Conversion at Large Intergenic Regions of Mitochondrial DNA in Saccharomyces cerevisiae

Literature Cited

• Baldacci, G., B. Cherif-Zahar, and G. Bernardi. 1984. The initiation of DNA replication in the mitochondrial genome of yeast. EMBO J. 3:2115–2120.
   PubMedGoogle Scholar
• Blanc, H., and B. Dujon. 1980. Replicator regions of the yeast mitochondrial DNA responsible for suppressiveness. Proc. Natl. Acad. Sci. USA 77:3942–3946.
   PubMed Web of Science ®Google Scholar
• Clark-Walker, G. D. 1989. In vivo rearrangement of mitochondrial DNA in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 86:8847–8851.
   PubMedGoogle Scholar
• Clark-Walker, G. D., R. J. Evans, P. Hoben, and C. R. McArthur. 1985. The basis of diversity in yeast mitochondrial DNAs, p. 71–78. In E. Quagliariello, E. C. Slater, F. Palmiere, C. Saccone, and A. M. Kroon (ed.), Achievements and perspectives in mitochondrial research, vol. 2. Biogenesis. Elsevier Science Publishers B.V., Amsterdam.
   Google Scholar
• Clark-Walker, G. D., C. R. McArthur, and K. S. Sriprakash. 1981. Partial duplication of the large ribosomal RNA sequence in an inverted repeat in circular mitochondrial DNA from Kloekera africana. Implications for mechanisms of the petite mutation. J. Mol. Biol. 147:399–415.
   PubMedGoogle Scholar
• Clark-Walker, G. D., K. A. Sriprakash, C. R. McArthur, and A. A. Azad. 1980. Mapping of mitochondrial DNA from Torulopsis glabrata. Location of ribosomal and transfer RNA genes. Curr. Genet. 1:209–217.
   PubMedGoogle Scholar
• Colleaux, L., L. d'Auriol, F. Galibert, and B. Dujon. 1988. Recognition and cleavage site of the intron-encoded omega transposase. Proc. Natl. Acad. Sci. USA 85:6022–6026.
   PubMed Web of Science ®Google Scholar
• deZamaroczy, M., and G. Bernardi. 1985. Sequence organization of the mitochondrial genome of yeast—a review. Gene 37:1–17.
   PubMedGoogle Scholar
• deZamaroczy, M., and G. Bernardi. 1986. The GC clusters of the mitochondrial genome of yeast and their evolutionary origin. Gene 41:1–22.
   PubMedGoogle Scholar
• deZamaroczy, M., and G. Bernardi. 1986. The primary structure of the mitochondrial genome of Saccharomyces cerevisiae—a review. Gene 47:155–177.
   PubMedGoogle Scholar
• deZamaroczy, M., G. Faugeron-Fonty, and G. Bernardi. 1983. Excision sequences in the mitochondrial genome of yeast. Gene 21:193–202.
   PubMedGoogle Scholar
• deZamaroczy, M., G. Faugeron-Fonty, G. Baldacci, R. Goursot, and G. Bernardi. 1984. The ori sequences of the mitochondrial genome of a wild-type yeast strain: number, location, orientation and structure. Gene 32:439–457.
   PubMedGoogle Scholar
• deZamaroczy, M., R. Maritta, G. Faugeron-Fonty, R. Goursot, M. Mangin, G. Baldacci, and G. Bernardi. 1981. The origins of replication of the yeast mitochondrial genome and the phenomenon of suppressivity. Nature (London) 292:75–78.
   PubMedGoogle Scholar
• Dieckmann, C. L., and B. Gandy. 1987. Preferential recombination between GC clusters in yeast mitochondrial DNA. EMBO j. 6:4197–4203.
   PubMedGoogle Scholar
• Ephrussi, Β., H. de Margerie-Hottinguer, and H. Roman. 1955. Suppressiveness: a new factor in the genetic determinism of the synthesis of respiratory enzymes in yeast. Proc. Natl. Acad. Sci. USA 41:1065–1071.
