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Research Article

Frameshift Suppressor Mutations Outside the Anticodon in Yeast Proline tRNAs Containing an Intervening Sequence

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Pages 1760-1771 | Received 28 Nov 1984, Accepted 26 Mar 1985, Published online: 31 Mar 2023

LITERATURE CITED

  • Bach, M., Lacroute F., and Botstein D.. 1979. Evidence for transcriptional regulation of orotidine-5′-phosphate decarboxylase in yeast by hybridization of mRNA to the yeast structural gene cloned in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 76:386–390.
  • Bossi, L., and Roth J. R.. 1980. The influence of codon context of genetic code translation. Nature (London) 286:123–127.
  • Botstein, D., Falco S. C., Stewart S. E., Brennan M., Scherer S., Stinchcomb D. T., Struhl K., and Davis R. W.. 1979. Sterile host yeasts (SHY): a eukaryotic system of biological containment for recombinant DNA experiments. Gene 8:17–24.
  • Broach, J. R., Strathern J. N., and Hicks J. B.. 1979. Transformation in yeast: development of a hybrid cloning vector and isolation of the CAN1 gene. Gene 8:121–133.
  • Brodeur, G. M., Sandmeyer S. B., and Olson M. V.. 1983. Consistent association between sigma elements and tRNA genes in yeast. Proc. Natl. Acad. Sci. U.S.A. 80:3292–3296.
  • Chisholm, G. E., Genbauffe F. S., and Cooper T. G.. 1984. tau, a repeated DNA sequence in yeast. Proc. Natl. Acad. Sci. U.S.A. 81:2965–2969.
  • Culbertson, M. R., Charnas L., Johnson M. T., and Fink G. R.. 1977. Frameshifts and frameshift suppressors in Saccharomyces cerevisiae. Genetics 86:745–764.
  • Cummins, C. M., and Culbertson M. R.. 1981. Molecular cloning of the SUF2 frameshift suppressor gene from Saccharomyces cerevisiae. Gene 14:263–278.
  • Cummins, C. M., Donahue T. F., and Culbertson M. R.. 1982. Nucleotide sequence of the SUF2 frameshift suppressor gene of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U.S.A. 79:3565–3569.
  • Cummins, C. M., Gaber R. F., Culbertson M. R., Mann R., and Fink G. R.. 1980. Frameshift suppression in Saccharomyces cerevisiae. III. Isolation and genetic properties of group III suppressors. Genetics 95:855–875.
  • Del Rey, F. J., Donahue T. F., and Fink G. R.. 1982. Sigma, a repetitive element found adjacent to tRNA genes of yeast. Proc. Natl. Acad. Sci. U.S.A. 79:4138–4142.
  • Donahue, T. F., Farabaugh P. J., and Fink G. R.. 1981. Suppressible four base glycine and proline codons. Science 212:455–457.
  • Gaber, R. F., and Culbertson M. R.. 1982. The yeast frameshift suppressor gene SUF 16-1 encodes an altered glycine tRNA containing the four base anticodon 3′-CCCG-5′. Gene 19:163–172.
  • Gaber, R. F., and Culbertson M. R.. 1982. Frameshift suppression in Saccharomyces cerevisiae. IV. New suppressors among spontaneous corevertants of the group II his4-206 and leu2-3 frameshift mutations. Genetics 101:345–367.
  • Gaber, R. F., and Culbertson M. R.. 1984. Codon recognition during frameshift suppression in Saccharomyces cerevisiae. Mol. Cell. Biol. 4:2052–2061.
  • Gafner, J., DeRobertis E. M., and Philippsen P.. 1983. Delta sequences in the 5′ non-coding region of yeast tRNA genes. EMBO J. 2:583–591.
  • Gafner, J., and Philippsen P.. 1980. The yeast transposon TY1 generates duplications of target DNA on insertion. Nature (London) 286:414–418.
  • Gauss, D. H., and Sprinzl M.. 1984. Compilation of tRNA sequences. Nucleic Acids Res. 12:1–58.
  • Gorini, L. 1974. Streptomycin and misreading of the genetic code, p. 791–803. In Nomura M., Tissieres A., and Lengyel P. (ed.), Ribosomes. Cold Spring Harbor Laboratories, Cold Spring Harbor, N.Y.
  • Hicks, J. B., and Fink G. R.. 1977. Identification of chromosomal location of yeast DNA from hybrid plasmid pYeleulO. Nature (London) 269:265–267.
