ZBP2 Facilitates Binding of ZBP1 to β-Actin mRNA during Transcription

REFERENCES

• Adams, M. D., R. S. Tarng, and D. C. Rio. 1997. The alternative splicing factor PSI regulates P-element third intron splicing in vivo. Genes. Dev. 11:129–138.
   PubMedGoogle Scholar
• Amarasinghe, A. K., R. MacDiarmid, M. D. Adams, and D. C. Rio. 2001. An in vitro-selected RNA-binding site for the KH domain protein PSI acts as a splicing inhibitor element. RNA 7:1239–1253.
   PubMed Web of Science ®Google Scholar
• Bassell, G. J., and R. H. Singer. 2001. Neuronal RNA localization and the cytoskeleton. Probl. Cell Differ. 34:41–56.
   PubMedGoogle Scholar
• Bassell, G. J., H. Zhang, A. L. Byrd, A. M. Femino, R. H. Singer, K. L. Taneja, L. M. Lifshitz, I. M. Herman, and K. S. Kosik. 1998. Sorting of beta-actin mRNA and protein to neurites and growth cones in culture. J. Neurosci. 18:251–265.
   PubMed Web of Science ®Google Scholar
• Carey, J., V. Cameron, P. L. de Haseth, and O. C. Uhlenbeck. 1983. Sequence-specific interaction of R17 coat protein with its ribonucleic acid binding site. Biochemistry 22:2601–2610.
   PubMed Web of Science ®Google Scholar
• Chen, C. Y., R. Gherzi, S. E. Ong, E. L. Chan, R. Raijmakers, G. J. Pruijn, G. Stoecklin, C. Moroni, M. Mann, and M. Karin. 2001. AU binding proteins recruit the exosome to degrade ARE-containing mRNAs. Cell 107:451–464.
   PubMed Web of Science ®Google Scholar
• Chen, C. Y., N. Xu, W. Zhu, and A. B. Shyu. 2004. Functional dissection of hnRNP D suggests that nuclear import is required before hnRNP D can modulate mRNA turnover in the cytoplasm. RNA 10:669–680.
   PubMedGoogle Scholar
• Chen, T., B. B. Damaj, C. Herrera, P. Lasko, and S. Richard. 1997. Self-association of the single-KH-domain family members Sam68, GRP33, GLD-1, and Qk1: role of the KH domain. Mol. Cell. Biol. 17:5707–5718.
   PubMedGoogle Scholar
• Conrad, R. C., S. Baskerville, and A. D. Ellington. 1995. In vitro selection methodologies to probe RNA function and structure. Mol. Divers. 1:69–78.
   PubMedGoogle Scholar
• Cote, C. A., D. Gautreau, J. M. Denegre, T. L. Kress, N. A. Terry, and K. L. Mowry. 1999. A Xenopus protein related to hnRNP I has a role in cytoplasmic RNA localization. Mol. Cell 4:431–437.
   PubMed Web of Science ®Google Scholar
• Custodio, N., C. Carvalho, I. Condado, M. Antoniou, B. J. Blencowe, and M. Carmo-Fonseca. 2004. In vivo recruitment of exon junction complex proteins to transcription sites in mammalian cell nuclei. RNA 10:622–633.
   PubMed Web of Science ®Google Scholar
• Czaplinski, K., T. Kocher, M. Schelder, A. Segref, M. Wilm, and I. W. Mattaj. 2005. Identification of 40LoVe, a Xenopus hnRNP D family protein involved in localizing a TGF-beta-related mRNA during oogenesis. Dev. Cell 8:505–515.
   PubMedGoogle Scholar
• Davis-Smyth, T., R. C. Duncan, T. Zheng, G. Michelotti, and D. Levens. 1996. The far upstream element-binding proteins comprise an ancient family of single-strand DNA-binding transactivators. J. Biol. Chem. 271:31679–31687.
   PubMedGoogle Scholar
• Duncan, R., L. Bazar, G. Michelotti, T. Tomonaga, H. Krutzsch, M. Avigan, and D. Levens. 1994. A sequence-specific, single-strand binding protein activates the far upstream element of c-myc and defines a new DNA-binding motif. Genes Dev. 8:465–480.
   PubMedGoogle Scholar
• Elbashir, S. M., J. Harborth, W. Lendeckel, A. Yalcin, K. Weber, and T. Tuschl. 2001. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411:494–498.
   PubMed Web of Science ®Google Scholar
• Elbashir, S. M., J. Harborth, K. Weber, and T. Tuschl. 2002. Analysis of gene function in somatic mammalian cells using small interfering RNAs. Methods 26:199–213.
   PubMed Web of Science ®Google Scholar
• Ellington, A. D., and J. W. Szostak. 1990. In vitro selection of RNA molecules that bind specific ligands. Nature 346:818–822.