   PubMed Web of Science ®Google Scholar
• Evans, R. J., and G. D. Clark-Walker. 1985. Elevated levels of petite formation in strains of Saccharomyces cerevisiae restored to respiratory competence. II. Organization of mitochondrial genomes in strains having high and moderate frequencies of petite mutant formation. Genetics 111:403–432.
   PubMedGoogle Scholar
• Evans, R. J., K. M. Oakley, and G. D. Clark-Walker. 1985. Elevated levels of petite formation in strains of Saccharomyces cerevisiae restored to respiratory competence. 1. Association of both high and moderate frequencies of petite formation with the presence of aberrant mitochondrial DNA. Genetics 111:389–402.
   PubMedGoogle Scholar
• Faugeron-Fonty, G., and C. Goyon. 1985. Polymorphic variations in the ori sequences from the mitochondrial genomes of different wild-type yeast strains. Curr. Genet. 10:269–282.
   PubMedGoogle Scholar
• Faugeron-Fonty, G., C. Le Van Kim, M. deZamaroczy, R. Goursot, and G. Bernardi. 1984. A comparative study of the ori sequences from the mitochondrial genomes of twenty wild-type yeast strains. Gene 32:459–473.
   PubMedGoogle Scholar
• Gaillard, C., F. Strauss, and G. Bernardi. 1980. Excision sequences in the mitochondrial genome of yeast. Nature (London) 283:218–220.
   PubMedGoogle Scholar
• Henikoff, S. 1984. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28:351–359.
   PubMed Web of Science ®Google Scholar
• Macino, G., and A. Tzagoloff. 1980. Assembly of the mitochondrial membrane system: sequence analysis of a yeast mitochondrial ATPase gene containing the oli-2 and oli-4 loci. Cell 20:507–517.
   PubMed Web of Science ®Google Scholar
• Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Maxwell, R. J., R. J. Devenish, and P. Nagley. 1986. The nucleotide sequence of the mitochondrial genome of an abundant petite mutant of Saccharomyces cerevisiae carrying the oril replication origin. Biochem. Int. 13:101–107.
   PubMedGoogle Scholar
• McClelland, M., J. Hanish, M. Nelson, and Y. Patel. 1988. KGB: a single buffer for all restriction endonucleases. Nucleic Acids Res. 16:364.
   PubMedGoogle Scholar
• Piskur, J. 1988. A 5 kb intergenic region containing oril in the mitochondrial DNA of Saccharomyces cerevisiae is dispensable for expression of the respiratory phenotype. FEBS Lett. 229:145–149.
   PubMedGoogle Scholar
• Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
   PubMed Web of Science ®Google Scholar
• Seraphin, B., M. Simon, and G. Faye. 1987. The mitochondrial reading frame RF3 is a function gene in Saccharomyces uvarum. J. Biol. Chem. 262:10146–10153.
   PubMedGoogle Scholar
• Strausberg, R. L., and R. A. Butow. 1981. Gene conversion at the varl locus on yeast mitochondrial DNA. Proc. Natl. Acad. Sci. USA 78:494–498.
   PubMedGoogle Scholar
• Weiller, G., C. M. E. Schueller, and R. J. Schweyen. 1989. Putative target sites for mobile G+C clusters in yeast mitochondrial DNA: single elements and tandem arrays. Mol. Gen. Genet. 218:272–283.
   PubMedGoogle Scholar
• Wenzlau, J. M., R. J. Saldanha, R. A. Butow, and P. S. Perlman. 1989. A latent intron-encoded maturase is also an endonuclease needed for intron mobility. Cell 56:421–430.
   PubMedGoogle Scholar
• Zinn, A. R., and R. A. Butow. 1985. Nonreciprocal exchange between alleles of the yeast mitochondrial 21S rRNA gene: kinetics and involvement of a double-strand break. Cell 40:887–895.
   PubMedGoogle Scholar
• Zinn, A. R., J. K. Pohlman, P. S. Perlman, and R. A. Butow. 1988. In vivo double-strand breaks occur at recombinogenic G+C rich sequences in the yeast mitochondrial genome. Proc. Natl. Acad. Sci. USA 85:2686–2690.
   PubMed Web of Science ®Google Scholar