Physical Habitat and Fish Assemblage Relationships with Landscape Variables at Multiple Spatial Scales in Wadeable Iowa Streams

References

• Allan , D. , Erickson , D. and Fay , J. 1997 . The influence of catchment land cover on stream integrity across multiple spatial scales . Freshwater Biology , 37 : 149 – 161 .
   Web of Science ®Google Scholar
• Beisel , J. N. , Usseglio-Polatera , P. , Thomas , S. and Moreteau , J. C. 1998 . Stream community structure in relation to spatial variation: the influence of mesohabitat characteristics . Hydrobiologia , 389 : 73 – 88 .
   Web of Science ®Google Scholar
• Berkman , H. E. and Rabeni , C. F. 1987 . Effect of siltation on stream fish communities . Environmental Biology of Fishes , 18 : 285 – 294 .
   Web of Science ®Google Scholar
• Bishop , R. A. 1981 . Iowa's wetlands . Proceedings of the Iowa Academy of Science , 88 : 11 – 16 .
   Google Scholar
• Bogue , A. G. 1963 . From prairie to corn belt: farming on the Illinois and Iowa prairies in the nineteenth century , Ames : Iowa State University Press .
   Google Scholar
• Bouchard , J. and Boisclair , D. 2008 . The relative importance of local, lateral, and longitudinal variables on the development of habitat quality models for a river . Canadian Journal of Fisheries and Aquatic Sciences , 65 : 61 – 73 .
   Web of Science ®Google Scholar
• Campell , K. L. , Kumar , S. and Johnson , H. P. 1972 . Stream straightening effects on flood-runoff characteristics . Transactions of the ASAE (American Society of Agricultural Engineers) , 15 : 94 – 98 .
   Google Scholar
• Caraco , D. , Claytor , R. , Hinkle , P. , Kwon , H. Y. , Schueler , T. , Swann , C. , Vysotsky , S. and Zielinske , J. 1998 . Rapid Watershed Planning Handbook , Ellicott City , Maryland : Center for Watershed Protection .
   Google Scholar
• Diana , M. , Allan , J. D. and Infante , D. 2006 . “ The influence of physical habitat and land cover on stream fish assemblages in southeastern Michigan ” . In Influences of landscapes on stream habitats and biological assemblages , Edited by: Hughes , R. M. , Wang , L. and Seelbach , P. W. 359 – 374 . Bethesda , Maryland : American Fisheries Society . Symposium 48
   Google Scholar
• Duehr , J. P. , Siepker , M. J. , Pierce , C. L. and Isenhart , T. M. 2007 . Relation of riparian buffer strips to in-stream habitat, macroinvertebrates and fish in a small Iowa stream . Journal of the Iowa Academy of Sciences , 113 : 49 – 55 .
   Google Scholar
• ESRI (Environmental Systems Research Institute) . 2008 . ESRI software support guide , Redlands , California : ESRI .
   Google Scholar
• Frissell , C. A. , Liss , W. J. , Warren , C. E. and Hurley , M. D. 1986 . A hierarchical framework for stream habitat classification: viewing streams in a watershed context . Environmental Management , 10 : 199 – 214 .
   Web of Science ®Google Scholar
• Garvey , J. E. , Budy , P. , Bunnell , D. , Hale , S. , Paukert , C. and Wright , R. 2007 . Farm Bill 2007: placing fisheries upstream of conservation provisions . Fisheries , 32 : 399 – 404 .
   Web of Science ®Google Scholar
• Gorman , O. T. and Karr , J. R. 1978 . Habitat structure and stream fish communities . Ecology , 59 : 507 – 515 .
   Web of Science ®Google Scholar
• Graham , R. L. , Liu , W. and English , B. C. The environmental benefits of cellulosic energy crops at a landscape scale . Proceedings of the Environmental Enhancement through Agriculture Conference . Boston
   Google Scholar
• Gregory , S. V. , Swanson , F. J. , McKee , W. A. and Cummins , K. W. 1991 . An ecosystem perspective of riparian zones: focus on links between land and water . BioScience , 41 : 540 – 551 .