   PubMed Web of Science ®Google Scholar
• Farina, K. L., S. Huttelmaier, K. Musunuru, R. Darnell, and R. H. Singer. 2003. Two ZBP1 KH domains facilitate beta-actin mRNA localization, granule formation, and cytoskeletal attachment. J. Cell Biol. 160:77–87.
   PubMed Web of Science ®Google Scholar
• Farina, K. L., and R. H. Singer. 2002. The nuclear connection in RNA transport and localization. Trends Cell Biol. 12:466–472.
   PubMedGoogle Scholar
• Gherzi, R., K. Y. Lee, P. Briata, D. Wegmuller, C. Moroni, M. Karin, and C. Y. Chen. 2004. A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery. Mol. Cell 14:571–583.
   PubMed Web of Science ®Google Scholar
• Gherzi, R., M. Trabucchi, M. Ponassi, T. Ruggiero, G. Corte, C. Moroni, C. Y. Chen, K. S. Khabar, J. S. Andersen, and P. Briata. 2006. The RNA-binding protein KSRP promotes decay of beta-catenin mRNA and is inactivated by PI3K-AKT signaling. PLoS Biol. 5:e5.
   PubMed Web of Science ®Google Scholar
• Goodrich, J. S., K. N. Clouse, and T. Schupbach. 2004. Hrb27C, Sqd and Otu cooperatively regulate gurken RNA localization and mediate nurse cell chromosome dispersion in Drosophila oogenesis. Development 131:1949–1958.
   PubMedGoogle Scholar
• Gu, W., F. Pan, H. Zhang, G. J. Bassell, and R. H. Singer. 2002. A predominantly nuclear protein affecting cytoplasmic localization of beta-actin mRNA in fibroblasts and neurons. J. Cell Biol. 156:41–51.
   PubMedGoogle Scholar
• Hachet, O., and A. Ephrussi. 2004. Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization. Nature 428:959–963.
   PubMed Web of Science ®Google Scholar
• Hall, M. P., S. Huang, and D. L. Black. 2004. Differentiation-induced colocalization of the KH-type splicing regulatory protein with polypyrimidine tract binding protein and the c-src pre-mRNA. Mol. Biol. Cell 15:774–786.
   PubMedGoogle Scholar
• Hamprecht, B., T. Glaser, G. Reiser, E. Bayer, and F. Propst. 1985. Culture and characteristics of hormone-responsive neuroblastoma X glioma hybrid cells. Methods Enzymol. 109:316–341.
   PubMedGoogle Scholar
• Huang, S. 2000. Perinucleolar structures. J. Struct. Biol. 129:233–240.
   PubMedGoogle Scholar
• Huttelmaier, S., D. Zenklusen, M. Lederer, J. Dictenberg, M. Lorenz, X. Meng, G. J. Bassell, J. Condeelis, and R. H. Singer. 2005. Spatial regulation of beta-actin translation by Src-dependent phosphorylation of ZBP1. Nature 438:512–515.
   PubMed Web of Science ®Google Scholar
• Huynh, J. R., and D. St Johnston. 2004. The origin of asymmetry: early polarisation of the Drosophila germline cyst and oocyte. Curr. Biol. 14:R438–R449.
   PubMed Web of Science ®Google Scholar
• Johnstone, O., and P. Lasko. 2001. Translational regulation and RNA localization in Drosophila oocytes and embryos. Annu. Rev. Genet. 35:365–406.
   PubMedGoogle Scholar
• Kindler, S., H. Wang, D. Richter, and H. Tiedge. 2005. RNA transport and local control of translation. Annu. Rev. Cell Dev. Biol. 21:223–245.
   PubMedGoogle Scholar
• Kislauskis, E. H., X. Zhu, and R. H. Singer. 1997. Beta-actin messenger RNA localization and protein synthesis augment cell motility. J. Cell Biol. 136:1263–1270.
   PubMedGoogle Scholar
• Kislauskis, E. H., X. Zhu, and R. H. Singer. 1994. Sequences responsible for intracellular localization of beta-actin messenger RNA also affect cell phenotype. J. Cell Biol. 127:441–451.
   PubMedGoogle Scholar
• Kress, T. L., Y. J. Yoon, and K. L. Mowry. 2004. Nuclear RNP complex assembly initiates cytoplasmic RNA localization. J. Cell Biol. 165:203–211.
   PubMedGoogle Scholar
• Kroll, T. T., W. M. Zhao, C. Jiang, and P. W. Huber. 2002. A homolog of FBP2/KSRP binds to localized mRNAs in Xenopus oocytes. Development 129:5609–5619.
   PubMedGoogle Scholar
• Labourier, E., M. Blanchette, J. W. Feiger, M. D. Adams, and D. C. Rio. 2002. The KH-type RNA-binding protein PSI is required for Drosophila viability, male fertility, and cellular mRNA processing. Genes Dev. 16:72–84.
