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Epidemiology, Genetics & Genomic

The mitochondrial genome of Ectropis dentilineata Moore, 1868 (Lepidoptera: Geometridae) from tea plantations in Guizhou province, China

Zhaohe Lua Institute of Insect Sciences, Zhejiang University, Hangzhou, People’s Republic of ChinaView further author information
,
Ruizhong Yuana Institute of Insect Sciences, Zhejiang University, Hangzhou, People’s Republic of ChinaView further author information
,
Pu Tanga Institute of Insect Sciences, Zhejiang University, Hangzhou, People’s Republic of China;c Lab for Lingnan Modern Agriculture, Guangzhou, People’s Republic of China;d Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Zhejiang University, Hangzhou, People’s Republic of ChinaView further author information
,
Zhizhi Wanga Institute of Insect Sciences, Zhejiang University, Hangzhou, People’s Republic of China;c Lab for Lingnan Modern Agriculture, Guangzhou, People’s Republic of China;d Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Zhejiang University, Hangzhou, People’s Republic of ChinaCorrespondence[email protected] [email protected]
View further author information
,
Xiaogui Zhoub Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, People’s Republic of ChinaCorrespondence[email protected] [email protected]
View further author information
&
Xuexin Chena Institute of Insect Sciences, Zhejiang University, Hangzhou, People’s Republic of China;c Lab for Lingnan Modern Agriculture, Guangzhou, People’s Republic of China;d Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Zhejiang University, Hangzhou, People’s Republic of ChinaView further author information
Article: 2246665 | Received 13 Mar 2023, Accepted 04 Aug 2023, Published online: 17 Aug 2023

References

  • Ashfaq MA, Rafi MAS, Mansoor S, Hebert PDN. 2017. Mapping global biodiversity connections with DNA barcodes: Lepidoptera of Pakistan. PLoS ONE. 12:e0174749. doi:10.1371/journal.pone.0174749.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Son P, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19:455–477. doi:10.1089/cmb.2012.0021.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120. doi:10.1093/bioinformatics/btu170.
  • Clary DO, Wolstenholme DR. 1985. The mitochondrial-DNA molecule of Drosophila-yakuba - nucleotide-sequence, gene organization, and genetic-code. J Mol Evol. 22:252–271. doi:10.1007/BF02099755.
  • Crampton-Platt A, Timmermans MJTN, Gimmel ML, Kutty SN, Cockerill TD, Khen CV, Vogler AP. 2015. Soup to tree: the phylogeny of beetles inferred by mitochondrial metagenomics of a bornean rainforest sample. Mol Biol Evol. 32:2302–2316. doi:10.1093/molbev/msv111.
  • Dai LS, Kausar S, Abbas MN, Wang TT. 2018. Complete sequence and characterization of the Ectropis oblique mitochondrial genome and its phylogenetic implications. Int J Biol Macromol. 107(Pt A):1142–1150.
  • Mitter C, Davis DR, Cummings MP. 2017. Phylogeny and evolution of lepidoptera. Annu Rev Entomol. 62:265–283. doi:10.1146/annurev-ento-031616-035125.
  • Moore F. 1867. On the Lepidopterous insects of bengal. Proc Zool Soc Lond. 35(1):612–686.
  • Peng Y, Leung HCM, Yiu SM, Chin FYL. 2012. IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics. 28:1420–1428. doi:10.1093/bioinformatics/bts174.
  • Ratnasingham S, Hebert PDN. 2007. BOLD: the barcode of life data system (www.barcodinglife.org). Mol Ecol Notes. 7:355–364.
  • Sihvonen P, Mutanen M, Kaila L, Brehm G, Hausmann A, Staude HS. 2011. Comprehensive molecular sampling yields a robust phylogeny for Geometrid moths (Lepidoptera: Geometridae). PLoS ONE. 6:e20356. doi:10.1371/journal.pone.0020356.
  • Song XH, Yang TB, Xu XQ, Yan XH, Zhou CQ. 2021. Characterization of the complete mitochondrial genome of Ectropis grisescens (Lepidoptera, Geometridae). Mitochondrial DNA B Resour. 14;6(7):1953–1955. doi:10.1080/23802359.2021.1923423.
  • Strutzenberger P, Brehm G, Fiedler K. 2012. DNA barcode sequencing from old type specimens as a tool in taxonomy: a case study in the diverse genus Eois (Lepidoptera: Geometridae). PLoS ONE. 7:e0049710. doi:10.1371/journal.pone.0049710.
  • Timmermans MJTN, Lees DC, Simonsen TJ. 2014. Towards a mitogenomic phylogeny of Lepidoptera. Mol Phylogenet Evol. 79:169–178. doi:10.1016/j.ympev.2014.05.031.
  • Wingett SW, Andrews S. 2018. Fastq Screen: a tool for multi-genome mapping and quality control. F1000Res. 7:1338–1338. doi:10.12688/f1000research.15931.1.

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