- 1) Snell, E. E. and Haskell, B. E., The metabolism of vitamin B6. In “Comprehensive Biochemistry” eds. Florkin, M. and Stotz, E. H., Elsevier/North Holland, New York, vol. 21, pp. 47-67 (1971).
- 2) Nelson, M. J. and Snell, E. E., Enzymes of vitamin B6 degradation. Purification and properties of 5-pyridoxic acid oxygenase from Arthrobacter sp. J. Biol. Chem., 261, 15115-15120 (1986).
- 3) Sundaram, T. K. and Snell, E. E., The bacterial oxidation of vitamin B6. V. The enzymatic formation of pyridoxal and isopyridoxal from pyridoxine. J. Biol. Chem., 244, 2577-2584 (1969).
- 4) Trongpanich, Y., Abe, K., Kaneda, Y., Morita, T., and Yagi, T., Purification and characterization of pyridoxal 4-dehydrogenase from Microbacterium luteolum. Biosci. Biotechnol. Biochem., in press.
- 5) Yagi, T., Kirino, J., Yamamoto, S., and Nozaki, M., A simple preparation method for apoaspartate aminotransferase from Escherichia coli B, and its application for the assay of pyridoxal and pyridoxamine 5′-phosphate. J. Biochem. (Tokyo) 98, 921-926 (1985).
- 6) Wada, H. and Snell, E. E., The enzymatic oxidation of pyridoxine and pyridoxamine phosphate. J. Biol. Chem., 236, 2089-2095 (1961).
- 7) Fossati, P., Principe, L., and Berti, G., Use of 3,5-dichloro-2-hydroxybenzenesulfonic acid/4-aminophenazone chromogenic system in direct enzymic assay of uric acid in serum and urine. Clin. Chem., 26, 227-231 (1980).
- 8) Bradford, M. M., A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Chem., 72, 248-254 (1976).
- 9) Laemmli, U. K., Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685 (1970).
- 10) Saito, H. and Miura, K., Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim. Biophys. Acta, 72, 619-629 (1963).
- 11) Nakano, M., Morita, T., Yamamoto, T., Sano, H., Ashiuchi, M., Masui, R., Kuramitsu, S., and Yagi, T., Purification, molecular cloning, and catalytic activity of Schizosaccharomyces pombe pyridoxal reductase. A possible additional family in the aldo-keto reductase superfamily. J. Biol. Chem., 274, 23185-23190 (1999).
- 12) Yagi, T., Tanouchi, A., and Hiraoka, Y., Growth phase-dependent active transport of pyridoxine in a fission yeast, Schizosaccharomyces pombe. FEMS Microbial. Lett., 161, 145-150 (1998).
- 13) Carmine, T. C., Bruchelt, G., Hahn, T., and Nielthammer, D., Measurement of endogenous and TNF α-mediated H2O2 production in supernatants of SK-N-SH neuroblastoma cells with an enhanced chemiluminescence assay. J. Biolumin. Chemilumin., 9, 267-272 (1994).
- 14) Tsuge, H. and Nakanishi, Y., Activity staining for flavoprotein oxidase. Methods Enzymol., 66, 344-350 (1980).
- 15) Davis, B. J., Method and application to human serum proteins. Ann. NY. Acad. Sci., 121, 404-427 (1964).
- 16) Kaneko, T., Nakamura, Y., Sato, S., Asamizu, E., Kato, T., Sasamoto, S., Watanabe, A., Idesawa, K., Ishikawa, A., Kawashima, K., Kimura, T., Kishida, Y., Kiyokawa, C., Kohara, M., Matsumoto, M., Matsuno, A., Mochizuki, Y., Nakayama, S., Nakazaki, N., Shimpo, S., Sugimoto, M., Takeuchi, C., Yamada, M., and Tabata, S., Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res., 7, 381-406 (2000).
- 17) White, O., Eisen, J. A., Heidelberg, J. F., Hickey, E. K., Peterson, J. D., Dodson, R. J., Haft, D. H., Gwinn, M. L., Nelson, W. C., Richardson, D. L., Moffat, K. S., Qin, H., Jiang, L., Pamphile, W., Crosby, M., Shen, M., Vamathevan, J. J., Lam, P., McDonald, L., Utterback, T., Zalewski, C., Makarova, K. S., Aravind, L., Daly. M. J., Minton, K. W., Fleisschmann, R. D., Ktchum, K. A., Nelson, K. E., Salzberg, S., Smith, H. O., Venter, J. C., and Fraser, C. M., Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science, 286, 1571-1577 (1999).
- 18) Boyd, L. A., Adam, L., Pelcher, L. E., McHughen, A., Hirji, R., and Selvaraj, G., Characterization of an Escherichia coli gene encoding betaine aldehyde dehydrogenase (BADH): structural similarity to mammalian ALDHs and a plant BADH. Gene, 103, 45-52 (1991).
- 19) James, K. D. and Williams, P. A., Ntn genes determining the early steps in the divergent catabolism of 4-nitrotoluene and toluene in Pseudomonas sp. strain TW3. J. Bacteriol., 180, 2043-2049 (1998).
- 20) Frederick, K. R., Tung, J., Emerick, R. S., Masiarz, F. R., Chamberlain, S. H., Vasavada, A., Rosenberg, S., Chakraborty, S., Schopter, L. M., and Massey, V., Glucose oxidase from Aspergillus niger. Cloning, gene sequence, secretion from Saccharomyces cerevisiae and kinetic analysis of a yeast-derived enzyme. J. Biol. Chem., 265, 3793-3802 (1990).
- 21) Lam, H. M. and Winkler, M. E., Characterization of the complex pdxH-tryS operon of Escherichia coli K-12 and pleiotropic phenotypes caused by pdxH insertion mutations. J. Bacteriol., 174, 6033-6045 (1992).
- 22) Chaiyen, P., Ballou, D. P., and Massey, V., Gene cloning, sequence analysis, and expression of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase. Proc. Natl. Acad. Sci. USA, 94, 7233-7238 (1997).
- 23) Ito, M., Matsuo, Y., and Nishikawa, K., Prediction of protein secondary structure using the 3D-1D compatibility algorithm. Comput. Appl. Biosci., 13, 415-424 (1997).
- 24) Hecht, H. J., Kalisz, H. M., Hendle, J., Schmid, R. D., and Schomburg, D., Crystal structure of glucose oxidase from Aspergillus niger refined at 2.3 Å resolution. J. Mol. Biol., 229, 153-172 (1993).
Bioscience, Biotechnology, and Biochemistry
Volume 66, 2002 - Issue 5