   Web of Science ®Google Scholar
• Griffith , G. E. , Omernik , J. M. , Wilton , T. F. and Pierson , S. M. 1994 . Ecoregions and subregions of Iowa: a framework for water quality assessment and management . Journal of the Iowa Academy of Science , 101 : 5 – 13 .
   Google Scholar
• Gurnell , A. M. , Van Oosterhout , M. P. , De Vlieger , B. and Goodson , J. M. 2006 . Reach-scale interactions between aquatic plants and physical habitat: River Frome, Dorset . River Research and Applications , 22 : 667 – 680 .
   Web of Science ®Google Scholar
• Heitke , J. D. , Pierce , C. L. , Gelwicks , G. T. , Simmons , G. A. and Siegwarth , G. L. 2006 . “ Habitat, land cover, and fish assemblage relationships in Iowa streams: preliminary assessment in an agricultural landscape ” . In Influences of landscapes on stream habitats and biological assemblages , Edited by: Hughes , R. M. , Wang , L. and Seelbach , P. W. 287 – 304 . Bethesda , Maryland : American Fisheries Society . Symposium 48
   Google Scholar
• Hughes , R. M. , Wang , L. and Seelbach , P. W. , eds. 2006 . Influences of landscapes on stream habitats and biological assemblages , Symposium 48, Bethesda, Maryland American Fisheries Society .
   Google Scholar
• ISU (Iowa State University) . 2007 . Iowa geographic map server , Ames : Geographic Information Systems Support and Research Facility, Iowa State University . Available: ortho.gis.iastate.edu/ (January 2007)
   Google Scholar
• Jaynes , D. B. , Hatfield , J. L. , Olk , D. C. , Laird , D. A. and Kaspar , T. C. 2006 . “ Reducing nitrate contamination to surface waters from artificially drained soils ” . In Agricultural Research Service Report, Project 3625-12130-033 , Ames , Iowa : U.S. Department of Agriculture . Available: www.ars.usda.gov. (January 2007)
   Google Scholar
• Jordan , N. , Boody , G. , Broussard , W. , Glover , J. D. , Keeney , D. , McCown , B. H. , McIsaac , G. , Muller , M. , Murray , H. , Neal , J. , Pansing , C. , Turner , R. E. , Warner , K. and Wyse , D. 2007 . Sustainable development of the agricultural bio-economy . Science , 316 : 1570 – 1571 .
   PubMed Web of Science ®Google Scholar
• Karr , J. R. , Toth , L. A. and Dudley , D. R. 1985 . Fish communities of midwestern rivers: a history of degradation . Bioscience , 35 : 90 – 95 .
   Web of Science ®Google Scholar
• Kaufmann , P. R. , Larsen , D. P. and Faustini , J. M. 2009 . Bed stability and sedimentation associated with human disturbances in Pacific Northwest streams . Journal of the American Water Resources Association , 45 : 434 – 459 .
   Web of Science ®Google Scholar
• Kaufmann , P. R. , Levine , P. , Robinson , E. G. , Seeliger , C. and Peck , D. 1999 . Quantifying physical habitat in wadeable streams. EPA/620/R-99/003 , Corvallis , Oregon : U.S. Environmental Protection Agency, Office of Research and Development, Environmental Monitoring and Assessment Program .
   Google Scholar
• Lammert , M. and Allan , J. D. 1999 . Assessing biotic integrity of streams: effects of scale in measuring the influence of land cover/cover and habitat structure on fish and macroinvertebrates . Environmental Management , 23 : 257 – 270 .
   PubMed Web of Science ®Google Scholar
• Lee , K. H. , Isenhart , T. M. and Schultz , R. C. 2003 . Sediment and nutrient removal in an established multi-species riparian buffer . Journal of Soil and Water Conservation , 58 : 1 – 8 .
   Web of Science ®Google Scholar
• Litvan , M. E. , Stewart , T. W. , Pierce , C. L. and Larson , C. J. 2008 . Effects of grade control structures on the macroinvertebrate assemblage of an agriculturally-impacted stream . River Research and Applications , 24 : 218 – 233 .
