resistance to spot blotch and the aggressiveness of Bipolaris sorokiniana on barley and wheat cultivars. J Plant Pathol. 98:97–103.
   Web of Science ®Google Scholar
• Al-Sadi AM, Al-Jabri AH, Al-Mazroui SS, Al-Mahmooli IH. 2012. Characterization and pathogenicity of fungi and oomycetes associated with root diseases of date palms in Oman. Crop Prot. 37:1–6. doi: https://doi.org/10.1016/j.cropro.2012.02.011
   Web of Science ®Google Scholar
• Al-Sadi AM, Al-Said FA, Al-Jabri AH, Al-Mahmooli IH, Al-Hinai AH, de Cock AWAM. 2011. Occurrence and characterization of fungi and oomycetes transmitted via potting mixtures and organic manures. Crop Prot. 30:38–44.
   Web of Science ®Google Scholar
• Al-Yahyai R, Khan MM. 2015. Date palm status and perspective in Oman. In: Al-Khayri JM, Jain SM, Johnson DV, editors. Date palm Genetic Resources and Utilization. Vol. 2. Dordrecht, The Netherlands, Asia and Europe: Springer; p. 207–240.
   Google Scholar
• Alam MW, Rehman A, Ahmad S, Sarwar M, Nawaz A, Khan SM, Ali S, Aslam S, Mannan A. 2019. First report of Nigrospora sphaerica causing leaf spot of date palm in Pakistan. J Plant Pathol. 102:223.
   Web of Science ®Google Scholar
• Alam MW, Rehman A, Gleason ML, Riaz K, Saira M, Aslam S, Rosli H, Muhammad S. 2017a. First report of Nigrospora sphaerica causing leaf spot of Kinnow mandarin in Pakistan. J Plant Pathol. 99:295.
   Web of Science ®Google Scholar
• Alam MW, Rehman A, Saira M, Kan NA, Aslam S, Fiaz M, Muhammad S. 2017b. First report of leaf spots in Aloe vera caused by Nigrospora oryzae in Pakistan. Plant Dis. 101:841.
   Google Scholar
• Ali Maitlo W, Markhand GS, Abul-Soad AA, Lodhi AM, Jatoi MA. 2013. Chemical control of sudden decline disease of date palm (Phoenix dactylifera L.) in Sindh, Pakistan. Pak J Bot. 45:7–11.
   Web of Science ®Google Scholar
• Arunakumar GS, Gnanesh BN, Supriya M, Sivaprasad V. 2019. First report of Nigrospora sphaerica causing shot hole disease on mulberry in India. Plant Dis. 103:1783.
   Web of Science ®Google Scholar
• Aveskamp MM, Verkley GJM, De Gruyter J, Murace MA, Perelló A, Woudenberg JHC, Groenewald JZ, Crous PW. 2009. DNA phylogeny reveals polyphyly of Phoma section Peyronellaea and multiple taxonomic novelties. Mycologia. 101:363–382.
   PubMed Web of Science ®Google Scholar
• Begum M, Hamza A, Tanny T, Das KC, Mahmud MT, Salimullah M, Alam I. 2018. First report of leaf spot disease in Aloe vera caused by Nigrospora oryzae in Bangladesh. Plant Dis. 102:1461.
   Google Scholar
• Berbee ML, Pirseyedi M, Hubbard S. 1999. Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia. 91:964–977.
   Web of Science ®Google Scholar
• Cao S, Yang N, Zhao C, Liu J, Han C, Wu X. 2018. Diversity of Fusarium species associated with root rot of sugar beet in China. J Gen Plant Pathol. 84:321–329.
   Web of Science ®Google Scholar
• Choi YJ, Lee JS, Lee HB, Kim HJ. 2018. First report of leaf blight caused by Curvularia verruculosa on zoysiagrass (Zoysia japonica) in Korea. Plant Dis. 102:1173.
   Web of Science ®Google Scholar
• Conforto C, Lima NB, Silva FJA, Câmara MPS, Maharachchikumbura S, Michereff SJ. 2019. Characterization of fungal species associated with cladode brown spot on Nopalea cochenillifera in Brazil. Eur J Plant Pathol. 155:1179–1194.
   Web of Science ®Google Scholar
• Cui YP, Wu B, Peng AT, Li ZL, Lin JF, Song XB. 2018. First report of nigrospora leaf blight on sugarcane caused by Nigrospora sphaerica in China. Plant Dis. 102:824.
   Web of Science ®Google Scholar
• de Gruyter H, Woudenberg JHC, Aveskamp MM, Verkley GJM, Groenewald JZ, Crous PW. 2013. Redisposition of Phoma-like anamorphs in pleosporales. Stud Mycol. 75:1–36.
   PubMedGoogle Scholar
• El-Modafar C. 2010. Mechanisms of date palm resistance to Bayoud disease: current state of knowledge and research prospects. Physiol Mol Plant Pathol. 74:287–294.
   Web of Science ®Google Scholar
• FAOSTAT. 2019. 2019 ed.: FAO. Available from http://www.fao.org/faostat/en/#data/QC/visualize.
