In-Season Forecasting of Coho Salmon Marine Survival via Coded Wire Tag Recoveries

References

• Bilton , H. T. , Alderdice , D. F. and Schnute , J. T. 1982 . Influence of time and size at release of juvenile coho salmon (Oncorhynchus kisutch) on returns at maturity . Canadian Journal of Fisheries and Aquatic Sciences , 39 : 426 – 447 .
   Web of Science ®Google Scholar
• Bradford , M. J. , Myers , R. A. and Irvine , J. R. 2000 . Reference points for coho salmon (Oncorhynchus kisutch) harvest rates and escapement goals based on freshwater production . Canadian Journal of Fisheries and Aquatic Sciences , 57 : 677 – 686 .
   Web of Science ®Google Scholar
• Briscoe , R. J. , Adkison , M. D. , Wertheimer , A. and Taylor , G. S. 2005 . Biophysical factors associated with the marine survival of Auke Creek, Alaska, coho salmon . Transactions of the American Fisheries Society , 134 : 817 – 828 .
   Web of Science ®Google Scholar
• Claytor , R. R. 1996 . In-season management of Atlantic salmon (Salmo salar): an example using southern Gulf of St. Lawrence rivers . Canadian Journal of Fisheries and Aquatic Sciences , 53 : 1345 – 1359 .
   Web of Science ®Google Scholar
• Cole , J. , Boehlert , G. and de Witt , L. 2001 . “ Forecasting coho salmon survival in the Oregon Production Index region ” . In Workshop on factors affecting production of juvenile salmon , Edited by: Beamish , R. , Ishida , Y. , Karpenko , V. , Livingston , P. and Myers , K. 22 – 24 . Vancouver : North Pacific Anadromous Fish Commission .
   Google Scholar
• Coronado , C. and Hilborn , R. 1998 . Spatial and temporal factors affecting survival in coho salmon (Oncorhynchus kisutch) in the Pacific Northwest . Canadian Journal of Fisheries and Aquatic Sciences , 55 : 2067 – 2077 .
   Web of Science ®Google Scholar
• Expert Panel on the Future of the Coded Wire Tag Program for Pacific Salmon. 2005 . Pacific Salmon Commission, Technical Report 18 Vancouver Available: www.psc.org/pubs/psctr18.pdf. (June 2009)
   Google Scholar
• Fisheries and Oceans Canada. 2006 . A harvest strategy compliant with the precautionary approach , Fisheries and Oceans Canada, Canadian Science Advisory Secretariat . Science Advisory Report 2006/023
   Google Scholar
• Gelman , A. , Carlin , J. B. , Stern , H. S. and Rubin , D. B. 2004 . Bayesian Data Analysis, second edition , New York : Chapman and Hall .
   Google Scholar
• Haeseker , S. L. , Peterman , R. M. , Su , Z. and Wood , C. C. 2008 . Retrospective evaluation of preseason forecasting models for sockeye and chum salmon . North American Journal of Fisheries Management , 28 : 12 – 29 .
   Web of Science ®Google Scholar
• Hobday , A. J. and Boehlert , G. W. 2001 . The role of coastal ocean variation in spatial and temporal patterns in survival and size of coho salmon (Oncorhynchus kisutch) . Canadian Journal of Fisheries and Aquatic Sciences , 58 : 2021 – 2036 .
   Web of Science ®Google Scholar
• Holtby , L. 2000 . In-season indicators of run-strength and survival for northern British Columbia coho , Canadian Stock Assessment Secretariat . Research Document 2000/153
   Google Scholar
• Hyun , S. , Hilborn , R. , Anderson , J. J. and Ernst , B. 2005 . A statistical model for in-season forecasts of sockeye salmon (Oncorhynchus nerka) returns to the Bristol Bay districts of Alaska . Canadian Journal of Fisheries and Aquatic Sciences , 62 : 1665 – 1680 .
   Web of Science ®Google Scholar
• Johnson , J. K. 2004 . Regional review of coded-wire tagging of anadromous salmon and steelhead in northwest America Paper updated from 1989 to current year 2004. Available: www.psc.org. (August 2007)
   Google Scholar
• Koseki , Y. and Fleming , I. A. 2007 . Large-scale frequency dynamics of alternative male phenotypes in natural populations of coho salmon (Oncorhynchus kisutch): patterns, processes, and implications . Canadian Journal of Fisheries and Aquatic Sciences , 64 : 743 – 753 .
   Web of Science ®Google Scholar
• Link , M. R. and Peterman , R. M. 1998 . Estimating the value of in-season estimates of abundance of sockeye salmon (Oncorhynchus nerka) . Canadian Journal of Fisheries and Aquatic Sciences , 55 : 1408 – 1418 .
   Web of Science ®Google Scholar
• Logerwell , E. A. , Mantua , N. , Lawson , P. W. , Francis , R. C. and Agostini , V. N. 2003 . Tracking environmental processes in the coastal zone for understanding and predicting Oregon coho (Oncorhynchus kisutch) marine survival . Fisheries Oceanography , 12 : 554 – 568 .
