4
Views
4
CrossRef citations to date
0
Altmetric
DNA Dynamics and Chromosome Structure

A Common Element Involved in Transcriptional Regulation of Two DNA Alkylation Repair Genes (MAG and MGT1) of Saccharomyces cerevisiae

, , &
Pages 7213-7221 | Received 28 May 1993, Accepted 26 Aug 1993, Published online: 31 Mar 2023

References

  • Barker, D. G., J. H. M. White, and L. H. Johnston. 1985. The nucleotide sequence of the DNA ligase gene (CDC9 from Saccharomyces cerevisiae a gene which is cell-cycle regulated and induced in response to DNA damage. Nucleic Acids Res. 13:8323–8337.
  • Basile, G., M. Aker, and R. K. Mortimer. 1992. Nucleotide sequence and transcriptional regulation of the yeast recombina-tional repair gene RAD51. Mol. Cell. Biol. 12:3235–3246.
  • Basile, G., and R. K. Mortimer. Personal communication.
  • Chan, C. L., Z. Wu, A. Eastman, and E. Bresnick. 1990. Induction and purification of 06-methylguanine-DNA-methyl-transferase from rat liver. Carcinogenesis 11:1217–1221.
  • Chan, C. L., Z. Wu, A. Eastman, and E. Bresnick. 1992. Irradiation-induced expression of 06-methylguanine-DNA me-thyltransferase in mammalian cells. Cancer Res. 52:1804–1809.
  • Chen, J., B. Derfler, A. Maskati, and L. Samson. 1989. Cloning a eukaryotic DNA glycosylase repair gene by the suppression of a DNA repair defect in Escherichia coli. Proc. Natl. Acad. Sci. USA 86:7961–7965.
  • Chen, J., B. Derfler, and L. Samson. 1989. Saccharomyces cerevisiae 3-methyladenine DNA glycosylase has homology to the AlkA glycosylase of E. coli and is induced in response to DNA alkylation damage. EMBO J. 9:4569–4575.
  • Chen, J., and L. Samson. 1991. Induction of S. cerevisiae MAG 3-methyladenine DNA glycosylase transcript levels in response to DNA damage. Nucleic Acids Res. 19:6427–6432.
  • Cole, G. M., and R. K. Mortimer. 1989. Failure to induce a DNA repair gene, RAD54 in Saccharomyces cerevisiae does not affect repair of recombination phenotype. Mol. Cell. Biol. 9:3314–3326.
  • Couto, L. B., and E. C. Friedberg. 1989. Nucleotide sequencing of wild-type RAD4 gene of Saccharomyces cerevisiae and characteristic of mutant rad4 alleles. J. Bacteriol. 171:1862–1869.
  • Elledge, S. J., and R. W. Davis. 1987. Identification and isolation of the gene encoding the small subunit of ribonucleotide reductase from Saccharomyces cerevisiae:: DNA damage-inducible gene required for mitotic viability. Mol. Cell. Biol. 7:2783–2793.
  • Elledge, S. J., and R. W. Davis. 1989. DNA damage induction of ribonucleotide reductase. Mol. Cell. Biol. 9:4932–4940.
  • Elledge, S. J., and R. W. Davis. 1989. Identification of the DNA damage responsive element of RNR2 and evidence that four distinct cellular factors bind it. Mol. Cell. Biol. 9:5373–5386.
  • Elledge, S. J., and R. W. Davis. 1990. Two genes differentially regulated in the cell cycle and by DNA-damaging agents encode alternative regulatory subunits of ribonucleotide reductase. Gene Dev. 4:740–751.
  • Fleer, R., C. M. Nicolet, G. A. Pure, and E. C. Friedberg. 1987. RAD4 gene of Saccharomyces cerevisiae: molecular cloning and partial characterization of a gene that is inactivated in Escherichia coli.. Mol. Cell. Biol. 7:1180–1192.
  • Fornace, J. A. J., J. I. Alamo, and M. C. Hollander. 1988. DNA damage-inducible transcripts in mammalian cells. Proc. Natl. Acad. Sci. USA 85:8800–8804.
