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Research Article

Localization of Specific Topoisomerase I Interactions within the Transcribed Region of Active Heat Shock Genes by Using the Inhibitor Camptothecin

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Pages 141-148 | Received 19 Jun 1986, Accepted 19 Sep 1986, Published online: 31 Mar 2023

LITERATURE CITED

  • Anderson, K. V., and J. A. Lengyl. 1984. Histone gene expression in Drosophila development: multiple levels of gene regulation, p. 135–161. In G. S. Stein, J. L. Stein, and W. F. Marzluff (ed.), John Wiley & Sons, Inc., New York.
  • Baase, W. A., and J. C. Wang. 1974. An ω protein from Drosophila melanogaster. Biochemistry 13:4299–4303.
  • Berrios, M., N. Osheroff, and P. A. Fisher. 1985. In situ localization of DNA topoisomerase II, the major polypeptide component of the Drosophila nuclear matrix fraction. Proc. Natl. Acad. Sci. USA 82:4142–4146.
  • Bonven, J. B., E. Gocke, and O. Westergaard. 1985. A high affinity topoisomerase I binding sequence is clustered at DNase I hypersensitive sites in Tetrahymena R-chromatin. Cell 41:541–551.
  • Bullock, P., J. J. Champoux, and M. Botchan. 1985. Association of crossover points with topoisomerase I cleavage sites: a model for nonhomologous recombination. Science 230:954–958.
  • Cartwright, I. L., and S. C. R. Elgin. 1986. Nucleosomal instability and induction of new upstream protein-DNA associations accompany activation of four small heat shock protein genes in Drosophila melanogaster. Mol. Cell. Biol. 6:779–791.
  • Champoux, J. J., and R. Dulbecco. 1972. An activity from mammalian cells that untwists supercoiled DNA—a possible swivel for DNA replication. Proc. Natl. Acad. Sci. USA 69:143–146.
  • Chen, G. L., L. Yang, T. C. Rowe, B. D. Halligan, K. M. Tewey, and L. F. Liu. 1984. Nonintercalative antitumor drugs interfere with the breakage-reunion reaction of mammalian DNA topoisomerase II. J. Biol. Chem. 259:13560–13566.
  • Corees, V., R. Holmgren, R. Freund, R. Morimoto, and M. Meselson. 1980. Four heat shock proteins of Drosophila melanogaster coded within a 12-kilobase region in chromosome subdivision 67B. Proc. Natl. Acad. Sci. USA 77:5390–5393.
  • Costlow, N., and J. T. Lis. 1984. High-resolution mapping of DNase I-hypersensitive sites of Drosophila heat shock genes in Drosophila melanogaster and Saccharomyces cerevisiae. Mol. Cell. Biol. 4:1853–1863.
  • Craig, E. A., and B. J. McCarthy. 1980. Four Drosophila heat shock genes at 67B: characterization of recombinant plasmids. Nucleic Acids Res. 8:4441–4457.
  • DiNardo, S., K. Voekel, and R. Sternglanz. 1984. DNA topoisomerase II mutant of Saccharomyces cerevisiae: topoisomerase II is required for segregation of daughter molecules at the termination of DNA replication. Proc. Natl. Acad. Sci. USA 81:2616–2620.
  • Earnshaw, W. C., B. Halligan, C. A. Cooke, M. M. S Heck, and L. F. Liu. 1985. Topoisomerase II is a component of mitotic chromosome scaffolds. J. Cell Biol. 100:1706–1715.
  • Fisher, L. M. 1984. DNA supercoiling and gene expression. Nature (London) 307:686–687.
  • Fleishmann, G., G. Pflugfelder, E. K. Steiner, K. Javaherian, G. C. Howard, J. C. Wang, and S. C. R. Elgin. 1984. Drosophila DNA topoisomerase I is associated with transcriptionally active regions of the genome. Proc. Natl. Acad. Sci. USA 81:6958–6962.
  • Gellert, M. 1981. DNA topoisomerase. Annu. Rev. Biochem. 50:879–910.
  • Germond, J. E., J. Rouieve-Yaniv, M. Yaniv, and D. Brutlag. 1979. Nicking-Closing enzyme assembles nucleosome-like structures in vitro. Proc. Natl. Acad. Sci. USA 76:3779–3783.
  • Gilmour, D. S., J. T. Lis. 1985. In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster. Mol. Cell. Biol. 5:2009–2018.
  • Gilmour, D. S., G. Pflugfelder, J. C. Wang, and J. T. Lis. 1986. Topoisomerase I interacts with transcribed regions in Drosophila cells. Cell 44:401–407.
  • Goeke, E., B. J. Bonven, and O. Westergaard. 1983. A site and strand specific nuclease activity with analogies to topoisomerase I frames the rRNA gene of Tetrahymena. Nucleic Acids Res. 11:7661–7678.
  • Goto, T., and J. C. Wang. 1985. Cloning of yeast TOP1, the gene encoding topoisomerase I, and the construction of mutants defective in both DNA topoisomerase I and DNA topoisomerase II. Proc. Natl. Acad. Sci. USA 82:7178–7182.
  • Hackett, R. W., and J. T. Lis. 1983. Localization of the hsp83 transcript within a 3292 nucleotide sequence from the 63B heat shock locus of D. melanogaster. Nucleic Acids Res. 11:7011–7030.
