SRN1, a Yeast Gene Involved in RNA Processing, Is Identical to HEX2/REG1, a Negative Regulator in Glucose Repression

References

• Atkinson, Ν. S., R. W. Dunst, and A. K. Hopper. 1985. Characterization of an essential Saccharomyces cerevisiae gene related to RNA processing: cloning of RNA1 and generation of a new allele with a novel phenotype. Mol. Cell. Biol. 5:907–915.
   PubMedGoogle Scholar
• Birnboim, H. C., and J. Doly. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513–1523.
   PubMed Web of Science ®Google Scholar
• Carlson, M. 1987. Regulation of sugar utilization in Saccharomyces species. J. Bacteriol. 169:4873–4877.
   PubMed Web of Science ®Google Scholar
• Carlson, Μ., Β. C. Osmond, and D. Botstein. 1981. Mutants of yeast defective in sucrose utilization. Genetics 98:25–40.
   PubMed Web of Science ®Google Scholar
• Culbertson, M. R., and M. Winey. 1989. Split tRNA genes and their products: a paradigm for the study of cell function and evolution. Yeast 5:405–427.
   PubMed Web of Science ®Google Scholar
• Entian, K.-D., and F. K. Zimmermann. 1980. Glycolytic enzymes and intermediates in carbon catabolite repression mutants of Saccharomyces cerevisiae. Mol. Gen. Genet. 177:345–350.
   PubMedGoogle Scholar
• Entian, K.-D., and F. K. Zimmermann. 1982. New genes involved in carbon catabolite repression and derepression in the yeast Saccharomyces cerevisiae. J. Bacteriol. 151:1123–1128.
   PubMed Web of Science ®Google Scholar
• Gillman, E. C., L. B. Slusher, N. C. Martin, and A. K. Hopper. 1991. MOD5 translation initiation sites determine N6-isopente-nyladenosine modification of mitochondrial and cytoplasmic tRNA. Mol. Cell. Biol. 11:2382–2390.
   PubMedGoogle Scholar
• Guyer, M. S. 1983. Uses of the transposon γδ in the analysis of cloned genes. Methods Enzymol. 101:362–369.
   PubMedGoogle Scholar
• Hartwell, L. H. 1967. Macromolecule synthesis in temperature-sensitive mutants of yeast. J. Bacteriol. 93:1662–1670.
   PubMed Web of Science ®Google Scholar
• Hopper, A. K. 1990. Genetic methods for study of trans-acting genes involved in processing of precursors to yeast cytoplasmic transfer RNAs. Methods Enzymol. 181:400–421.
   PubMedGoogle Scholar
• Hopper, A. K., F. Banks, and V. Evangelidis. 1978. A yeast mutant which accumulates precursor tRNAs. Cell 14:211–219.
   PubMed Web of Science ®Google Scholar
• Hopper, Α. Κ., Η. Μ. Traglia, and R. W. Dunst. 1990. The yeast RNA1 gene product necessary for RNA processing is located in the cytosol and apparently excluded from the nucleus. J. Cell Biol. 111:309–321.
   PubMed Web of Science ®Google Scholar
• Hurt, D. J., S. S. Wang, Y.-H. Lin, and A. K. Hopper. 1987. Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing. Mol. Cell. Biol. 7:1208–1216.
   PubMed Web of Science ®Google Scholar
• Hutchison, H. T., L. H. Hartwell, and C. S. McLaughlin. 1969. Temperature-sensitive yeast mutant defective in ribonucleic acid production. J. Bacteriol. 99:807–814.
   PubMed Web of Science ®Google Scholar
• Ito, H., Y. Fukuda, K. Murata, and A. Kimura. 1983. Transformation of intact yeast cells treated with alkaline cations. J. Bacteriol. 153:163–168.
   PubMed Web of Science ®Google Scholar
• Johnston, M., and M. Carlson. Regulation of carbon and phosphate utilization. In E. W. Jones, J. R. Pringle, and J. R. Broach (ed.), The molecular biology of the yeast Saccharomyces, in press. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Knapp, G., J. S. Beckmann, P. F. Johnson, S. A. Fuhrman, and J. Abelson. 1978. Transcription and processing of intervening sequences in yeast tRNA genes. Cell 14:221–236.
   PubMed Web of Science ®Google Scholar
• Kuo, C.-L., and J. L. Campbell. 1983. Cloning of Saccharomyces cerevisiae DNA replication genes: isolation of the CDC8 gene and two genes that compensate for the cdc8-1 mutation. Mol. Cell. Biol. 3:1730–1737.
   PubMedGoogle Scholar
• Long, R. M., L. M. Mylin, and J. E. Hopper. 1991. GAL11 (SPT13), a transcriptional regulator of diverse yeast genes, affects the phosphorylation state of GAL4, a highly specific transcriptional activator. Mol. Cell. Biol. 11:2311–2314.
