A Collection of mRNA Species That Are Inducible in the RAW 264.7 Mouse Macrophage Cell Line by Gamma Interferon and Other Agents

REFERENCES

• Adams, D. O., and T. A. Hamilton. 1984. The cell biology of macrophage activation. Ann. Rev. Immunol. 2:283–318.
   PubMed Web of Science ®Google Scholar
• Aguet, Μ., Z. Dembic, and G. Merlin. 1988. Molecular cloning and expression of the human interferon-y receptor. Cell 55:273–280.
   PubMed Web of Science ®Google Scholar
• Alexander, P., and R. Evans. 1971. Endotoxin and double stranded RNA render macrophages cytotoxic. Nature (London) New Biol. 232:76–78.
   PubMedGoogle Scholar
• Arenander, A. T., R. W. Lim, B. C. Varnum, R. Cole, J. de Vellis, and H. R. Herschman. 1989. TIS gene expression in cultured rat astrocytes: induction by mitogens and stellation agents. J. Neurosci. Res. 23:247–256.
   PubMedGoogle Scholar
• Beutler, B., N. Krochin, I. W. Milsark, C. Luedke, and A. Cerami. 1986. Control of cachectin (tumor necrosis factor) synthesis: mechanisms of endotoxin resistance. Science 232:977–980.
   PubMed Web of Science ®Google Scholar
• Boraschi, D., S. Censini, Μ. Bartalini, and A. Tagliabue. 1985. Regulation of arachidonic acid metabolism in macrophages by immune and nonimmune interferons. J. Immunol. 135:502–505.
   PubMed Web of Science ®Google Scholar
• Bowyer, D. E., and Μ. J. Mitchinson. 1989. The role of macrophages in atherosclerosis, p. 439–458. In Μ. Zembala and G. L. Asherson (ed.), Human monocytes. Academic Press, San Diego, Calif.
   Google Scholar
• Celada, A., and R. D. Schreiber. 1986. Role of protein kinase C and intracellular calcium mobilization in the induction of macrophage tumoricidal activity by interferon-y. J. Immunol. 137:2373–2379.
   PubMed Web of Science ®Google Scholar
• Choubey, D., J. Snoddy, V. Chaturvedi, E. Toniato, G. Opdenakker, A. Thakur, H. Samanta, D. A. Engel, and P. Lengyel. 1989. Interferons as gene activators: indications for repeated gene duplication during the evolution of a cluster of interferon- activatable genes on murine chromosome 1. J. Biol. Chem. 264:17182–17189.
   PubMed Web of Science ®Google Scholar
• Christy, B. A., L. F. Lau, and D. Nathans. 1988. A gene activated in mouse 3T3 cells by serum growth factors encodes a protein with "zinc finger" sequences. Proc. Natl. Acad. Sci. USA 85:7857–7861.
   PubMed Web of Science ®Google Scholar
• Christy, B. A., and D. Nathans. 1989. DNA binding site of the growth factor-inducible protein zif268. Proc. Natl. Acad. Sci. USA 86:8737–8741.
   PubMed Web of Science ®Google Scholar
• Colonno, R. J., and R. H. L. Pang. 1982. Induction of unique mRNAs by human interferons. J. Biol. Chem. 257:9234–9237.
   PubMedGoogle Scholar
• Dale, T. C., A. Μ. A. Imam, I. Μ. Kerr, and G. R. Stark. 1989. Rapid activation by interferon-γ of a latent DNA-binding protein present in the cytoplasm of untreated cells. Proc. Natl. Acad. Sci. USA 86:1203–1207.
   PubMed Web of Science ®Google Scholar
• Devereux, J., P. Haeberli, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387–395.
   PubMed Web of Science ®Google Scholar
• Doe, W. F., and P. Μ. Henson. 1978. Macrophage stimulation by bacterial lipopolysaccharides. J. Exp. Med. 148:544–556.
   PubMedGoogle Scholar
• Dudley, J. P. 1987. Discrete high molecular weight RNA transcribed from the long interspersed repetitive element L1Md. Nucleic Acids Res. 15:2581–2592.