  • Hinnen, A., Hicks J. B., and Fink G. R.. 1978. Transformation of yeast. Proc. Natl. Acad. Sci. U.S.A. 75:1229–1233.
  • Ingolia, T. D., Craig E. A., and McCarthy B. J.. 1980. Sequence of three copies of the gene for the major Drosophila heat shock induced protein and their flanking regions. Cell 21:669–679.
  • Johnson, R. A., and Walseth T. F.. 1979. The enzymatic preparation of [α-32P]ATP, [α-32P]GTP, [32P]cAMP, and [32P]cGMP and their use in the assay of adenylate and guanylate cyclases and cyclic nucleotide phosphodiesterases. Adv. Cyclic Nucleotide Res. 10:135–167.
  • Krayev, A. S., Kramerov D. A., Skryabin K. G., Ryskov A. P., Bayev A. A., and Georgiev G. P.. 1980. The nucleotide sequence of the ubiquitous repetitive DNA sequence Bl complementary to the most abundant class of mouse fold-back RNA. Nucleic Acids Res. 8:1201–1215.
  • Lee, M., and Knapp G.. 1985. Transfer RNA splicing in Saccharomyces cerevisiae. J. Biol. Chem. 260:3108–3115.
  • Maniatis, T., Jeffrey A., and Kleid D. G.. 1975. Nucleotide sequence of the rightward operator of phage X. Proc. Natl. Acad. Sci. U.S.A. 72:1184–1188.
  • Maxam, A. M., and Gilbert W.. 1980. Sequencing end-labelled DNA with base-specific chemical cleavages. Methods Enzymol. 65:499–560.
  • Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
  • Mortimer, R. K., and Schild D. L.. 1980. Genetic map of Saccharomyces cerevisiae. Microbiol. Rev. 44:519–571.
  • Murgola, E. J., Pagel F. T., and Hijazi K. A.. 1984. Codon context effects in missense suppression. J. Mol. Biol. 175: 19–28.
  • Ogden, R. C, Lee M., and Knapp G.. 1984. Transfer RNA splicing in Saccharomyces cerevisiae: defining the substrates. Nucleic Acids Res. 12:9367–9382.
  • Olson, M. V., Loughney K., and Hall B. D.. 1979. Identification of the yeast DNA sequences that correspond to specific tyro-sine-inserting nonsense suppressor loci. J. Mol. Biol. 132:387–410.
  • Orr-Weaver, T., Szostak J. W., and Rothstein R. J.. 1981. Yeast transformation: a model system for the study of recombination. Proc. Natl. Acad. Sci. U.S.A. 78:6354–6358.
  • Perkins, D. D. 1949. Biochemical mutants in the smut fungus Ustilago maydis. Genetics 34:607–626.
  • Petes, T. D., Broach J. R., Wensink P. C., Hereford L. M., Fink G. R., and Botstein D.. 1978. Isolation and analysis of recombinant DNA molecules containing yeast DNA. Gene 4:37–49.
  • Riddle, D., and Carbon J.. 1973. Frameshift suppression: a nucleotide addition to the anticodon of a glycine transfer RNA. Nature (London) New Biol. 242:230–234.
  • Rubin, C. M., and Schmid C. W.. 1980. Pyrimidine-specific chemical reactions useful for DNA sequencing. Nucleic Acids Res. 8:4613–4619.
  • Sherman, F. 1982. Suppression in the yeast Saccharomyces cerevisiae, p. 463–486. In Strathern J. N., Jones E. W., and Broach J. R. (ed.), The molecular biology of the yeast Saccharomyces: metabolism and gene expression. Cold Spring Harbor Laboratories, Cold Spring Harbor, N.Y.
  • Sherman, F., Fink G. R., and Lawrence C. W.. 1971. Methods in yeast genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
  • Smith, D. R., and Calvo J. M.. 1980. Nucleotide sequence of the E. coli gene coding for dihydrofolate reductase. Nucleic Acids Res. 8:2255–2274.
  • Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503–517.
  • Stinchcomb, D. T., Mann C., and Davis R. W.. 1982. Centromeric DNA from Saccharomyces cerevisiae. J. Mol. Biol. 158:157–179.
  • Stinchcomb, D. T., Thomas M., Kelly J., Selker E., and Davis R. W.. 1980. Eukaryotic segments capable of autonomous replication in yeast. Proc. Natl. Acad. Sci. U.S.A. 77:4559–4563.

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