82
Views
14
CrossRef citations to date
0
Altmetric
Research Paper

Brain segmentation in magnetic resonance human head scans using multi-seeded region growing

&
Pages 273-284 | Received 23 May 2013, Accepted 01 Nov 2013, Published online: 19 Dec 2013

References

  • Haacke EM, Brown RW, Thompson MR and Venkatesan R. Magnetic Resonance Imaging: Physical Principles and Sequence Design, 1999 (John Wiley & Sons, New York).
  • Woods RP, Grafton ST, Watson JDG, Sicotte NL and Mazziotta JC. Automated image registration: II intersubject validation of linear and nonlinear models. J. Comput. Assist. Tomogr., 1998, 22, 153–165.
  • Lee JM, Yoon U, Nam SM, Kim JH, Kim IY and Kim SI. Evaluation of automated and semi-automated skull-stripping algorithms using similarity index and segmentation error. Comput. Biol. Med., 2003, 33, 495–507.
  • Atkins MS, Siu K, Law B, Orchard JJ and Rosenbaum WL. Difficulties of T1 brain MRI segmentation techniques. Proc. SPIE, 2002, 4684, 1837–1844.
  • Smith SM. Fast robust automated brain extraction. Hum. Brain Mapp., 2002, 17, 143–155.
  • Shattuck DW, Sandor-Leahy SR, Schaper KA, Rottenberg DA and Leahy RM. Magnetic resonance image tissue classification using a partial volume model. NeuroImage, 2001, 13, 856–876.
  • Hahn KK and Peitgen HO. The skull stripping problem in MRI solved by single 3D watershed transform. Lect. Notes Comput. Sci., 2000, 935, 134–143.
  • Segonne F, Dale AM, Busa E, Glessner M, Salat D, Hahn HK and Fischl B. A hybrid approach to the skull stripping problem in MRI. NeuroImage, 2004, 22, 1060–1075.
  • Sadananthan AS, Zheng W, Chee WL and Zagorodnov V. Skull stripping using graph cuts. NeuroImage, 2010, 49, 225–239.
  • Zhuang AH, Valentino DJ and Toga AW. Skull stripping magnetic resonance images using a model-based level sets. NeuroImage, 2006, 32, 79–92.
  • Lao Z, Shen D and Davatzikas C. Statistical shape model for automatic skull stripping of brain images, Proc. 1st IEEE Int. Symp. on Biomedical imaging: ISBI 2002, Washington, DC, USA, June 2002, IEEE, pp. 855–858.
  • Park GJ and Lee C. Skull stripping based on region growing for magnetic resonance images. NeuroImage, 2009, 47, 1394–1407.
  • Carass A, Cuzzocreo J, Wheeler MB, Bazin PL, Resnick SM and Prince JL. Simple paradigm for extra-cerebral tissue removal: algorithm and analysis. NeuroImage, 2011, 56, 1982–1992.
  • Zhang H, Liu J, Zhu Z and Li H. An automated and simple method for brain MR image extraction. Biomed. Eng. Online, 2011, 10, 81.
  • Leung KK, Barnes J, Modat M, Ridgway GR, Bartlett JW, Fox NC and Ourselin S. Brain MAPS: an automated, accurate and robust brain extraction technique using a template library. NeuroImage, 2011, 55, 1091–1108.
  • Hwang J, Han Y and Park H. Skull-stripping method for brain MRI using a 3D level set with a speedup operator. J. Magn. Reson. Imaging, 2011, 34, 445–456.
  • Eskildsen SF, Coupe P, Fonov V, Manjón JV, Leung KK, Guizard N, Wassef SN, Ostergaard LR and Collins DL. BEaST: brain extraction based on non-local segmentation technique. NeuroImage, 2012, 59, 2362–2373.
  • Galdames FJ, Jaillet F and Perez CA. An accurate skull stripping method based on simplex meshes and histogram analysis in magnetic resonance images. J. Neurosci. Methods, 2012, 206, 109–113.
  • Somasundram K and Kalavathi P. Contour-based brain segmentation method for magnetic resonance imaging human head scans. J. Comput. Assist. Tomogr., 2013, 37, 353–368.
  • Somasundram K and Kalavathi P. Analysis of imaging artifacts in MR brain images. Orient. J. Comput. Sci. Technol., 2012, 5, 135–141.
  • IBSR Dataset. Available at: <http://www.cma.mgh.harvard.edu/ibsr/index.html>, August 2012.
  • LPBA40 (LONI Probabilistic Brain Atlas). Available at: <http://www.loni.ucla.edu/Atlases/LPBA40/>, August 2012.
  • WBA (Whole Brain Atlas) MR brain image. Available at: <http://www.med.harvard.edu/AANLIB/home.html>, August 2012.
  • Somasundram K and Kalavathi P. Medical image binarization using square wave representation. Commun. Comput. Inf. Sci., 2011, 140, 151–158.
  • Somasundram K and Kalavathi P. Medical image contrast enhancement based on gamma correction. Int. J. Knowl. Manage. E-learn., 2011, 3, 15–18.
  • Gonzalez RC and Woods RE. Digital Image Processing, 1992 (Addison-Wesley Publishing Company, Reading, MA).
  • Haralick RM and Shapiro LG. Computer and Robot Vision — Volume I, 1992 (Addison-Wesley Publishing Company, Boston, MA).
  • Jain AK and Dubes RC. Algorithms for Clustering Data, 1998 (Prentice Hall, Englewood Cliffs, NJ).
  • Jaccard P. The distribution of flora in alpine zone. New Phytol., 1912, 11, 37–50.
  • Dice L. Measures of the amount of ecologic association between species. Ecology, 1945, 26, 297–302.
  • Hartley SM, Scher AL, Kort ESC, White LR and Launer LJ. Analysis and validation of automated skull stripping tools: a validation study based on 296 MR images from Honolulu Asia aging study. NeuroImage, 2006, 30, 1179–1186.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.