   Web of Science ®Google Scholar
• Martin , A. D. and Quinn , K. M. 2006 . The Markov chain Monte Carlo (MCMC) Package Available: www.cran.r-project.org. (July 2008)
   Google Scholar
• Nickelson , T. E. 1986 . Influences of upwelling, ocean temperature, and smolt abundance on marine survival of coho (Oncorhynchus kisutch) salmon in the Oregon production area . Canadian Journal of Fisheries and Aquatic Sciences , 43 : 527 – 535 .
   Web of Science ®Google Scholar
• Peterman , R. M. , Pyper , B. J. and Grout , J. A. 2000 . Comparison of parameter estimation methods for detecting climate-induced changes in productivity of Pacific salmon (Oncorhynchus spp.) . Canadian Journal of Fisheries and Aquatic Sciences , 57 : 181 – 191 .
   Web of Science ®Google Scholar
• Peterman , R. M. , Pyper , B. J. , Lapointe , M. F. , Adkison , M. D. and Walters , C. J. 1998 . Patterns in covariation in survival rates of British Columbian and Alaskan sockeye salmon (Oncorhynchus nerka) stocks . Canadian Journal of Fisheries and Aquatic Sciences , 55 : 2503 – 2517 .
   Web of Science ®Google Scholar
• Peterman , R. M. and Steer , G. J. 1981 . Relation between sport-fishing catchability coefficients and salmon abundance . Transactions of the American Fisheries Society , 110 : 585 – 593 .
   Web of Science ®Google Scholar
• PSC (Pacific Salmon Commission). 2002 . Status of coho salmon stocks and fisheries in the Northern Boundary Area , PSC Northern Boundary Technical Committee . Report TCNB(02)-3
   Google Scholar
• Quinn , T. P. , Dickerson , B. R. and Vollestad , L. A. 2005 . Marine survival and distribution patterns of two Puget Sound hatchery populations of coho (Oncorhynchus kisutch) and chinook (Oncorhynchus tshawytscha) salmon . Fisheries Research , 26 : 209 – 220 .
   Google Scholar
• R Development Core Team. 2007 . R: a language and environment for statistical computing , Vienna : R Development Core Team . Available: www.R-project.org
   Google Scholar
• Robins , C. M. , Yang , Y. G. and Die , D. 1998 . The impact of global positioning systems and plotters on fishing power in the northern prawn fishery, Australia . Canadian Journal of Fisheries and Aquatic Sciences , 55 : 1645 – 1651 .
   Web of Science ®Google Scholar
• Sawada , J. , Holtby , L. B. and Finnegan , B. 2003 . Forecast for northern British Columbia coho salmon in 2003 , Canadian Science Advisory Board Secretariat . Research Document 2003/084
   Google Scholar
• Shaul , L. , McPhearson , S. , Jones , E. and Crabtree , K. 2004 . “ Stock status and escapement goals for coho salmon in Southeast Alaska ” . In Stock status and escapement goals for salmon stocks in Southeast Alaska , Edited by: Geiger , H. J. and McPherson , S. Juneau : Alaska Department of Fish and Game, Division of Sport Fish and Commercial Fisheries . Special Publication 04–02
   Google Scholar
• Shaul , L. , Weitkamp , L. , Simpson , K. and Sawada , J. 2007 . Trends in abundance and size of coho salmon in the Pacific Rim . North Pacific Anadromous Fish Commission Bulletin , 4 : 93 – 104 .
   Google Scholar
• Su , Z. and Adkison , M. D. 2002 . Optimal in-season management of pink salmon (Oncorhynchus gorbuscha) given uncertain run sizes and seasonal changes in economic value . Canadian Journal of Fisheries and Aquatic Sciences , 59 : 1648 – 1659 .
   Web of Science ®Google Scholar
• Wade , P. R. 2000 . Bayesian methods in conservation biology . Conservation Biology , 14 : 1308 – 1316 .
   Web of Science ®Google Scholar
• Walters , C. and Punt , A. 1994 . Placing odds on sustainable catch using virtual population analysis and survey data . Canadian Journal of Fisheries and Aquatic Sciences , 51 : 946 – 958 .
   Web of Science ®Google Scholar
• Weitkamp , L. and Neely , K. 2002 . Coho salmon (Oncorhynchus kisutch) ocean migration patterns: insight from marine coded-wire tag recoveries . Canadian Journal of Fisheries and Aquatic Sciences , 59 : 1100 – 1115 .
   Web of Science ®Google Scholar
• Wilberg , M. J. and Bence , J. R. 2006 . Performance of time-varying catchability estimators in statistical catch-at-age analysis . Canadian Journal of Fisheries and Aquatic Sciences , 63 : 2275 – 2285 .
   Web of Science ®Google Scholar
• Winters , G. H. and Wheeler , J. R. 1985 . Interactions between stock area, stock abundance, and catchability coefficient . Canadian Journal of Fisheries and Aquatic Sciences , 42 : 989 – 998 .
   Web of Science ®Google Scholar