Pichia pastoris as a Host System for Transformations

LITERATURE CITED

• Anthony, C. 1982. The Biochemistry of methylotrophs. Academic Press, Inc., New York.
   Google Scholar
• Beach, D., and Nurse P.. 1981. High-frequency transformation of the fission yeast Schizosaccharomyces pombe. Nature (London) 290:140–142.
   PubMed Web of Science ®Google Scholar
• Beggs, J. D. 1978. Transformation of yeast by a replicating hybrid plasmid. Nature (London) 275:104–109.
   PubMed Web of Science ®Google Scholar
• Birnboim, H. C, and Doly J.. 1979. A rapid alkaline extraction procedure for screening recombinant DNA. Nucleic Acids Res. 7:1513–1523.
   PubMed Web of Science ®Google Scholar
• Bolivar, F. 1978. Construction and characterization of new cloning vehicles. III. Derivatives of plasmid pBR322 carrying unique Eco RI sites for selection of Eco RI generated recombinant DNA molecules. Gene 4:121–136.
   PubMed Web of Science ®Google Scholar
• Bolivar, F., Rodriguez R. L., Greene P. J., Betlach M. C., Heyneker H. L., Boyer H. W., Crosa J. H., and Falkow S.. 1977. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2:95–113.
   PubMed Web of Science ®Google Scholar
• Broach, J. R. 1981. Genes of Saccharomyces cerevisiae, p. 653–727. In Strathern J. N., Jones E. W., and Broach J. R. (ed.), The molecular biology of the yeast Saccharomyces: life cycle and inheritance. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Broach, J. R., and Hicks J. B.. 1980. Replication and recombination functions associated with the yeast plasmid 2 micron circle. Cell 21:501–508.
   PubMed Web of Science ®Google Scholar
• Broach, J. R., Li Y.-Y., Feldman J., Jayaram M., Abraham J., Nasmyth K. A., and Hicks J. B.. 1983. Localization and sequence analysis of yeast origins of DNA replication. Cold Spring Harbor Symp. Quant. Biol. 47:1165–1173.
   PubMedGoogle Scholar
• Broach, J. R., Strathern J. N., and Hicks J. B.. 1979. Transformation of yeast: development of a hybrid cloning vector and isolation of the CAN1 gene. Gene 8:121–133.
   PubMed Web of Science ®Google Scholar
• Cooney, C. L., and Levine D. W.. 1972. Microbial utilization of methanol. Adv. Appl. Microbiol. 15:337–365.
   PubMedGoogle Scholar
• Couderc, R., and Baratti J.. 1980. Oxidation of methanol by the yeast Pichia pastoris. Purification and properties of alcohol oxidase. Agric. Biol. Chem. 44:2279–2289.
   Web of Science ®Google Scholar
• Cryer, D. R., Eccleshall R., and Marmur J.. 1975. Isolation of yeast DNA. Methods Cell Biol. 12:39–44.
   PubMedGoogle Scholar
• Das, S., and Hollenberg C. P.. 1982. A high-frequency transformation system for the yeast Kluyveromvces lactis. Curr. Genet. 6:123–128.
   PubMed Web of Science ®Google Scholar
• Das, S., Kellermann E., and Hollenberg C. P.. 1984. Transformation of Kluyveromyces fragilis. J. Bacteriol. 158:1165–1167.
   PubMedGoogle Scholar
• Donahue, T. F., Farabaugh P. J., and Fink G. R.. 1982. The nucleotide sequence of the HIS4 region of yeast. Gene 18:47–59.
   PubMed Web of Science ®Google Scholar
• Ellis, S. B., Brust P. F., Koutz P. J., Waters A. F., Harpold M. M., and Gingeras T. R.. 1985. Isolation of alcohol oxidase and two other methanol regulatable genes from the yeast Pichia pastoris. Mol. Cell. Biol. 5:1111–1121.