   Google Scholar
• Fröhlich J, Hyde KD, Guest DI. 1997. Fungi associated with leaf spots of palms in north Queensland, Australia. Mycol Res. 101:721–732.
   Google Scholar
• Ghosh T, Biswas MK, Guin C, Roy P, Aikat K. 2018. A review on seed borne mycoflora associated with different cereal crop seeds and their management. Plant Cell Biotechnol Mol Biol. 19:107–117.
   Google Scholar
• Glass N, Donaldson G. 1995. Development of premier sets designed for use with the PCR to amplify conserved genes from filamentous Ascomycetes. Appl Environ Microbiol. 61:1323–1330.
   PubMed Web of Science ®Google Scholar
• Huang J, Zheng L, Hsiang T. 2005. First report of leaf spot caused by Curvularia verruculosa on Cynodon sp. in Hubei, China. Plant Pathol. 54:253.
   Web of Science ®Google Scholar
• Jayawardena RS, Hyde KD, Jeewon R, Ghobad-Nejhad M, Wanasinghe DN, Liu NG, Phillips AJL, Oliveira-Filho JRC, da Silva GA, Gibertoni TB, et al. 2019. One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019). Fungal Divers. 94:41–129.
   Web of Science ®Google Scholar
• Kee YJ, Hafifi ABM, Huda-Shakirah AR, Wong KL, Jin XL, Siti Nordahliawate MS, Zakaria L, Mohd MH. 2019. First report of reddish brown spot disease of red-fleshed dragon fruit (Hylocereus polyrhizus) caused by Nigrospora lacticolonia and Nigrospora sphaerica in Malaysia. Crop Prot. 122:165–170.
   Web of Science ®Google Scholar
• Khairi MMA. 2015. Date palm status and perspective in Sudan. In: Al-Khayri JM, Jain SM, Johnson DV, editors. Date palm genetic resources and utilization. Vol. 1. Dordrecht, The Netherlands, Africa and the Americas: Springer; p. 169–191.
   Google Scholar
• Khairi MMA, Elhassan MI, Bashab FA. 2010. The status of date palm cultivation and date production in Sudan. Acta Hortic: International Society for Horticultural Science. p. 37–42.
   Google Scholar
• Khierallah HSM, Bader SM, Ibrahim KM, Al-Jboory IJ. 2015. Date palm status and perspective in Iraq. In: Al-Khayri JM, Jain SM, Johnson DV, editors. Date palm genetic resources and utilization. Vol. 2. Dordrecht, The Netherlands, Asia and Europe: Springer; p. 97–152.
   Google Scholar
• Khiralla A, Spina R, Saliba S, Laurain-Mattar D. 2019. Diversity of natural products of the genera Curvularia and Bipolaris. Fungal Biol Rev. 33:101–122.
   Web of Science ®Google Scholar
• Li L, Pan H, Chen MY, Zhang SJ, Zhong CH. 2018. First report of Nigrospora oryzae causing brown/black spot disease of kiwifruit in China. Plant Dis. 102:243.
   Web of Science ®Google Scholar
• Manamgoda DS, Cai L, McKenzie EHC, Crous PW, Madrid H, Chukeatirote E, Shivas RG, Tan YP, Hyde KD. 2012. A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex. Fungal Divers. 56:131–144.
   Web of Science ®Google Scholar
• Mansoori B. 2012. Fusarium proliferatum induces gum in xylem vessels as the cause of date bunch fading in Iran. J Agr Sc Tech. 14:1133–1140.
   Web of Science ®Google Scholar
• Marin-Felix Y, Senwanna C, Cheewangkoon R, Crous PW. 2017. New species and records of Bipolaris and Curvularia from Thailand. Mycosphere. 8:11.
   Web of Science ®Google Scholar
• Mirzaee MR, Tajali H, Javadmosavi SA. 2014. Thielaviopsis paradoxa causing neck bending disease of date palm in Iran. J Plant Pathol. 96:S4.122.
   Google Scholar
• Moslemi A, Ades PK, Groom T, Nicolas ME, Taylor PWJ. 2017. Alternaria infectoria and Stemphylium herbarum, two new pathogens of pyrethrum (Tanacetum cinerariifolium) in Australia. Australas Plant Pathol. 46:91–101.
   Web of Science ®Google Scholar
• O’Donnell K, Cigelnik E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Phylogenet Evol. 7:103–116.
   PubMed Web of Science ®Google Scholar
• Osorio JA, Crous CJ, de Beer ZW, Wingfield MJ, Roux J. 2017. Endophytic Botryosphaeriaceae, including five new species, associated with mangrove trees in South Africa. Fungal Biol. 121:361–393.
   Web of Science ®Google Scholar
• Punja ZK, Scott C, Chen S. 2018. Root and crown rot pathogens causing wilt symptoms on field-grown marijuana (Cannabis sativa L.) plants. Can J Plant Pathol. 40:528–541.
