Advanced search
Publication Cover
Bioscience, Biotechnology, and Biochemistry Volume 69, 2005 - Issue 12
Journal homepage
941
Views
91
CrossRef citations to date
0
Altmetric
Original Articles

Isolation and Functional Analysis of Cytochrome P450 CYP153A Genes from Various Environments

Mitsutoshi KUBOTAMarine Biotechnology Institute
,
Miho NODATEMarine Biotechnology Institute
,
Mina YASUMOTO-HIROSEMarine Biotechnology Institute
,
Taku UCHIYAMAMarine Biotechnology Institute
,
Osamu KAGAMIMarine Biotechnology Institute
,
Yoshikazu SHIZURIMarine Biotechnology Institute
&
Norihiko MISAWAMarine Biotechnology Institute
 show all
Pages 2421-2430 | Received 01 Aug 2005, Accepted 20 Aug 2005, Published online: 22 May 2014

  • 1) Takemori, S., Yamazaki, T., and Ikuchiro, S., “Cytochrome P450” 2nd ed., VCH Publishers, New York (1993).
  • 2) Urlacher, V. B., Lutz-Wahl, S., and Schmid, R. D., Microbial P450 enzymes in biotechnology. Appl. Microbiol. Biotechnol., 64, 317–325 (2004).
  • 3) Grogan, G., Roberts, G. A., Parsons, S., Turner, N. J., and Flitsch, S. L., P450 (camr), a cytochrome P450 catalysing the stereospecific 6-endo-hydroxylation of (+)-camphor. Appl. Microbiol. Biotechnol., 59, 449–454 (2002).
  • 4) Narhi, L. O., and Fulco, A. J., Characterization of a catalytically self-sufficient cytochrome P-450 monooxygenase induced by barbiturates in Bacillus megaterium. J. Biol. Chem., 261, 7160–7169 (1986).
  • 5) Matson, R. S., Hare, R. S., and Fulco, A. J., Characteristics of a cytochrome P-450-dependent fatty acid omega-2 hydroxylase from Bacillus megaterium. Biochim. Biophys. Acta, 487, 487–494 (1977).
  • 6) Li, Q. S., Ogawa, J., Schmid, R. D., and Shimizu, S., Engineering cytochrome P450 BM-3 for oxidation of polycyclic aromatic hydrocarbons. Appl. Environ. Micrbiol., 67, 5735–5739 (2001).
  • 7) Bentley, S. D., Chater, K. F., Cerdeno-Tarraga, A. M., Challis, G. L., Thomson, N. R., James, K. D., Harris, D. E., Quail, M. A., Kieser, H., Harper, D., Bateman, A., Brown, S., Chandra, G., Chen, C. W., Collins, M., Cronin, A., Fraser, A., Goble, A., Hidalgo, J., Hornsby, T., Howarth, S., Huang, C. H., Kieser, T., Larke, L., Murphy, L., Oliver, K., O’Neil, S., Rabbinowitsch, E., Rajandream, M. A., Rutherford, K., Rutter, S., Seeger, K., Saunders, D., Sharp, S., Squares, R., Squares, S., Taylor, K., Warren, T., Wietzorrek, A., Woodward, J., Barrell, B. G., Parkhill, J., and Hopwood, D. A., Complete genome sequence of the model actinomycete Streptomyces coelicolor A3 (2). Nature, 417, 141–147 (2002).
  • 8) Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E. III, Tekaia, F., Badcock, K., Basham, D., Brown, D., Chillingworth, T., Connor, R., Davies, R., Devlin, K., Feltwell, T., Gentles, S., Hamlin, N., Holroyd, S., Hornsby, T., Jagels, K., Krogh, A., McLean, J., Moule, S., Murphy, L., Oliver, K., Osborne, J., Quail, M. A., Rajandream, M. A., Rogers, J., Rutter, S., Seeger, K., Skelton, J., Squares, R., Squares, S., Sulston, J. E., Taylor, K., Whitehead, S., and Barrell, B. G., Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature, 393, 537–544 (1998).
  • 9) Okuta, A., Ohnishi, K., and Harayama, S., PCR isolation of catechol 2,3-dioxygenase gene fragments from environmental samples and their assembly into functional genes. Gene, 212, 221–228 (1998).
  • 10) Maier, T., Forster, H. H., Asperger, O., and Hahn, U., Molecular characterization of the 56-kDa CYP153 from Acinetobacter sp. EB104. Biochem. Biophys. Res. Commun., 286, 652–658 (2001).
  • 11) van Beilen, J. B., Holtackers, R., Luscher, D., Bauer, U., Witholt, B., and Duetz, W. A., Biocatalytyc production of perillyl alcohol from limonene by using a novel Mycobacterium sp. cytochrome P450 alkane hydroxylase expressed in Pseudomonas putida. Appl. Environ. Microbiol., 71, 1737–1744 (2005).
  • 12) Nodate, M., Kubota, M., and Misawa, N., Functional expression system for cytochrome P450 genes using the reductase domain of self-sufficient P450RhF from Rhodococcus sp. NCIMB9784. Appl. Microbiol. Biotechnol., in press.