   PubMed Web of Science ®Google Scholar
• Fukui, S., and Tanaka A.. 1979. Peroxisomes of alkane- and methanol-grown yeasts. Metabolic functions and practical applications. J. Appl. Biochem. 1:171–201.
   Google Scholar
• Girvitz, S. C, Bacchetti S., Rainbow A. J., and Graham F. L.. 1980. A rapid and efficient procedure for the purification of DNA from agarose gels. Anal. Biochem. 106:492–496.
   PubMedGoogle Scholar
• Hinnebusch, A. G., and Fink G. R.. 1983. Repeated DNA sequences upstream from HISl also occur at several other co-regulated genes in Saccharomyces cerevisiae. J. Cell. Biol. 258:5238–5247.
   Google Scholar
• Hinnen, A., Farabaugh P., Ilgen C., Fink G. R., and Friesen J.. 1979. Isolation of a yeast gene (his4) by transformation of yeast. ICN-UCLA Symp. Mol. Cell. Biol. 14:43–50.
   Google Scholar
• Hinnen, A., Hicks J. B., and Fink G. R.. 1978. Transformation of yeast. Proc. Natl. Acad. Sci. USA 75:1929–1933.
   PubMed Web of Science ®Google Scholar
• Ito, H., Murata K., and Kimura A.. 1983. Transformation of intact yeast cells treated with alkali cations or thiol compounds. Agric. Biol. Chem. 48:341–347.
   Google Scholar
• Jones, E. W., and Fink G. R.. 1982. Regulation of amino acid and nucleotide biosynthesis in yeast, p. 181–299. In Strathern J. N., Jones E. W., and Broach J. R. (ed.), The molecular biology of the yeast Saccharomyces: metabolism and gene expression. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Kearsey, S. 1984. Structural requirements for the function of a yeast chromosomal replicator. Cell 37:299–307.
   PubMed Web of Science ®Google Scholar
• Kingsman, A. J., Clarke L., Mortimer R. K., and Carbon J.. 1979. Replication in Saccharomyces cerevisiae of plasmid pBR313 carrying DNA from the yeast trpl region. Gene 7:141–152.
   PubMedGoogle Scholar
• Mandel, M., and Higa A.. 1970. Calcium dependent bacteriophage DNA infection. J. Mol. Biol. 53:159–162.
   PubMed Web of Science ®Google Scholar
• Maniatis, T., Fritsch E. F., and Sambrook J. (ed.). 1982. Molecular cloning, a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Martin, R. G., Berberich M. A., Ames B. N., Davis W. W., Goldberger R. F., and Yourno J. D.. 1971. Enzymes and intermediates of histidine biosynthesis in Salmonella typhimurium. Methods Enzymol 17B:1–44.
   Google Scholar
• Miller, J. H. (ed.). 1972. Experiments in molecular genetics, p. 433. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Montiel, J. F., Norbury C. J., Tuite M. F., Dobson M. J., Mills J. S., Kingsman A. J., and Kingsman S. M.. 1984. Characterization of human chromosomal DNA sequences which replicate autonomously in Saccharomyces cerevisiae. Nucleic Acids Res. 12:1049–1068.
   PubMed Web of Science ®Google Scholar
• Mortimer, R. K., and Schild D.. 1981. Genetic map of Saccharomyces cerevisiae, p. 641–652. In Strathern J. N., Jones E. W., and Broach J. R. (ed.), The molecular biology of the yeast Saccharomyces: life cycle and inheritance. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Rigby, P. W. J., Dieckmann M., Rhodes C., and Berg P.. 1977. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J. Mol. Biol. 113:737–751.
   Google Scholar
• Roa, M., and Blobel G.. 1983. Biosynthesis of peroxisomal enzymes in the methylotrophic yeast Hansenula polvmorpha. Proc. Natl. Acad. Sci. USA 80:6872–6876.
   PubMedGoogle Scholar
• Roggenkamp, R., Janowicz Z., Stanikowski B., and Hollenberg C. P.. 1984. Biosynthesis and regulation of the peroxisomal methanol oxidase from the methylotrophic yeast Hansenula polvmorpha. Mol. Gen. Genet. 194:489–493.
