Advanced search
Publication Cover
Bioscience, Biotechnology, and Biochemistry Volume 72, 2008 - Issue 1
Journal homepage
155
Views
2
CrossRef citations to date
0
Altmetric
Original Articles

Identification of the 4-Hydroxycinnamate Decarboxylase (PAD) Gene of Klebsiella oxytoca

Hirofumi UCHIYAMADivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University
,
Yasuyuki HASHIDOKODivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University
,
Yuhki KURIYAMADivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University
&
Satoshi TAHARADivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University
Pages 116-123 | Received 03 Aug 2007, Accepted 15 Oct 2007, Published online: 22 May 2014

  • 1) Kosuge, T., The role of phenolics in host response to infection. Annu. Rev. Phytopathol., 7, 195–222 (1969).
  • 2) Friend, J., Phenolic substances and plant disease. Annu. Proc. Phytochem. Soc., 25, 367–372 (1985).
  • 3) Hashidoko, Y., Urashima, M., Yoshida, T., and Mizutani, J., Decarboxylative conversion of hydroxycinnamic acids by Klebsiella oxytoca and Erwinia uredovora, epiphytic bacteria of Polymnia sonchifolia leaf, possibly associated with formation of microflora on the damaged leaves. Biosci. Biotechnol. Biochem., 57, 215–219 (1993).
  • 4) Hashidoko, Y., Urashima, M., and Mizutani, J., Cloning of a DNA fragment carrying the 4-hydroxycinnamate decarboxylase (PofK) gene from Klebsiella oxytoca, and its constitutive expression in Escherichia coli JM109 cells. Biosci. Biotechnol. Biochem., 58, 217–218 (1994).
  • 5) Zago, A., Degrassi, G., and Bruschi, C. V., Cloning, sequencing, and expression in Escherichia coli of the Bacillus pumilus gene for ferulic acid decarboxylase. Appl. Environ. Microbiol., 61, 4484–4486 (1995).
  • 6) Cavin, J.-F., Barthelmebs, L., and Divies, C., Molecular characterization of an inducible p-coumaric acid decarboxylase from Lactobacillus plantarum: gene cloning, transcriptional analysis, overexpression in Escherichia coli, purification, and characterization. Appl. Environ. Microbiol., 63, 1939–1944 (1997).
  • 7) Cavin, J.-F., Dartois, V., and Divies, C., Gene cloning, transcriptional analysis, purification, and characterization of phenolic acid decarboxylase from Bacillus subtilis. Appl. Environ. Microbiol., 64, 1466–1471 (1998).
  • 8) Barthelmebs, L., Lecomte, B., Divies, C., and Cavin, J.-F., Inducible metabolism of phenolic acids in Pediococcus pentosaceus is encoded by an autoregulated operon which involves a new class of negative transcriptional regulator. J. Bacteriol., 182, 6724–6731 (2000).
  • 9) Overhage, J., Prieffert, H., and Steinbuchel, A., Biochemical and genetic analyses of ferulic acid catabolism in Pseudomonas sp. strain HR199. Appl. Environ. Microbiol., 65, 4837–4847 (1999).
  • 10) Hashidoko, Y., Tanaka, T., and Tahara, S., Induction of 4-hydroxycinnamate decarboxylase in Klebsiella oxytoca cells exposed to substrate and non-substrate 4-hydroxycinnamate analogs. Biosci. Biotechnol. Biochem., 65, 2604–2612 (2001).
  • 11) Heidelberg, J. F., Eisen, J. A., Nelson, W. C., Clayton, R. A., Gwinn, M. L., Dodson, R. J., Haft, D. H., Hickey, E. K., Peterson, J. D., Umayam, L., Gill, S. R., Nelson, K. E., Read, T. D., Tettelin, H., Richardson, D., Ermolaeva, M. D., Vamathevan, J., Bass, S., Qin, H., Dragoi, I., Sellers, P., McDonald, L., Utterback, T., Fleishmann, R. D., Nierman, W. C., White, O., Salzberg, S. L., Smith, H. O., Colwell, R. R., Mekalanos, J. J., Venter, J. C., and Fraser, C. M., NA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature, 406, 477–483 (2000).