  • Friedberg, E. C.. 1985. DNA repair. Freeman & Co., San Francisco.
  • Friedberg, E. C.%% 1988. Deoxyribonucleic acid repair in the yeast Saccharomyces cerevisiae. Microbiol. Rev. 52:70–102.
  • Frosina, G., and A. Abbondandolo. 1985. The current evidence for adaptive response to alkylating agents in the mammalian cells, with special reference to experiments with in vitro cultures. Mutat. Res. 154:85–100.
  • Gietz, R. D., and S. Prakash. 1988. Cloning and nucleotide sequence analysis of the Saccharomyces cerevisiae RAD4 gene required for excision repair of UV-damaged DNA. Gene 74: 535–541.
  • Guarente, L.%% 1983. Yeast promoters and lacZ fusions designed to study expression of cloned genes in yeast. Methods Enzymol. 101:181–191.
  • Hurd, H. K., C. W. Roberts, and J. W. Roberts. 1987. Identification of the gene for the yeast ribonucleotide reductase small subunit and its inducibility by methyl methanesulfonate. Mol. Cell. Biol. 7:3673–3677.
  • Hurd, H. K., and J. W. Roberts. 1989. Upstream regulatory sequences of the yeast RNR2 gene include a repression sequence and an activation site that binds the RAP1 protein. Mol. Cell. Biol. 9:5359–5372.
  • Ito, H., Y. Fukuda, K. Murata, and A. Kimura. 1983. Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153:163–168.
  • Jones, J. S., and L. Prakash. 1991. Transcript levels of the Saccharomyces cerevisiae DNA repair gene RAD18 increase in UV irradiated cells and during meiosis but not during the mitotic cell cycle. Nucleic Acids Res. 19:893–898.
  • Kovari, L., R. Sumrada, I. Kovari, and T. G. Cooper. 1990. Multiple positive and negative cis-acting elements mediate induced arginase (CAR1) gene expression in Saccharomyces cerevisiae. Mol. Cell. Biol. 10:5087–5097.
  • Lustig, A. J., S. Kurtz, and D. Shore. 1990. Involvement of the silencer and UAS binding protein RAP1 in regulation of telomer length. Science 250:549–553.
  • Madura, K., and S. Prakash. 1986. Nucleotide sequence, transcript mapping, and regulation of the RAD2 gene of Saccharomyces cerevisiae. J. Bacteriol. 166:914–923.
  • Madura, K., and S. Prakash. 1990. Transcript levels of the Saccharomyces cerevisiae DNA repair gene RAD23 increase in response to UV light and in meiosis but remain constant in the mitotic cell cycle. Nucleic Acids Res. 18:4737–4742.
  • Madura, K., S. Prakash, and L. Prakash. 1990. Expression of the Saccharomyces cerevisiae DNA repair gene RAD6 that encodes a ubiquitin conjugating enzyme, increases in response to DNA damage and in meiosis but remains constant during the mitotic cell cycle. Nucleic Acids Res. 18:771–778.
  • Mannhaupt, G., R. Stucka, S. Ehnle, I. Vetter, and H. Feldman. 1992. Molecular analysis of yeast chromosome II between CMD1 and LYS2 the excision repair gene RAD16 located in this region belongs to a novel group of double-finger proteins. Yeast 8:397–408.
  • Mathews, K. S.. 1992. DNA looping. Microbiol. Rev. 56:123–136.
  • McClanahan, T., and K. McEntee. 1984. Specific transcripts are elevated in Saccharomyces cerevisiae in response to DNA damage. Mol. Cell. Biol. 4:2356–2363.
  • Montesano, R., H. Bresil, G. Planche-Martel, G. Margison, and A. E. Pegg. 1983. Stability and capacity of dimethyl-nitro-samine-induced 06-methylguanine repair system in rat liver. Cancer Res. 43:5808–5814.
  • Myers, A. M., A. Tzagoloff, D. M. Kinney, and C. J. Lusty. 1986. Yeast shuttle and integrative vectors with multiple cloning sites suitable for construction of lacZ fusions. Gene 45:299–310.