   Web of Science ®Google Scholar
• Lyons , J. 1996 . Patterns in the species composition of fish assemblages among Wisconsin streams . Environmental Biology of Fishes , 45 : 329 – 341 .
   Web of Science ®Google Scholar
• Lyons , J. and Courtney , C. C. 1990 . “ A review of fisheries habitat improvement projects in warmwater streams, with recommendations for Wisconsin ” . In Technical Bulletin Number 169 , Madison : Wisconsin Department of Natural Resources .
   Google Scholar
• MacFarlane , M. B. 1983 . Structure of benthic macroinvertebrate communities in a midwestern plains stream . Freshwater Invertebrate Biology , 1 : 27 – 32 .
   Google Scholar
• Maul , J. D. , Farris , J. L. , Milarn , C. D. , Cooper , C. M. , Testa , S. III and Feldman , D. L. 2004 . The influence of stream habitat and water quality on macroinvertebrate communities in degraded streams of northwest Mississippi . Hydrobiologia , 518 : 79 – 94 .
   Web of Science ®Google Scholar
• Menzel , B. W. 1987 . “ Fish distribution ” . In Iowa fish and fishing , Edited by: Harlan , J. R. , Speaker , E. B. and Mayhew , J. 201 – 213 . Des Moines : Iowa Department of Natural Resources .
   Google Scholar
• Miller , D. 2006 . SMEX02 land surface information: soils database , Boulder , Colorado : National Snow and Ice Data Center . Available: nsidc.org. (January 2007)
   Google Scholar
• Natural Resources Conservation Service . 2000 . Natural resources inventory, 1997 summary report , Ames , Iowa : U.S. Department of Agriculture . Available: www.nrcs.usda.gov (January 2007)
   Google Scholar
• Oksanen , J. , Kindt , R. , Legendre , P. and O'Hara , B. 2007 . The VEGAN Package: community ecology package Available: cc.oulu.fi/∼jarioksa/ (January 2007)
   Google Scholar
• Paragamian , V. L. 1990 . Characteristics of channel catfish populations in streams and rivers of Iowa with varying habitats . Journal of the Iowa Academy of Science , 97 : 37 – 45 .
   Google Scholar
• Peck , D. V. , Herlihy , A. T. , Hill , B. H. , Hughes , R. M. , Kaufmann , P. R. , Klemm , D. J. , Lazorchak , J. M. , McCormick , F. M. , Peterson , S. A. , Ringold , P. L. , Magee , T. and Cappaert , M. R. 2006 . Environmental monitoring and assessment program—surface waters western pilot study: field operations manual for wadeable streams. EPA 600/R-06/003 , Washington , D.C. : U.S. Environmental Protection Agency, Office of Research and Development .
   Google Scholar
• Poff , N. L. 1997 . Landscape filters and species traits: towards mechanistic understanding and prediction in stream ecology . Journal of the North American Benthological Society , 16 : 391 – 409 .
   Web of Science ®Google Scholar
• Poff , N. L. and Allan , J. D. 1995 . Functional organization of stream fish assemblages in relation to hydrological variability . Ecology , 76 : 606 – 627 .
   Web of Science ®Google Scholar
• R Development Core Team . 2006 . R: a language and environment for statistical computing , R Foundation for Statistical Computing . Available: www.R-project.org (June 2006)
   Google Scholar
• Rabeni , C. F. and Sowa , S. P. 1996 . Integrating biological realism into habitat restoration and conservation strategies for small streams . Canadian Journal of Fisheries and Aquatic Sciences , 53 (Supplement 1) : 252 – 259 .
   Google Scholar
• Reice , S. R. , Wissmar , R. C. and Naiman , R. J. 1990 . Disturbance regimes, resilience, and recovery of animal communities and habitats in lotic ecosystems . Environmental Management , 14 : 647 – 659 .
   Web of Science ®Google Scholar
• Ribaudo , M. O. 1989 . “ Water quality benefits from the Conservation Reserve Program ” . In U.S. Department of Agriculture Technical Report PB-89-175624/XAB, USDA/AER-606 Washington , D.C.
