Evaluating Surrogacy of Hatchery Releases for the Performance of Wild Yearling Chinook Salmon from the Snake River Basin

References

• Berggren, T., H. Franzoni, L. Basham, P. Wilson, H. Schaller, C. Petrosky, E. Weber, R. Boyce, N. Bouwes. 2005. Comparative survival study (CSS) of hatchery PIT-tagged spring/summer Chinook: Migration years 1997 – 2000 mark/recapture activities and bootstrap analysis. Report to Bonneville Power Administration, Portland, Oregon. Available: pisces.bpa.gov/release/documents (http://pisces.bpa.gov/release/documents) . (August 2009).
   Google Scholar
• Buchanan , R. A. and Skalski , J. R. 2007 . A migratory life-cycle release-recapture model for salmonid PIT-tag investigations . Journal of Agricultural, Biological, and Environmental Statistics , 12 : 325 – 345 .
   Web of Science ®Google Scholar
• Buchanan , R. A. , Skalski , J. R. and Broms , K. 2008 . “ Survival and transportation effects for migrating Snake River wild Chinook salmon and steelhead: Historical estimates from 1996–2004 and comparison to hatchery results. ” . In Monitoring and evaluation of smolt migration in the Columbia basin, volume XVII Portland, Oregon : Bonneville Power Administration . Available: bpa.gov/release/documents. (August 2009).
   Google Scholar
• Buchanan , R. A. , Skalski , J. R. , Lady , J. L. , Westhagen , P. , Griswold , J. and Smith , S. G. 2007 . “ Survival and transportation effects for migrating Snake River hatchery Chinook salmon and steelhead: Historical estimates from 1996–2003. ” . In Monitoring and evaluation of smolt migration in the Columbia Basin, volume XVI Portland, Oregon : Bonneville Power Administration . Available: pisces.bpa.gov/release/documents. (August 2009).
   Google Scholar
• Burner , C. J. 1951 . Characteristics of spawning nests of Columbia River salmon . U.S. Fish and Wildlife Service Fishery Bulletin , 61 : 97 – 110 .
   Google Scholar
• Cormack , R. M. 1964 . Estimates of survival from the sighting of marked animals . Biometrika , 51 : 429 – 438 .
   Web of Science ®Google Scholar
• Fuller , W. A. 1987 . Measurement error models New York : Wiley .
   Google Scholar
• Healey , M. C. 1991 . “ Life history of Chinook salmon (Oncorhynchus tshawytscha). ” . In Pacific salmon life histories Edited by: Groot , C. and Margolis , L. 313 – 393 . Vancouver : University of British Columbia Press .
   Google Scholar
• Hoffnagle , T. L. , Carmichael , R. W. , Frenyea , K. A. and Keniry , P. J. 2008 . Run timing, spawn timing, and spawning distribution of hatchery- and natural-origin spring Chinook salmon in the Imnaha River, Oregon . North American Journal of Fisheries Management , 28 : 148 – 164 .
   Web of Science ®Google Scholar
• Jolly , G. M. 1965 . Explicit estimates from capture–recapture data with both death and immigration: Stochastic model . Biometrika , 52 : 225 – 247 .
   PubMed Web of Science ®Google Scholar
• Knudsen , C. M. , Schroder , S. L. , Busack , C. A. , Johnston , M. V. , Pearsons , T. N. , Bosch , W. J. and Fast , D. E. 2006 . Comparison of life history traits between first-generation hatchery and wild upper Yakima River spring Chinook salmon . Transactions of the American Fisheries Society , 135 : 1130 – 1144 .
   Web of Science ®Google Scholar
• Lichatowich , J. 1999 . Salmon without rivers: A history of the Pacific salmon crisis Covelo, California : Island Press .
   Google Scholar
• Long , A. 2007 . Defining the “nature” protected by the Endangered Species Act: Lessons from hatchery salmon . New York University Environmental Law Journal , 15 : 420 – 492 .
   Google Scholar
• Muir, W. D., S. G. Smith, E. E. Hockersmith, S. Achord, R. F. Absolon, P. A. Ocker, B. M. Eppard, T. E. Ruehle, J. G. Williams, R. N. Iwamoto, J. R. Skalski. 1996. Survival estimates for the passage of the yearling Chinook salmon and steelhead through Snake River dams and reservoirs, 1995. Technical report to U.S. Army Corps of Engineers, Walla Walla District, and Bonneville Power Administration, Portland, Oregon. Available: pisces.bpa.gov/release/documents (http://www.bpa.gov) . (August 2009).
   Google Scholar
• Muir , W. D. , Smith , S. G. , Williams , J. G. , Hockersmith , E. E. and Skalski , J. R. 2001 . Survival estimates for migrant yearling Chinook salmon and steelhead tagged with passive integrated transponders in the lower Snake and lower Columbia rivers, 1993–1998 . North American Journal of Fisheries Management , 21 : 269 – 282 .