  • Ogawa, T., Y. Xiong, A. Shinohara, and E. H. Egelman. 1993. Similarity of the yeast RAD51 filament to the bacterial RecA filament. Science 259:1896–1899.
  • Peterson, T. A., L. Prakash, S. Prakash, A. A. Osley, and S. I. Reed. 1985. Regulation of CDC9 the Saccharomyces cerevisiae gene that encodes DNA ligase. Mol. Cell. Biol. 5:226–235.
  • Reynolds, P., L. Prakash, D. Dumais, G. Perozzi, and S. Prakash. 1985. Nucleotide sequence of the RADIO gene of Saccharomyces cerevisiae. EMBO J. 4:3549–3552.
  • Robinson, G. W., C. M. Nicolet, D. Kalainov, and E. C. Friedberg. 1986. A yeast excision-repair gene is inducible by DNA damaging agents. Proc. Natl. Acad. Sci. USA 83:1842–1846.
  • Ruby, S. W., and J. W. Szostak. 1985. Specific Saccharomyces cerevisiae genes are expressed in response to DNA-damaging agents. Mol. Cell. Biol. 5:75–84.
  • Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
  • Sanger, E., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
  • Sebastian, J., B. Kraus, and G. B. Sancar. 1990. Expression of the yeast PHR1 gene is induced by DNA-damaging agents. Mol. Cell. Biol. 10:4630–4637.
  • Sebastian, J., and G. B. Sancar. 1991. A damage-responsive DNA binding protein regulates transcription of the yeast DNA repair gene PHR1. Proc. Natl. Acad. Sci. USA 88:11251–11255.
  • Sherman, F., G. R. Fink, and E. B. Ficks. 1983. Methods in yeast genetics: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
  • Siede, W., and E. C. Friedberg. 1992. Regulation of the yeast RAD2 gene: DNA damage-dependent induction correlates with protein binding to regulatory sequences and their deletion influences survival. Mol. Gen. Genet. 232:247–256.
  • Siede, W., G. W. Robinson, D. Kalainov, T. Malley, and E. C. Friedberg. 1989. Regulation of the RAD2 gene of Saccharomyces cerevisiae. Mol. Microbiol. 3:1697–1707.
  • Singh, K. K., and L. Samson. Unpublished results.
  • Stein, B., H. J. Rahmsdorf, A. Steffen, M. Litfin, and P. Herrlich. 1989. UV-induced DNA damage is an intermediate step in UV-induced expression of human immunodeficiency virus type 1, collagenase, c-fos and metallothionein. Mol. Cell. Biol. 9:5169–5181.
  • Story, R. M., D. K. Bishop, N. Kleckner, and T. A. Steitz. 1993. Structural relationship of bacterial RecA protein to recombination proteins from bacteriophage T4 and yeast. Science 259: 1892–1896.
  • Treger, J. M., K. A. Heichman, and K. McEntee. 1988. Expression of the yeast UB14 gene increases in response to DNA-damaging agents and in meiosis. Mol. Cell. Biol. 8:1132–1136.
  • Treger, J. M., and K. McEntee. 1990. Structure of the DNA damage-inducible gene DDR48 and evidence for its role in mutagenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 10:3174–3184.
  • Xiao, W., B. Derfler, J. Chen, and L. Samson. 1991. Primary sequence and biological functions of a Saccharomyces cerevisiae 06-methylguanine/04-methylthymine DNA repair methyl-transferase gene. EMBO J. 10:2179–2186.
  • Xiao, W., and L. Samson. 1992. The Saccharomyces cerevisiae MGT1 DNA repair methyltransferase gene: its promoter and entire coding sequence, regulation and in vivo biological functions. Nucleic Acids Res. 20:3599–3606.
  • Yagle, K., and K. McEntee. 1990. The DNA damage-inducible gene DIN1 of Saccharomyces cerevisiae encodes a regulatory subunit of ribonucleotide reductase and is identical to RNR3. Mol. Cell. Biol. 10:5553–5557.
  • Yang, E., and E. C. Friedberg. 1984. Molecular cloning and nucleotide sequence of Saccharomyces cerevisiae RAD1 gene. Mol. Cell. Biol. 4:2161–2169.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.