   Google Scholar
• Richards , C. , Johnson , L. B. and Host , G. E. 1996 . Landscape-scale influences on stream habitats and biota . Canadian Journal of Fisheries and Aquatic Sciences , 53 (Supplement 1) : 295 – 311 .
   Google Scholar
• Robinson , M. and Rycroft , D. W. 1999 . “ The impact of drainage on streamflow ” . In Agricultural drainage , Edited by: Skaggs , R. W. and van Schilfgaarde , J. 767 – 800 . Madison , Wisconsin : American Society of Agronomy, Crop Science Society of America, Soil Science Society of America . Agronomy Monograph 38
   Google Scholar
• Rosgen , D. L. 1994 . A classification of natural rivers Catena , 22 : 169 – 199 .
   Google Scholar
• Roth , N. , Allan , J. D. and Erickson , D. 1996 . Landscape influences on stream biotic integrity assessed at multiple spatial scales . Landscape Ecology , 11 : 141 – 156 .
   Web of Science ®Google Scholar
• Rowe , D. C. 2007 . Relationships of fish assemblages, instream physical habitat, and landscape characteristics of wadeable Iowa streams , Ames : Iowa State University . Master's thesis
   Google Scholar
• Rowe , D. C. , Pierce , C. L. and Wilton , T. F. 2009 . Fish assemblage relationships with physical habitat in wadeable Iowa streams . North American Journal of Fisheries Management , 29 (this issue) : 1314 – 1332 .
   Web of Science ®Google Scholar
• SAS Institute . 1996 . SAS/STAT user's guide for personal computers, Version 6 , Cary , North Carolina : SAS Institute .
   Google Scholar
• Schlosser , I. J. 1982 . Fish community structure and function along two habitat gradients in a headwater stream . Ecological Monographs , 52 : 395 – 414 .
   Web of Science ®Google Scholar
• Shields , F. D. , Bowie , A. J. and Cooper , C. M. 1995 . Control of streambank erosion due to bed degradation with vegetation and structure . Water Research Bulletin , 31 : 475 – 489 .
   Google Scholar
• Simonson , T. D. and Lyons , J. 1995 . Comparison of catch per effort and removal procedures for sampling stream fish assemblages . North American Journal of Fisheries Management , 15 : 419 – 427 .
   Google Scholar
• Smith , D. D. 1981 . Iowa prairie—an endangered ecosystem . Proceedings of the Iowa Academy of Science , 88 : 7 – 10 .
   Google Scholar
• Smith , M. E. 2000 . Conservation Reserve Enhancement Program: a federal-state partnership. Agricultural Outlook. AGO-277, December Available: www.ers.usda.gov (June 2008)
   Google Scholar
• Stauffer , J. C. , Goldstein , R. M. and Newman , R. M. 2000 . Relationship of wooded riparian zones and runoff potential to fish community composition in agricultural streams . Canadian Journal of Fisheries and Aquatic Sciences , 57 : 307 – 316 .
   Web of Science ®Google Scholar
• Stevens , D. L. and Olsen , A. R. 1999 . Spatially restricted surveys over time for aquatic resources . Journal of Agricultural, Biological, and Environmental Statistics , 4 : 415 – 428 .
   Web of Science ®Google Scholar
• Thomson , G. W. and Hertel , H. G. 1981 . The forest resources of Iowa in 1980 . Proceedings of the Iowa Academy of Science , 88 : 2 – 6 .
   Google Scholar
• USEPA (U.S. Environmental Protection Agency) . 2004 . Analytical Tools Interface for Landscape Assessments. EPA/600/R-04/083 , Las Vegas , Nevada : USEPA, Office of Research and Development .
   Google Scholar
• USEPA . 2006 . Wadeable stream assessment: a collaborative survey of the Nation's streams. EPA/641/B-06/002 , Washington , D.C. : USEPA, Office of Water .
   Google Scholar
• Walser , C. A. and Bart , H. L. 1999 . Influence of agriculture on in-stream habitat and fish community structure in Piedmont watersheds of the Chattahoochee River system . Ecology of Freshwater Fish , 8 : 237 – 246 .