   PubMedGoogle Scholar
• Engel, D. A., J. Snoddy, E. Toniato, and P. Lengyel. 1988. Interferons as gene activators: close linkage of two interferon- activatable murine genes. Virology 166:24–29.
   PubMedGoogle Scholar
• Faltynek, C. R., G. L. Princier, G. L. Gusella, L. Varesio, and D. Radzioch. 1989. A functional protein kinase C is required for induction of 2-5A synthetase by recombinant interferon-αA in Daudi cells. J. Biol. Chem. 264:14305–14311.
   PubMedGoogle Scholar
• Fan, X., G. R. Stark, and B. R. Bloom. 1989. Molecular cloning of a gene selectively induced by gamma interferon from human macrophage cell line U937. Mol. Cell. Biol. 9:1922–1928.
   PubMed Web of Science ®Google Scholar
• Fanning, T. G. 1983. Size and structure of the highly repetitive BAM Hl element in mice. Nucleic Acids Res. 11:5073–5091.
   PubMedGoogle Scholar
• Farber, J. Μ. 1990. A macrophage mRNA selectively induced by γ-interferon encodes a member of the platelet factor 4 family of cytokines. Proc. Natl. Acad. Sci. USA 87:5238–5242.
   PubMed Web of Science ®Google Scholar
• Friedman, R. L., S. P. Manly, Μ. McMahon, I. Μ. Kerr, and G. R. Stark. 1984. Transcriptional and posttranscriptional regulation of interferon-induced gene expression in human cells. Cell 38:745–755.
   PubMed Web of Science ®Google Scholar
• Friedman, R. L., and G. R. Stark. 1985. γ-Interferon-induced transcription of HLA and metallothionein genes containing homologous upstream sequences. Nature (London) 314:637–639.
   PubMed Web of Science ®Google Scholar
• Gendelman, H. E., and Μ. S. Meltzer. 1989. HIV-infected monocytes in the pathogenesis of AIDS, p. 469–482. In Μ. Zembala and G. L. Asherson (ed.), Human monocytes. Academic Press, San Diego, Calif.
   Google Scholar
• Goldberg, D. A. 1980. Isolation and partial characterization of the Drosophila alcohol dehydrogenase gene. Proc. Natl. Acad. Sci. USA 77:5794–5798.
   PubMedGoogle Scholar
• Grabstein, K. H., D. L. Urdal, R. J. Tushinski, D. Y. Mochizuki, V. L. Price, Μ. A. Cantrell, S. Gillis, and P. J. Conlon. 1986. Induction of macrophage tumoricidal activity by granulocytemacrophage colony-stimulating factor. Science 232:506–508.
   PubMed Web of Science ®Google Scholar
• Gupta, Μ. P., Μ. Gupta, R. Zak, and V. P. Sukhatme. 1991. Egr-1, a serum-inducible zinc finger protein, regulates transcription of the rat cardiac α-myosin heavy chain gene. J. Biol. Chem. 266:12813–12816.
   PubMed Web of Science ®Google Scholar
• Hamilton, T. A., and D. O. Adams. 1987. Molecular mechanisms of signal transduction in macrophages. Immunol. Today 8:151–158.
   PubMedGoogle Scholar
• Hamilton, T. A., D. L. Becton, S. D. Somers, P. W. Gray, and D. O. Adams. 1985. Interferon-γ modulates protein kinase C activity in murine peritoneal macrophages. J. Biol. Chem. 260:1378–1381.
   PubMed Web of Science ®Google Scholar
• Hamilton, T. A., N. Bredon, Y. Ohmori, and C. S. Tannenbaum. 1989. IFN-γ and IFN-β independently stimulate the expression of lipopolysaccharide-inducible genes in murine peritoneal macrophages. J. Immunol. 142:2325–2331.
   PubMedGoogle Scholar
• Hamilton, T. A., S. D. Somers, D. L. Becton, A. Celada, R. D. Schreiber, and D. O. Adams. 1986. Analysis of deficiencies in IFN-γ-mediated priming for tumor cytotoxicity in peritoneal macrophages from A/J mice. J. Immunol. 137:3367–3371.