  • 12) Bell, K. S., Sebaihia, M., Pritchard, L., Holden, M. T. G., Hyman, L. J., Holeva, M. C., Thomson, N. R., Bentley, S. D. L., Churcher, J. C., Mungall, K., Atkin, R., Bason, N., Brooks, K., Chillingworth, T., Clark, K., Doggett, J., Fraser, A., Hance, Z., Hauser, H., Jagels, K., Moule, S., Norbertczak, H., Ormond, D., Price, C., Quail, M. A., Sanders, M., Walker, D., Whitehead, S., Salmond, G. P. C., Birch, P. R. J., Parkhill, J., and Toth, I. K., Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors. Proc. Nat. Acad. Sci. USA, 101, 11105–11110 (2004).
  • 13) Hashidoko, Y., and Tahara, S., Stereochemically specific proton transfer in decarboxylation of 4-hydroxycinnamic acids by 4-hydroxycinnamate decarboxylase from Klebsiella oxytoca. Arch. Biochem. Biophys., 359, 225–230 (1998).
  • 14) Asante, A., Tahara, S., and Hashidoko, Y., Screening of rhizobacteria possessing phenolic acid-decarboxylation abilities from several plant families. J. Res. Fac. Agric. Hokkaido Univ., accepted (2008).
  • 15) Hashidoko, Y., Itoh, E., Yokota, K., Yoshida, T., and Tahara, S., Characterization of five phyllosphere bacteria isolated from Rosa rugosa leaves, and their phenotypic and metabolic properties. Biosci. Biotechnol. Biochem., 66, 2474–2478 (2002).
  • 16) Cavin, J.-F., Barthelmebs, L., Guzzo, J., Van Beeumen, J., Bart, S., Travers, J. F., and Divies, C., Purification and characterization of an inducible p-coumaric acid decarboxylase from Lactobacillus plantarum. FEMS Microbiol. Lett., 147, 291–295 (1997).
  • 17) Huang, Z., Dostal, L., and Rosazza, J. P. N., Purification and characterization of a ferulic acid decarboxylase from Pseudomonas fluorescens. J. Bacteriol., 176, 5912–5918 (1994).
  • 18) Zdobnov, E. M., and Apweiler, R., InterProScan: an integration platform for the signature-recognition methods in InterPro. Bioinformatics, 17, 847–848 (2001).
  • 19) Barthelmebs, L., Divies, C., and Cavin, J.-F. O., Expression in Escherichia coli of native and chimeric phenolic acid decarboxylases with modified enzymatic activities and method for screening recombinant E. coli strains expressing these enzymes. Appl. Environ. Microbiol., 67, 1063–1069 (2001).
  • 20) Li, L., Bannantine, J. P., Zhang, Q., Amonsin, A., May, B. J., Alt, D., Banerji, N., Kanjilal, S., and Kapur, V., The complete genome sequence of Mycobacterium avium subspecies paratuberculosis. Proc. Natl. Acad. Sci. USA, 102, 12344–12349 (2005).
  • 21) Hashidoko, Y., Urashima, M., and Yoshida, T., Predominant epiphytic bacteria on damaged Polymnia sonchifolia leaves, and their metabolic properties on phenolics of plant origin. Biosci. Biotechnol. Biochem., 58, 1894–1896 (1994).
  • 22) Clausen, M., Lamb, C. J., Megnet, R., and Doerner, P. W., PAD1 encodes phenylacrylic acid decarboxylase which confers resistance to cinnamic acid in Saccharomyces cerevisiae. Gene, 142, 107–112 (1994).
  • 23) Edlin, D. A. N., Narbad, A., Gasson, M. J., Dickinson, J. R., and Lloyd, D., Purification and characterization of hydroxycinnamate decarboxylase from Brettanomyces anomalus. Enzyme Microbiol. Technol., 22, 232–239 (1998).
  • 24) Rangarajan, E. S., Li, Y., Innuzzi, P., Tocilj, A., Hung, L.-W., Matte, A., and Cygler, M., Crystal structure of a dodecameric FMN-dependent UbiX-like decarboxylase (Pad1) from Escherichia coli O157:H7. Protein Sci., 13, 3006–3016 (2004).

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.