   PubMedGoogle Scholar
• Latham, V. M., E. H. Yu, A. N. Tullio, R. S. Adelstein, and R. H. Singer. 2001. A Rho-dependent signaling pathway operating through myosin localizes beta-actin mRNA in fibroblasts. Curr. Biol. 11:1010–1016.
   PubMedGoogle Scholar
• Lellek, H., R. Kirsten, I. Diehl, F. Apostel, F. Buck, and J. Greeve. 2000. Purification and molecular cloning of a novel essential component of the apolipoprotein B mRNA editing enzyme-complex. J. Biol. Chem. 275:19848–19856.
   PubMedGoogle Scholar
• Long, R. M., R. H. Singer, X. Meng, I. Gonzalez, K. Nasmyth, and R. P. Jansen. 1997. Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA. Science 277:383–387.
   PubMedGoogle Scholar
• Lyford, G. L., K. Yamagata, W. E. Kaufmann, C. A. Barnes, L. K. Sanders, N. G. Copeland, D. J. Gilbert, N. A. Jenkins, A. A. Lanahan, and P. F. Worley. 1995. Arc, a growth factor and activity-regulated gene, encodes a novel cytoskeleton-associated protein that is enriched in neuronal dendrites. Neuron 14:433–445.
   PubMed Web of Science ®Google Scholar
• Min, H., C. W. Turck, J. M. Nikolic, and D. L. Black. 1997. A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer. Genes Dev. 11:1023–1036.
   PubMedGoogle Scholar
• Oleynikov, Y., and R. H. Singer. 2003. Real-time visualization of ZBP1 association with beta-actin mRNA during transcription and localization. Curr. Biol. 13:199–207.
   PubMed Web of Science ®Google Scholar
• Oleynikov, Y., and R. H. Singer. 1998. RNA localization: different zipcodes, same postman? Trends Cell Biol. 8:381–383.
   PubMedGoogle Scholar
• Palacios, I. M., and D. St Johnston. 2001. Getting the message across: the intracellular localization of mRNAs in higher eukaryotes. Annu. Rev. Cell Dev. Biol. 17:569–614.
   PubMed Web of Science ®Google Scholar
• Rehbein, M., K. Wege, F. Buck, M. Schweizer, D. Richter, and S. Kindler. 2002. Molecular characterization of MARTA1, a protein interacting with the dendritic targeting element of MAP2 mRNAs. J. Neurochem. 82:1039–1046.
   PubMedGoogle Scholar
• Richelson, E. 1973. Regulation of tyrosine hydroxylase activity in mouse neuroblastoma clone N1E-115. J. Neurochem. 21:1139–1145.
   PubMedGoogle Scholar
• Ross, A. F., Y. Oleynikov, E. H. Kislauskis, K. L. Taneja, and R. H. Singer. 1997. Characterization of a beta-actin mRNA zipcode-binding protein. Mol. Cell. Biol. 17:2158–2165.
   PubMed Web of Science ®Google Scholar
• Shestakova, E. A., R. H. Singer, and J. Condeelis. 2001. The physiological significance of beta-actin mRNA localization in determining cell polarity and directional motility. Proc. Natl. Acad. Sci. USA 98:7045–7050.
   PubMedGoogle Scholar
• Snee, M., G. J. Kidd, T. P. Munro, and R. Smith. 2002. RNA trafficking and stabilization elements associate with multiple brain proteins. J. Cell Sci. 115:4661–4669.
   PubMedGoogle Scholar
• Takizawa, P. A., A. Sil, J. R. Swedlow, I. Herskowitz, and R. D. Vale. 1997. Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast. Nature 389:90–93.
   PubMed Web of Science ®Google Scholar
• Yano, T., S. Lopez de Quinto, Y. Matsui, A. Shevchenko, and A. Ephrussi. 2004. Hrp48, a Drosophila hnRNPA/B homolog, binds and regulates translation of oskar mRNA. Dev. Cell 6:637–648.
   PubMed Web of Science ®Google Scholar
• Yao, J., Y. Sasaki, Z. Wen, G. J. Bassell, and J. Q. Zheng. 2006. An essential role for beta-actin mRNA localization and translation in Ca2+-dependent growth cone guidance. Nat. Neurosci. 9:1265–1273.
   PubMed Web of Science ®Google Scholar
• Zhang, H. L., T. Eom, Y. Oleynikov, S. M. Shenoy, D. A. Liebelt, J. B. Dictenberg, R. H. Singer, and G. J. Bassell. 2001. Neurotrophin-induced transport of a beta-actin mRNP complex increases beta-actin levels and stimulates growth cone motility. Neuron 31:261–275.
   PubMed Web of Science ®Google Scholar
• Zhang, H. L., R. H. Singer, and G. J. Bassell. 1999. Neurotrophin regulation of beta-actin mRNA and protein localization within growth cones. J. Cell Biol. 147:59–70.
   PubMedGoogle Scholar