   PubMedGoogle Scholar
• Harada, H., T. Fujita, Μ. Miyamoto, Y. Kimura, Μ. Maruyama, A. Furia, T. Miyata, and T. Taniguchi. 1989. Structurally similar but functionally distinct factors, IRF-1 and IRF-2 bind to the same regulatory elements of IFN and IFN-inducible genes. Cell 58:729–739.
   PubMed Web of Science ®Google Scholar
• Hsu, J.-C., T. Laz, K. L. Mohn, and R. Taub. 1991. Identification of LRF-1, a leuine-zipper protein that is rapidly and highly induced in regenerating liver. Proc. Natl. Acad. Sci. USA 88:3511–3515.
   PubMedGoogle Scholar
• Kessler, D. S., S. A. Veals, X.-Y. Fu, and D. E. Levy. 1990. Interferon-α regulates nuclear translocation and DNA-binding affinity of ISGF3, a multimeric transcriptional activator. Genes Dev. 4:1753–1765.
   PubMed Web of Science ®Google Scholar
• Klein, J. B., T. Μ. Schepers, W. L. Dean, G. Sonnenfeld, and K. R. McLeish. 1990. Role of intracellular calcium concentration and protein kinase C activation in IFN-gamma stimulation of U937 cells. J. Immunol. 144:4305–4311.
   PubMedGoogle Scholar
• Kole, L. B., S. R. Haynes, and W. R. Jelinek. 1983. Discrete and heterogeneous high molecular weight RNAs complementary to a long dispersed repeat family (a possible transposon) of human DNA. J. Mol. Biol. 165:257–286.
   PubMed Web of Science ®Google Scholar
• Kujubu, D. A., B. S. Fletcher, B. C. Varnum, R. W. Lim, and H. R. Herschman. 1991. TS10, a phorbol ester tumor promoterinducible mRNA from Swiss 3T3 cells, encodes a novel prostaglandin synthase/cyclooxygenase homologue. J. Biol. Chem. 266:12866–12872.
   PubMed Web of Science ®Google Scholar
• Kusari, J., R. K. Tiwari, R. Kumar, and G. C. Sen. 1987. Expression of interferon-inducible genes in RD-114 cells. J. Virol. 61:1524–1531.
   PubMedGoogle Scholar
• Larner, A. C., A. Chaudhuri, and J. E. Darnell. 1986. Transcriptional induction by interferon. J. Biol. Chem. 261:453–459.
   PubMed Web of Science ®Google Scholar
• Lau, L. F., and D. Nathans. 1985. Identification of a set of genes expressed during the G0/G1 transition of cultured mouse cells. EMBO J. 4:3145–3151.
   PubMed Web of Science ®Google Scholar
• Lau, L. F., and D. Nathans. 1987. Expression of a set of growth-related immediate early genes in BALB/c 3T3 cells: coordinate regulation with c-fos or c-myc. Proc. Natl. Acad. Sci. USA 84:1182–1186.
   PubMed Web of Science ®Google Scholar
• Levy, D., and J. E. Darnell, Jr. 1990. Interferon-dependent transcriptional activation: signal transduction without second messenger involvement? New Biol. 2:923–928.
   PubMedGoogle Scholar
• Levy, D., D. Kessler, R. Pina, N. Reich, and J. Darnell, Jr. 1987. Interferon stimulated genes: promoters contain shared response elements that bind interferon-induced nuclear proteins. Genes Dev. 2:383–393.
   Google Scholar
• Lew, D. J., T. Decker, and J. E. Darnell, Jr. 1989. Alpha interferon and gamma interferon stimulate transcription of a single gene through different signal transduction pathways. Mol. Cell. Biol. 9:5404–5411.
   PubMed Web of Science ®Google Scholar
• Lim, R. W., B. C. Varnum, and H. R. Herschman. 1987. Cloning of tetradecanoyl phorbol ester-induced ‘primary response’ sequences and their expression in density-arrested Swiss 3T3 cells and a TPA nonproliferative variant. Oncogene 1:263–270.
   PubMed Web of Science ®Google Scholar
• Lin, A. H., Μ. J. Bienkowski, and R. R. Gorman. 1989. Regulation of prostaglandin H synthase mRNA levels and prostaglandin biosynthesis by platelet-derived growth factor. J. Biol. Chem. 264:17379–17383.