   PubMedGoogle Scholar
• Lorincz, A. 1985. Quick preparation of plasmid DNA from yeast. BRL Focus 6:11.
   Google Scholar
• Maddock, J., R. Lunz, and J. Woolford, Jr. Personal communication.
   Google Scholar
• Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Matsumoto, K., T. Yoshimatsu, and Y. Oshima. 1983. Recessive mutations conferring resistance to carbon catabolite repression of galactokinase synthesis in Saccharomyces cerevisiae. J. Bacteriol. 153:1405–1414.
   PubMed Web of Science ®Google Scholar
• Mortimer, R., and D. Hawthorne. 1969. Yeast genetics, p. 385–460. In A. H. Rose and J. S. Harrison (ed.), The yeasts, vol. 1. Academic Press, Inc., New York.
   Google Scholar
• Niederacher, D., and K.-D. Entian. 1987. Isolation and characterization of the regulatory HEX2 gene necessary for glucose repression in yeast. Mol. Gen. Genet. 206:505–509.
   PubMedGoogle Scholar
• Niederacher, D., and K.-D. Entian. 1991. Characterization of Hex2 protein, a negative regulatory element necessary for glucose repression in yeast. Eur. J. Biochem. 200:311–319.
   PubMedGoogle Scholar
• Nolan, S. L. 1989. Analysis of a suppressor of the yeast mutation rna1-1. Ph.D. thesis. Pennsylvania State University, Hershey.
   Google Scholar
• Orr-Weaver, T. L., J. W. Szostak, and R. J. Rothstein. 1981. Yeast transformation: a model system for the study of recombination. Proc. Natl. Acad. Sci. USA 78:6354–6358.
   PubMed Web of Science ®Google Scholar
• Orr-Weaver, T. L., J. W. Szostak, and R. J. Rothstein. 1983. Genetic applications of yeast transformation with linear and gapped plasmids. Methods Enzymol. 101:228–245.
   PubMed Web of Science ®Google Scholar
• Pearson, N. J., P. C. Thorburn, and J. E. Haber. 1982. A suppressor of temperature-sensitive rna mutations that affect mRNA metabolism in Saccharomyces cerevisiae. Mol. Cell. Biol. 2:571–577.
   PubMedGoogle Scholar
• Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444–2448.
   PubMed Web of Science ®Google Scholar
• Peterson, G. L. 1977. A simplification of the protein assay method of Lowry et al. which is more generally applicable. Anal. Biochem. 83:346–356.
   PubMed Web of Science ®Google Scholar
• Piper, P. W., and J. L. Aamand. 1989. Yeast mutation thought to arrest mRNA transport markedly increases the length of the 3′ poly(A) on polyadenylated RNA. J. Mol. Biol. 208:697–700.
   PubMedGoogle Scholar
• Rosbash, M., P. Harris, J. L. Woolford, Jr., and J. L. Teem. 1981. The effect of temperature-sensitive RNA mutants on the transcription products from cloned ribosomal protein genes of yeast. Cell 24:679–686.
   PubMedGoogle Scholar
• Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
   PubMed Web of Science ®Google Scholar
• Shiokawa, K., and A. O. Pogo. 1974. The role of cytoplasmic membranes in controlling the transport of nuclear messenger RNA and initiation of protein synthesis. Proc. Natl. Acad. Sci. USA 71:2658–2662.
   PubMedGoogle Scholar
• Slusher, L. B., E. C. Gillman, N. C. Martin, and A. K. Hopper. 1991. mRNA leader length and initiation codon context determine alternative AUG selection for the yeast gene MOD5. Proc. Natl. Acad. Sci. USA 88:9789–9793.
   PubMedGoogle Scholar
• St. John, T. P., and R. W. Davis. 1981. The organization and transcription of the galactose gene cluster of Saccharomyces. J. Mol. Biol. 152:285–315.
   PubMedGoogle Scholar
• Towbin, H., T. Staehelin, and J. Gordon. 1979. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. USA 76:4350–4354.
   PubMed Web of Science ®Google Scholar
• Traglia, H. M., N. S. Atkinson, and A. K. Hopper. 1989. Structural and functional analyses of Saccharomyces cerevisiae wild-type and mutant RNA1 genes. Mol. Cell. Biol. 9:2989–2999.
   PubMedGoogle Scholar
• Woolford, J. L. 1989. Nuclear pre-mRNA splicing in yeast. Yeast 5:439–457.
   PubMed Web of Science ®Google Scholar
• Zimmermann, F. K., and I. Scheel. 1977. Mutants of Saccharomyces cerevisiae resistant to carbon catabolite repression. Mol. Gen. Genet. 154:75–82.
   PubMedGoogle Scholar