  • 13) Hunter, D. J., Roberts, G. A., Ost, T. W., White, J. H., Muller, S., Turner, N. J., Flitsch, S. L., and Chapman, S. K., Analysis of the domain properties of the novel cytochrome P450 RhF. FEBS Lett., 579, 2215–2220 (2005).
  • 14) Roberts, G. A., Grogan, G., Greter, A., Flitsch, S. L., and Turner, N. J., Identification of a new class of cytochrome P450 from a Rhodococcus sp. J. Bacteriol., 184, 3898–3908 (2002).
  • 15) Sambrook, J., and Russell, D. W., Molecular cloning: a laboratory manual, 3rd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (2001).
  • 16) Teramoto, M., Takaichi, S., Inomata, Y., Ikenaga, H., and Misawa, N., Structural and functional analysis of a lycopene β-monocyclase gene isolated from a unique marine bacterium that produces myxol. FEBS Lett., 545, 120–126 (2003).
  • 17) Peng, X., Shinodo, K., Kanoh, K., Inomata, Y., Choi, S.-K., and Misawa, N., Characterization of Sphingomonas aldehyde dehydrogenase catalyzing the conversion of various aromatic aldehydes to their carboxylic acids. Appl. Microbiol. Biotechnol., in press.
  • 18) Watanabe, K., Watanabe, K., Kodama, Y., Syutsubo, K., and Harayama, S., Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities. Appl. Environ. Microbiol., 66, 4803–4809 (2000).
  • 19) Uchiyama, T., Abe, T., Ikemura, T., and Watanabe, K., Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes. Nat. Biotechnol., 23, 88–93 (2005).
  • 20) Fujisawa, H., Murakami, M., and Manabe, T., Ecological studies on hydrocarbon-oxidizing bacteria in Japanese coastal waters (I). Bull. Jpn. Soc. Sci. Fish. (in Japanese), 43, 659–668 (1977).
  • 21) Higashihara, T., Sato, A., and Shimidu, U., An MPN method for the enumeration of marine hydrocarbon degrading bacteria. Bull. Jpn. Soc. Sci. Fish., 44, 1127–1134 (1978).
  • 22) Yasumoto-Hirose, M., Nishijima, M., Ngirchechol, M. K., Kanoh, K., Shizuri, Y., and Miki, W., Isolation of marine bacteria by in situ culture on media-supplemented polyurethane foam. Marine Biotechnol., in press.
  • 23) Silhavy, T. J., Berman, M. L., and Enquist, L. W., “Experiments with Gene Fusions”, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (1984).
  • 24) Fujii, T., Narikawa, T., Takeda, K., and Kato, J., Biotransformation of various alkanes using the Escherichia coli expressing an alkane hydroxylase system from Gordonia sp. TF6. Biosci. Biotechnol. Biochem., 68, 2171–2177 (2004).
  • 25) Misawa, N., Nakamura, R., Kagiyama, Y., Ikenaga, H., Furukawa, K., and Shindo, K., Synthesis of vicinal diols from various arenes with a heterocyclic, amino or carboxyl group by using recombinant Escherichia coli cells expressing evolved biphenyl dioxygenase and dihydrodiol dehydrogenase genes. Tetrahedron, 61, 195–204 (2005).
  • 26) Fieser, L. F., and Fieser, M., “Reagents for Organic Synthesis”, John Wiley and Sons, New York, pp. 135–139 (1967).
  • 27) Yakimov, M. M., Golyshin, P. N., Lang, S., Moore, E. R., Abraham, W. R., Lunsdorf, H., and Timmis, K. N., Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium. Int. J. Syst. Bacteriol., 48 (Pt 2), 339–348 (1998).
  • 28) Kasai, Y., Kishira, H., Syutsubo, K., and Harayama, S., Molecular detection of marine bacterial populations on beaches contaminated by the Nakhodka tanker oil-spill accident. Environ. Microbiol., 3, 246–255 (2001).
  • 29) Hara, A., Baik, S.-H., Syutsubo, K., Misawa, N., Smits, T. H., van Beilen, J. B., and Harayama, S., Cloning and functional analysis of alkB genes in Alcanivorax borkumensis SK2. Environ. Microbiol., 6, 191–197 (2004).
  • 30) van Beilen, J. B., Smits, T. H., Roos, F. F., Brunner, T., Balada, S. B., Rothlisberger, M., and Witholt, B., Identification of an amino acid position that determines the substrate range of integral membrane alkane hydroxylases. J. Bacteriol., 187, 85–91 (2005).

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.