  • Han, S., A. Udvardy, and P. Schedi. 1985. Novobiocin blocks the Drosophila heat shock response. J. Mol. Biol. 183:13–29.
  • Harland, R. M., H. Weintraub, and S. L. McKnight. 1983. Transcription of DNA injected into Xenopus oocytes is influenced by template topology. Nature (London) 302:38–43.
  • Heller, R. A., E. R. Shelton, V. Dietrich, S. C. R Elgin, and D. L. Brutlag. 1986. Multiple forms and cellular localization of Drosophila DNA topoisomerase II. J. Biol. Chem. 261:8063–8069.
  • Holm, C., T. Goto, J. C. Wang, and D. Botstein. 1985. DNA topoisomerase II is required at the time of mitosis in yeast. Cell 41:553–563.
  • Hsiang, Y.-H., R. Hertzberg, S. Hecht, and L. F. Liu. 1985. Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase I. J. Biol. Chem. 260:14873–14878.
  • Jackson, D. A., and P. R. Cook. 1985. Transcription occurs at a nucleoskeleton. EMBO J. 4:919–925.
  • Javaherian, K., Y.-C. Tse, and J. Vega. 1982. Drosophila topoisomerase I: isolation, purification, and characterization. Nucleic Acids Res. 10:6945–6955.
  • Kmiec, E. B., R. Masaru, and A. Worcel. 1986. Gyration is required for 5S RNA transcription from a chromatin template. Proc. Natl. Acad. Sci. USA 83:1305–1309.
  • Liu, L. F., T. C. Rowe, L. Yang, K. M. Tewey, and G. L. Chen. 1983. Cleavage of DNA by mammalian DNA topoisomerase II. J. Biol. Chem. 258:15363–15379.
  • Luchnik, A. N., V. V. Bakayev, I. B. Zbarsky, and G. P. Georgiev. 1982. Elastic torsional strain in DNA within a fraction of SV40 minichromosomes: relation to transcriptionally active chromatin. EMBO J. 1:1353–1358.
  • Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecular cloning; a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor. N. Y.
  • Messing, J. 1983. New M13 vectors for cloning. Methods EnzymoL 101:20–78.
  • Nedospasov, S. A., and G. P. Georgiev. 1980. Non-random cleavage of SV40 DNA in the compact minichromosome and free in solution by micrococcal nuclease. Biochem. Biophys. Res. Commun. 92:532–539.
  • O'Connor, D., and J. T. Lis. 1981. Two closely linked transcription units within the 63B heat shock puff locus of D. melanogaster display strikingly different regulation. Nucleic Acids Res. 9:5075–5092
  • Robinson, S. I., B. D. Nelkin, and B. Vogelstein. 1982. The ovalbumin gene is associated with the nuclear matrix of chicken oviduct cells. Cell 28:99–106.
  • Rowe, T. C., J. C. Wang, and L. F. Liu. 1986. In vivo localization of DNA topoisomerase II cleavage sites on Drosophila heat shock chromatin. Mol. Cell. Biol. 6:985–992.
  • Ryoji, M., and A. Worcel. 1984. Chromatin assembly in Xenopus oocytes: in vivo studies. Cell 37:21–32
  • Saavedra, R. A., and R. H. Huberman. 1986. Both DNA topoisomerase I and II relax 2 μ plasmid DNA in living yeast cells. Cell 45:65–70.
  • Sirotkin, K., and N. Davidson. 1982. Developmentally regulated transcription from Drosophila melanogaster chromosome site 67B. Dev. Biol. 89:196–210.
  • Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503–517.
  • Steiner, E. K., J. C. Eissenberg, and S. C. R. Elgin. 1984. A cytological approach to the ordering of events in gene activation using the Sgs-4 locus of Drosophila melanogaster. J. Cell Biol 99:233–238.
  • Uemura, T., and M. Yanagida. 1984. Isolation of type I and II DNA topoisomerase mutants from fission yeast: single and double mutants show different phenotypes in cell growth and chromatin organization. EMBO J. 3:1737–1744.
  • Villeponteau, B., M. Landell, and H. Martinson. 1984. Torsional stress promotes the DNAase I sensitivity of active genes. Cell 39:469–478.
  • Vosberg, P.-H. 1985. DNA topoisomerase: enzymes that control DNA conformation. Curr. Top. Microbiol. Immunol. 114:19–102.
  • Wahl, G. M., M. Stern, and G. M. Stark. 1979. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxy-methyl-paper and rapid hybridization by using dextran sulfate. Proc. Natl. Acad. Sci. USA 76:3683–3687.
  • Wang, J. C. 1973. Protein ω: a DNA swivelase from Escherichia coli? p. 163–174. In R. D. Wells and R. B. Inman (ed.), In DNA synthesis in vitro. University Park Press, Baltimore.
  • Wang, J. C. 1985. Topoisomerase. Annu. Rev. Genet. 54:665–698.
  • Weintraub, H., and M. Groudine. 1976. Chromosomal subunits in active genes have an altered conformation. Science 193:848–856.
  • Wu, C. 1980. The 5′ ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I. Nature (London) 286:854–860.
  • Wu, C., Y.-C. Wong, and S. C. R. Elgin. 1979. The chromatin structure of specific genes. II. Disruption of chromatin structure during gene activity. Cell 16:807–814.

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