   PubMedGoogle Scholar
• Roth, G. E., Blanton H. M., Hager L. J., and Zakian V. A.. 1983. Isolation and characterization of sequences from mouse chromosomal DNA with ARS function in yeasts. Mol. Cell. Biol. 3:1898–1908.
   PubMedGoogle Scholar
• Rothstein, R. J., Orr-Weaver T. L., and Szostak J. W.. 1984. Double-strand breaks and genetic recombination, p. 191–199. In Esposito M. S. (ed.), Yeast molecular biology–recombinant DNA. Noyes Publications, Park Ridge, N.J.
   Google Scholar
• Sahm, H., and Wagner F.. 1973. Microbial assimilation of methanol: the ethanol- and methanol-oxidizing enzymes of the yeast Candida boidinii.. Eur. J. Biochem. 36:250–256.
   PubMedGoogle Scholar
• Sanger, F., Nicklen S., and Coulson A. R.. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
   PubMed Web of Science ®Google Scholar
• Sherman, F., Fink G. R., and Hicks J. B.. 1983. Methods in yeast genetics laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
   Google Scholar
• Smith, S. R. L. 1981. Some aspects of ICI single cell protein process, p. 342–348. In Dalton H. (ed.). Microbial growth in Ci compounds. Heyden, London.
   Google Scholar
• Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503–517.
   PubMed Web of Science ®Google Scholar
• Stinchcomb, D. T., Mann C., Selker E., and Davis R. W.. 1981. DNA sequences that allow the replication and segregation of yeast chromosomes. ICN-UCLA Symp. Mol. Cell. Biol. 22:473–485.
   Google Scholar
• Stinchcomb, D. T., Thomas M., Kelly J., Selker E., and Davis R. W.. 1980. Eukaryotic DNA segments capable of autonomous replication in yeast. Proc. Natl. Acad. Sci. USA 77:4559–4563.
   PubMedGoogle Scholar
• Storck, R., and Alexopoulos C. J.. 1970. Deoxyribonucleic acid of fungi. Bacteriol. Rev. 34:126–154.
   PubMedGoogle Scholar
• Struhl, K., and Davis R. W.. 1980. Production of a functional eukaryotic enzyme in Escherichia coli. Cloning and expression of the yeast structural gene for imidazole-glycerolphosphate dehydratase (his3). Proc. Natl. Acad. Sci. USA 74:5255–5259.
   Google Scholar
• Struhl, K., Stinchcomb D. T., Scherer S., and Davis R. W.. 1979. High-frequency transformations of yeast: autonomous replication of hybrid DNA molecules. Proc. Natl. Acad. Sci. USA 76:1035–1039.
   PubMed Web of Science ®Google Scholar
• Vallet, I.-M., Rahire M., and Rochaix J.-D.. 1984. Localization and sequence analysis of chloroplast DNA sequences of Chlam-vdomonas reinhardii that promote autonomous replication in yeast. EMBO J. 3:415–421.
   PubMedGoogle Scholar
• van Dijken, J. P., Otto R., and Harder W.. 1976. Growth of Hansenula polvmorpha in a methanol limited chemostat. Physiological responses due to the involvement of methanol oxidase as a key enzyme in methanol metabolism. Arch. Microbiol. 111:137–144.
   PubMedGoogle Scholar
• Wahl, G. M., Stern M., and Stark G. R.. 1979. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxy-methyl-paper and rapid hybridization by using dextran sulfate. Proc. Natl. Acad. Sci. USA 76:3683–3687.
   PubMed Web of Science ®Google Scholar
• Zakian, V. A., and Scott J. F.. 1982. Construction, replication, and chromatin structure of TRPl RI circle, a multiple-copy synthetic plasmid derived from Saccharomyces cerevisiae chromosomal DNA. Mol. Cell. Biol. 2:221–232.
   PubMed Web of Science ®Google Scholar