   PubMedGoogle Scholar
• Lu, C.-C., and E. K. Wakaland. Unpublished data. GenBank accession number M60562.
   Google Scholar
• Luster, A. D., J. C. Unkeless, and J. V. Ravetch. 1985. γ-Interferon transcriptionally regulates an early-response gene containing homology to platelet proteins. Nature (London) 315:672–676.
   PubMed Web of Science ®Google Scholar
• MacKay, R. J., and S. W. Russell. 1986. Protein changes associated with stages of activation of mouse macrophages for tumor cell killing. J. Immunol. 137:1392–1398.
   PubMedGoogle Scholar
• Marcucci, F., B. Klein, H. Kirchner, and R. Zawatzky. 1982. Production of high titers of interferon-gamma by prestimulated murine spleen cells. Eur. J. Immunol. 12:787–790.
   PubMedGoogle Scholar
• Milbrandt, J. 1987. A nerve growth factor-induced gene encodes a possible transcriptional regulatory factor. Science 238:797–799.
   PubMed Web of Science ®Google Scholar
• Miyamoto, Μ., T. Fujita, Y. Kimura, Μ. Maruyama, H. Harada, Y. Sudo, T. Miyata, and T. Taniguchi. 1988. Regulated expression of a gene encoding a nuclear factor, IRF-1, that specifically binds to IFN-β gene regulatory elements. Cell 54:903–913.
   PubMed Web of Science ®Google Scholar
• Nakamura, Μ., T. Manser, G. D. N. Pearson, Μ. J. Daley, and Μ. L. Gefter. 1984. Effect of IFN-γ on the immune response in vivo and on gene expression in vitro. Nature (London) 307:381–382.
   PubMed Web of Science ®Google Scholar
• Nathan, C. F., H. W. Murray, Μ. E. Wiebe, and B. Y. Rubin. 1983. Identification of IFN-γ as the lymphokine that activates human macrophage oxidative metabolism and antimicrobial activity. J. Exp. Med. 158:670–689.
   PubMed Web of Science ®Google Scholar
• Neuhaus, H., Μ. E. Hemler, Y. Takada, and I. L. Weissman. Unpublished data. EMBL accession number X53176.
   Google Scholar
• Nichols, F. C., and S. W. Garrison. 1987. Interferon-γ potentiation of lipopolysaccharide-induced eicosanoid release from human monocytes. J. Interferon Res. 7:121–129.
   PubMedGoogle Scholar
• Oka, T., B. W. Merrills, E. Huang, T. Okada, Y. Tanaka, P. Gertson, and K. Itakura. Unpublished data. GenBank accession number M62324.
   Google Scholar
• Opdenakker, G., J. Snoddy, D. Choubey, E. Toniato, D. D. Pravtcheva, Μ. F. Seldin, F. H. Ruddle, and P. Lengyel. 1989. Interferons as gene activators: a cluster of six interferon- activatable genes is linked to erythroid α-spectrin locus on murine chromosome 1. Virology 171:568–578.
   PubMedGoogle Scholar
• Parnes, J. R., B. Velan, A. Felsenfeld, L. Ramanathan, U. Ferrini, E. Appella, and J. G. Seidman. 1981. Mouse β2- microglobulin cDNA clones: a screening procedure for cDNA clones corresponding to rare mRNAs. Proc. Natl. Acad. Sci. USA 78:2253–2257.
   PubMed Web of Science ®Google Scholar
• Peden, K. W. C., P. Mounts, and G. S. Hayward. 1982. Homology between mammalian cell DNA sequences and human herpes virus genomes detected by a hybridization procedure with high complexity probe. Cell 31:71–80.
   PubMed Web of Science ®Google Scholar
• Philip, R., and L. B. Epstein. 1986. Tumor necrosis factor as immunomodulator and mediator of monocyte cytotoxicity induced by itself, γ-interferon and interleukin-1. Nature (London) 323:86–89.