   Web of Science ®Google Scholar
• Qostal S, Kribel S, Chliyeh M, Serghat S, KarimaSelmaoui AOT, Zaarati H, Benkirane R, Douira A. 2019. Study of the fungal complex responsible for root rot of wheat and barley in the north-west of Morocco. Plant Archives. 19:2143–2157.
   Google Scholar
• Raspé O, Vadthanarat S, De Kesel A, Degreef J, Hyde KD, Lumyong S. 2016. Pulveroboletus fragrans, a new Boletaceae species from Northern Thailand, with a remarkable aromatic odor. Mycol Prog. 15:38.
   Web of Science ®Google Scholar
• Raza M, Zhang ZF, Hyde KD, Diao YZ, Cai L. 2019. Culturable plant pathogenic fungi associated with sugarcane in southern China. Fungal Divers. 99:1–104.
   Web of Science ®Google Scholar
• Sabburg R, Obanor F, Aitken E, Chakraborty S. 2015. Changing fitness of a necrotrophic plant pathogen under increasing temperature. Glob Change Biol. 21:3126–3137.
   Web of Science ®Google Scholar
• Saeed EE, Sham A, El-Tarabily K, Elsamen FA, Iratni R, Abuqamar SF. 2016. Chemical control of black scorch disease on date palm caused by the fungal pathogen Thielaviopsis punctulata in United Arab Emirates. Plant Dis. 100:2370–2376.
   Web of Science ®Google Scholar
• Saleh AA, Sharafaddin AH, El-Komy MH, Ibrahim YE, Hamad YK, Molan YY. 2017. Fusarium species associated with date palm in Saudi Arabia. Eur J Plant Pathol. 148:367–377.
   Web of Science ®Google Scholar
• Samson RA, Visagie CM, Houbraken J, Hong S-B, Hubka V, Klaasen CHW, Perrone G, Seifert KA, Susca A, Tanney JB, et al. 2014. Phylogeny, identification and nomenclature of the genus Aspergillus. Stud Mycol. 78:141–173.
   PubMed Web of Science ®Google Scholar
• Sarr MP, Ndiaye M, Groenewald JZ, Crous PW. 2014. Genetic diversity in Macrophomina phaseolina, the causal agent of charcoal rot. Phytopathol Mediterr. 53:250–268.
   Web of Science ®Google Scholar
• Senanayake IC, Maharachchikumbura SSN, Jeewon R, Promputtha I, Al-Sadi AM, Camporesi E, Hyde KD. 2017. Morphophylogenetic study of Sydowiellaceae reveals several new genera. Mycosphere. 8:15.
   Web of Science ®Google Scholar
• Shan LY, Cui WY, Zhang DD, Zhang J, Ma NN, Bao YM, Dai XF, Guo W. 2017. First report of Fusarium brachygibbosum causing maize stalk rot in China. Plant Dis. 101:837.
   Google Scholar
• Shikur Gebremariam E, Sharma-Poudyal D, Paulitz TC, Erginbas-Orakci G, Karakaya A, Dababat AA. 2018. Identity and pathogenicity of Fusarium species associated with crown rot on wheat (Triticum spp.) in Turkey. Eur J Plant Pathol. 150:387–399.
   Web of Science ®Google Scholar
• Shirsath LP, Patil SP, Patil UK. 2018. Incidence of leaf spot disease on cotton caused by Curvularia verruculosa and role of its hydrolytic enzymes in pathogenesis. Physiol Mol Biol Pla. 24:711–714.
   Web of Science ®Google Scholar
• Silvestro D, Michalak I. 2012. RaxmlGUI: a graphical front-end for RAxML. Org Divers Evol. 12:335–337.
   Web of Science ®Google Scholar
• Wang M, Liu F, Crous PW, Cai L. 2017. Phylogenetic reassessment of Nigrospora: ubiquitous endophytes, plant and human pathogens. Persoonia: Mol Phyl Evol Fungi. 39:118–142.
   PubMed Web of Science ®Google Scholar
• Woudenberg JHC, Groenewald JZ, Binder M, Crous PW. 2013. Alternaria redefined. Stud Mycol. 75:171–212.
   PubMed Web of Science ®Google Scholar
• Woudenberg JHC, Seidl MF, Groenewald JZ, de Vries M, Stielow JB, Thomma BPHJ, Crous PW. 2015. Alternaria section Alternaria: species, formae speciales or pathotypes? Stud Mycol. 82:1–21.
   PubMed Web of Science ®Google Scholar
• Zhang QH, Huang LL, Liu YJ, Ai Y, Peng DH. 2018. First report of leaf spot of lotus (Nelumbo nucifera) caused by Nigrospora oryzae in China. Plant Dis. 102:1038.
   Web of Science ®Google Scholar
• Zhu X, Zhao J, Abbas HMK, Liu Y, Cheng M, Huang J, Cheng W, Wang B, Bai C, Wang G, et al. 2018. Pyramiding of nine transgenes in maize generates high-level resistance against necrotrophic maize pathogens. Theor Appl Genet. 131:2145–2156.
   Web of Science ®Google Scholar