   Web of Science ®Google Scholar
• Wang , L. and Kanehl , P. 2003 . Influences of watershed urbanization and instream habitat on macroinvertebrates in cold water streams . Journal of the American Water Resources Association , 39 : 1181 – 1196 .
   Web of Science ®Google Scholar
• Wang , L. , Lyons , J. and Kanehl , P. 1998 . Development and evaluation of a habitat rating system for low gradient Wisconsin streams . North American Journal of Fisheries Management , 18 : 775 – 785 .
   Google Scholar
• Wang , L. , Lyons , J. and Kanehl , P. 2002 . Effects of watershed best management practices on habitat and fish in Wisconsin streams . Journal of the American Water Resources Association , 38 : 663 – 680 .
   Web of Science ®Google Scholar
• Wang , L. , Lyons , J. and Kanehl , P. 2003 . Impacts of urban land cover on trout streams in Wisconsin and Minnesota . Transactions of the American Fisheries Society , 132 : 825 – 839 .
   Web of Science ®Google Scholar
• Wang , L. , Lyons , J. , Kanehl , P. and Bannerman , R. 2001 . Impacts of urbanization on stream habitat and fish across multiple spatial scales . Environmental Management , 28 : 255 – 266 .
   PubMed Web of Science ®Google Scholar
• Wang , L. , Lyons , J. , Kanehl , P. and Gatti , R. 1997 . Influences of watershed land cover on habitat quality and biotic integrity in Wisconsin streams . Fisheries , 22 (6) : 6 – 12 .
   Web of Science ®Google Scholar
• Wang , L. , Seelbach , P. W. and Lyons , J. 2006 . “ Effects of levels of human disturbance on the influence of catchment, riparian, and reach-scale factors on fish assemblages ” . In Influences of landscapes on stream habitats and biological assemblages , Edited by: Hughes , R. M. , Wang , L. and Seelbach , P. W. 199 – 220 . Bethesda , Maryland : American Fisheries Society . Symposium 48
   Google Scholar
• Waters , T. F. 1995 . Sediment in streams: sources, biological effects and control , Bethesda , Maryland : American Fisheries Society .
   Google Scholar
• Whitney , G. G. 1994 . From coastal wilderness to fruited plain: a history of environmental change in temperate North America, 1500 to the present , Cambridge , , UK : Cambridge University Press .
   Google Scholar
• Whittier , T. R. and Paulsen , S. G. 1992 . The surface waters component of the Environmental Monitoring and Assessment Program (EMAP): an overview . Journal of Aquatic Ecosystem Health , 1 : 119 – 126 .
   Google Scholar
• Widenoja , R. 2007 . Destination Iowa: getting to a sustainable biofuels future , San Francisco : Sierra Club and Worldwatch Institute . Available: www.sierraclub.org. (June 2008)
   Google Scholar
• Wilton , T. F. 2004 . Biological assessment of Iowa's wadeable streams. Project completion report , Des Moines : Iowa Department of Natural Resources . Available: http://wqm.igsb.uiowa.edu. (January 2007)
   Google Scholar
• Yoder , C. O. and Smith , M. A. 1999 . “ Using fish assemblages in a state biological assessment and criteria program: essential concepts and considerations ” . In Assessing the sustainability and biological integrity of water resources using fish communities , Edited by: Simon , T. P. 17 – 56 . Boca Raton , Florida : CRC Press .
   Google Scholar
• Zaimes , G. N. , Schultz , R. C. and Isenhart , T. M. 2004 . Stream bank erosion adjacent to riparian forest buffers, row-crop fields, and continuously grazed pastures along Bear Creek in central Iowa . Journal of Soil and Water Conservation , 59 : 19 – 28 .
   Web of Science ®Google Scholar
• Zohrer , J. J. 2006 . “ Securing a future for fish and wildlife: a conservation legacy for Iowans ” . In Iowa Wildlife Action Plan (IWAP) Report , Des Moines : Iowa Department of Natural Resources . Available: www.iowadnr.gov. (June 2008)
   Google Scholar