   Web of Science ®Google Scholar
• Mullan , J. W. , Rockhold , A. and Chrisman , C. R. 1992 . Life histories and precocity of Chinook salmon in the mid-Columbia River . Progressive Fish-Culturist , 54 : 25 – 28 .
   Web of Science ®Google Scholar
• NMFS (National Marine Fisheries Service). 2008a. Remand of the 2004 biological opinion on the Federal Columbia River Power System (FCRPS) including 19 Bureau of Reclamation projects in the Columbia basin (revised and reissued pursuant to court order, NWF v. NMFS, Civ. No. CV 01–640-RE (D. Oregon).) Available: nwr.noaa.gov/Salmon-Hydropower/Columbia-Snake-Basin/Final-BOs.cfm (http://www.nwr.noaa.gov/Salmon-Hydropower/Columbia-Snake-Basin/final-BOs.cfm) . (April 2010).
   Google Scholar
• NMFS (National Marine Fisheries Service). 2008b. Supplemental comprehensive analysis of the Federal Columbia River Power System and mainstream effects of the Upper Snake and other tributary actions. Available: nwr.noaa.gov/Salmon-Hydropower/Columbia-Snake-Basin/Final-BOs.cfm (http://www.nwr.noaa.gov/Salmon-Hydropower/Columbia-Snake-Basin/final-BOs.cfm) . (April 2010).
   Google Scholar
• Norden , R. H. 1972 . A survey of maximum likelihood estimation . International Statistical Review , 40 : 329 – 354 .
   Web of Science ®Google Scholar
• Raymond , H. 1988 . Effects of hydroelectric development and fisheries enhancement on spring and summer Chinook salmon and steelhead in the Columbia River Basin . North American Journal of Fisheries Management , 8 : 1 – 23 .
   Google Scholar
• Reisenbichler , R. R. and Rubin , S. P. 1999 . Genetic changes from artificial propagation of Pacific salmon affect the productivity and viability of supplemented populations . ICES Journal of Marine Science , 65 : 459 – 466 .
   Web of Science ®Google Scholar
• Roper , B. and Scarnecchia , D. L. 1996 . A comparison of trap efficiencies for wild and hatchery age-0 Chinook salmon . North American Journal of Fisheries Management , 16 : 214 – 217 .
   Google Scholar
• Schaller , J. , Wilson , P. , Haeseker , S. , Petrosky , C. , Tinus , E. , Dalton , T. , Woodin , R. , Weber , E. , Bouwes , N. , Berggren , T. , McCann , J. , Rassk , S. , Franzoni , H. and McHugh , P. 2007 . Comparative survival study (CSS) of PIT-tagged spring/summer Chinook and steelhead in the Columbia River Basin: Ten-year retrospective analyses report Portland, Oregon : Bonneville Power Administration . Available: pisces.bpa.gov/release/documents. (August 2009). Project 1996-0200
   Google Scholar
• Seber , G. A. F. 1965 . A note on the multiple recapture census . Biometrika , 52 : 249 – 259 .
   PubMed Web of Science ®Google Scholar
• Seber , G. A. F. 1982 . The estimation of animal abundance New York : Macmillan .
   Google Scholar
• Smith , S. G. , Muir , W. D. , Hockersmith , E. E. , Zabel , R. W. , Graves , R. J. , Ross , C. V. , Connor , W. P. and Arnsberg , B. D. 2003 . Influence of river conditions on survival and travel time of Snake River subyearling fall Chinook salmon . North American Journal of Fisheries Management , 23 : 939 – 961 .
   Web of Science ®Google Scholar
• Smith, S. G., W. D. Muir, R. W. Zabel, E. E. Hockersmith, G. A. Axel. 2002. Survival of hatchery subyearling fall Chinook salmon in the free-flowing Snake River and lower Snake River reservoirs, 1998–2001. Report to Bonneville Power Administration, Portland, Oregon. Available: pisces.bpa.gov/release/documents (http://www.bpa.gov) . (August 2009).
   Google Scholar
• Williams , J. G. , Smith , S. G. , Zabel , R. W. , Muir , W. D. , Scheuerell , M. D. , Sandford , B. P. , Marsh , D. M. , McNatt , R. A. and Achord , S. 2005 . “ Effects of the Federal Columbia River Power System on salmonid populations. ” . In NOAA Technical Memorandum NMFS-NWFSC-63
   Google Scholar
• Zabel , R. W. and Williams , J. G. 2002 . Selective mortality in Chinook salmon: What is the role of human disturbance? . Ecological Applications , 12 : 173 – 183 .
   Web of Science ®Google Scholar