   PubMed Web of Science ®Google Scholar
• Prpic, V., S. F. Yu, F. Figueiredo, P. W. Hollenbach, G. Gawdi, B. Herman, R. J. Uhing, and D. O. Adams. 1989. Role of Na+/H+ exchange by interferon-gamma in enhanced expression of JE and I-Aβ genes. Science 244:469–471.
   PubMedGoogle Scholar
• Raschke, W. C., S. Baird, P. Ralph, and I. Nakoinz. 1978. Functional macrophage cell lines transformed by Abelson leukemia virus. Cell 15:261–267.
   PubMed Web of Science ®Google Scholar
• Reich, N. C., and L. Μ. Pfeffer. 1990. Evidence for involvement of protein kinase C in the cellular response to interferon a. Proc. Natl. Acad. Sci. USA 87:8761–8765.
   PubMed Web of Science ®Google Scholar
• Revel, Μ., and J. Chebath. 1986. Interferon-activated genes. Trends Biochem. Sci. 11:166–170.
   Web of Science ®Google Scholar
• Rosa, F., D. Hatat, A. Abadie, D. Wallach, Μ. Revel, and Μ. Fellous. 1983. Differential regulation of HLA-DR mRNAs and cell surface antigens by interferon. EMBO J. 2:1585–1589.
   PubMedGoogle Scholar
• Rubin, B. Y., and S. L. Gupta. 1980. Differential efficacies of human type I and type II interferons as antiviral and antiproliferative agents. Proc. Natl. Acad. Sci. USA 77:5928–5932.
   PubMedGoogle Scholar
• Sanders, K. Μ., and B. H. Littman. 1986. Lymphokine stimulation of human macrophage C2 production is partially due to interferon-y. J. Immunol. 137:876–879.
   PubMedGoogle Scholar
• Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
   PubMed Web of Science ®Google Scholar
• Schneck, J., B. Rager-Zisman, O. Μ. Rosen, and B. R. Bloom. 1982. Genetic analysis of the role of cAMP in mediating effects of interferon. Proc. Natl. Acad. Sci. USA 79:1879–1833.
   PubMedGoogle Scholar
• Schultz, R. Μ., and W. J. Kleinschmidt. 1983. Functional identity between murine γ interferon and macrophage activating factor. Nature (London) 305:239–240.
   PubMed Web of Science ®Google Scholar
• Schumann, R. R., S. R. Leong, G. W. Flaggs, P. W. Gray, S. D. Wright, J. C. Mathison, P. S. Tobias, and R. J. Ulevitch. 1990. Structure and function of lipopolysaccharide binding protein. Science 249:1429–1431.
   PubMed Web of Science ®Google Scholar
• Searle, P. F., B. L. Davison, G. W. Stuart, T. Μ. Wilkie, G. Norstedt, and R. D. Palmiter. 1984. Regulation, linkage, and sequence of mouse metallothionein I and II genes. Mol. Cell. Biol. 4:1221–1230.
   PubMed Web of Science ®Google Scholar
• Sen, R., and D. Baltimore. 1986. Inducibility of κ immunoglobulin enhancer-binding protein NF-κΒ by a posttranslational mechanism. Cell 47:921–928.
   PubMed Web of Science ®Google Scholar
• Skowronski, J., and Μ. F. Singer. 1985. Expression of a cytoplasmic LINE-1 transcript is regulated in a human teratocarcinoma cell line. Proc. Natl. Acad. Sci. USA 82:6050–6054.
   PubMedGoogle Scholar
• Stoeckle, Μ. Y., and K. A. Barker. 1990. Two burgeoning families of platelet factor 4-related proteins: mediators of the inflammatory response. New Biol. 2:313–323.
   PubMedGoogle Scholar
• Sukhatme, V. P., X. Cao, L. C. Chang, C.-H. Tsai-Morris, D. Stamenkovich, P. C. P. Ferreira, D. R. Cohen, S. A. Edwards, T. B. Shows, T. Curran, Μ. Μ. LeBeau, and E. D. Adamson. A zinc finger-encoding gene coregulated with c-fos during growth and differentiation, and after cellular depolarization. Cell 53:3743.
   Google Scholar
• Sukhatme, V. P., S. Kartha, F. G. Toback, R. Taub, R. G. Hoover, and C.-H. Tsai-Morris. 1987. A novel early growth response gene rapidly induced by fibroblast, epithelial cell and lymphocyte mitogens. Oncogene Res. 1:343–355.
   PubMedGoogle Scholar
• Tannenbaum, C. S., T. J. Koerner, Μ. Μ. Jansen, and T. A. Hamilton. 1988. Characterization of lipopolysaccharide-induced macrophage gene expression. J. Immunol. 140:3640–3645.
   PubMedGoogle Scholar
• Thorens, B., J. J. Mermod, and P. Vassalli. 1987. Phagocytosis and inflammatory stimuli induce GM-CSF mRNA in macrophages through posttranscriptional regulation. Cell 48:671–679.
   PubMed Web of Science ®Google Scholar
• Ulker, N., and C. E. Samuel. 1985. Mechanism of interferon action: inhibition of vesicular stomatitis virus replication in human amnion U cells by cloned human γ-interferon. J. Biol. Chem. 260:4324–4330.
   PubMedGoogle Scholar
• Uze, G., G. Lutfalla, and I. Gresser. 1990. Genetic transfer of a functional human interferon α receptor into mouse cells: cloning and expression of its cDNA. Cell 60:225–234.
   PubMed Web of Science ®Google Scholar
• Vanguri, P., and J. Μ. Farber. 1990. Identification of CRG-2: an interferon-inducible mRNA predicted to encode a murine monokine. J. Biol. Chem. 265:15049–15057.
   PubMed Web of Science ®Google Scholar
• Wahl, S. Μ., L. Μ. Wahl, J. B. McCarthy, L. Chedid, and S. E. Mergenhagen. 1979. Macrophage activation by mycobacterial water soluble compounds and synthetic muramyl dipeptide. J. Immunol. 122:2226–2231.
   PubMedGoogle Scholar
• Wallach, D., Μ. Fellous, and Μ. Revel. 1982. Preferential effect of y interferon on the synthesis of HLA antigens and their mRNAs in human cells. Nature (London) 299:833–836.
   PubMed Web of Science ®Google Scholar
• Weiel, J. E., T. A. Hamilton, and D. O. Adams. 1986. LPS induces altered phosphate labeling of proteins in murine peritoneal macrophages. J. Immunol. 136:3012–3018.
   PubMed Web of Science ®Google Scholar
• Weil, J., C. J. Epstein, L. B. Epstein, J. J. Sedmak, J. L. Sabran, and S. E. Grossberg. 1983. A unique set of polypeptides is induced by γ interferon in addition to those induced in common with a and β interferons. Nature (London) 301:437–439.
   PubMed Web of Science ®Google Scholar
• Weinshank, R. L., A. D. Luster, and J. V. Ravetch. 1988. Function and regulation of a murine macrophage-specific IgG Fc receptor, FcγR-α. J. Exp. Med. 167:1909–1925.
   PubMed Web of Science ®Google Scholar
• Wright, S. D., R. A. Ramos, P. S. Tobias, R. J. Ulevitch, and J. C. Mathison. 1990. CD14, a receptor for complexes of lipopolysaccharide (LPS) and LPS binding protein. Science 249:1431–1433.
   PubMed Web of Science ®Google Scholar
• Wright, T. Μ., and J. Μ. Farber. 1991. 5′ regulatory region of a novel cytokine gene mediates selective activation by interferon y. J. Exp. Med. 173:417–422.
   PubMed Web of Science ®Google Scholar
• Yan, C., P. B. Sehgal, and I. Tamm. 1989. Signal transduction pathways in the induction of 2′,5′-oligoadenylate synthetase gene expression by interferon α/β. Proc. Natl. Acad. Sci. USA 86:2243–2247.
   PubMedGoogle Scholar
• Yap, W. H., T. S. Teo, and Y. H. Tan. 1986. An early event in the interferon-induced transmembrane signaling process. Science 234:355–358.
   PubMedGoogle Scholar
• Zembala, Μ., and G. L. Asherson (ed.). 1989. Human monocytes. Academic Press, San Diego, Calif.
   Google Scholar