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Special Report

Metalloproteomics: challenges and prospective for clinical research applications

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References

  • Bertini I, Gray HB, Stiefel EI, Valentine JS, editors. Biological inorganic chemistry: structure and reactivity. University Science Books; Sausalito, CA, USA; 2007
  • Finney LA, O'Halloran TV. Transition metal speciation in the cell: insights from the chemistry of metal ion receptors. Science 2003;300(5621):931-6
  • Frausto da Silva JJR, Willians RJP. The biological chemistry of the elements-the inorganic chemistry of life. Oxford University Press; Oxford, Newyork: 2001
  • Dupont CL, Yang S, Palenik B, Bourne PE. Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry. Proc Natl Acad Sci USA 2006;103(47):17822-7
  • Fosmire GJ. Zinc toxicity. Am J Clin Nutr 1990;51(2):225-7
  • Waldron KJ, Robinson NJ. How do bacterial cells ensure that metalloproteins get the correct metal? Nat Rev Microbiol 2009;7(2):25-35
  • Outten CE, O'Halloran TV. Femtomolar sensitivity of metalloregulatory proteins controlling zinc homeostasis. Science 2001;292(5526):2488-92
  • Banci L, Bertini I, Ciofi-Baffoni S, et al. Affinity gradients drive copper to cellular destinations. Nature 2010;465(7298):645-8
  • Cvetkovic A, Menon AL, Thorgersen MP, et al. Microbial metalloproteomes are largely uncharacterized. Nature 2010;466(7307):779-82
  • Vallee BL, Auld DS. Zinc coordination, function, and structure of zinc enzymes and other proteins. Biochemistry 1990;29(24):5647-59
  • Nies DH. Biochemistry. How cells control zinc homeostasis. Science 2007;317(5845):1695-6
  • Adams MJ, Blundell TL, Dodson GG, et al. Structure of rhombohedral 2 zinc insulin crystals. Nature 1969;224:491-5
  • Chausmer AB. Zinc, insulin and diabetes. J Am Coll Nutr 1998;17(2):109-15
  • Lovell MA, Robertson JD, Teesdale WJ, et al. Copper, iron and zinc in Alzheimer's disease senile plaques. J Neurol Sci 1998;158(1):47-52
  • Bush AI, Pettingell WH, Multhaup G, et al. Rapid induction of Alzheimer A beta amyloid formation by zinc. Science 1994;265(5177):1464-7
  • Minta A, Kao JP, Tsien RY. Fluorescent indicators for cytosolic calcium based on rhodamine and fluorescein chromophores. J Biol Chem 1989;264(14):8171-8
  • Mbatia HW, Burdette SC. Photochemical tools for studying metal ion signaling and homeostasis. Biochemistry 2012;51(37):7212-24
  • Domaille DW, Que EL, Chang CJ. Synthetic fluorescent sensors for studying the cell biology of metals. Nat Chem Biol 2008;4(3):168-75
  • Dean KM, Qin Y, Palmer AE. Visualizing metal ions in cells: an overview of analytical techniques, approaches, and probes. Biochim Biophys Acta 2012;1823(9):1406-15
  • Ingram P, Shelburne J, Roggli V, LeFurgey A. Biomedical applications of microprobe analysis. Academic Press; San Diego, CA: 1999
  • Paunesku T, Vogt S, Maser J, et al. X-ray fluorescence microprobe imaging in biology and medicine. J Cell Biochem 2006;99(6):1489-502
  • Garcia JS, de Magalhaes CS, Arruda MAZ. Trends in metal-binding and metalloprotein analysis. Talanta 2006;69(1):1-15
  • Szpunar J. Advances in analytical methodology for bioinorganic speciation analysis: metallomics, metalloproteomics and heteroatom-tagged proteomics and metabolomics. Analyst 2005;130:442-65
  • Tottey S, Waldron KJ, Firbank SJ, et al. Protein-folding location can regulate manganese-binding versus copper- or zinc-binding. Nature 2008;455(7216):1138-42
  • Becker JS, Lobinski R, Becker JS. Metal imaging in non-denaturing 2D electrophoresis gels by laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) for the detection of metalloproteins. Metallomics 2009;1:312-6
  • Chery CC, Gunther D, Cornelis R, et al. Detection of metals in proteins by means of polyacrylamide gel electrophoresis and laser ablation-inductively coupled plasma-mass spectrometry: application to selenium. Electrophoresis 2003;4(19-20):3305-13
  • Ma R, McLeod CW, Tomlinson K, Poole RK. Speciation of protein-bound trace elements by gel electrophoresis and atomic spectrometry. Electrophoresis 2004;25:2469-77
  • Neilsen JL, Abildtrup A, Christensen J, et al. Laser ablation inductively coupled plasma-mass spectrometry in combination with gel electrophoresis: a new strategy for speciation of metal binding serum proteins. Spectrochim Acta B Atomic Spectrosc 1998;53(2):339-45
  • Scott RA, Shokes JE, Cosper NJ, et al. Bottlenecks and roadblocks in high-throughput XAS for structural genomics. J Synch Rad 2005;12(Pt 1):19-22
  • Shi W, Punta M, Bohon J, et al. Characterization of metalloproteins by high-throughput X-ray absorption spectroscopy. Genome Res 2011;21(6):898-907
  • Marshall PS, Leavens B, Heudi O, Ramirez-Molina C. Liquid chromatography coupled with inductively coupled plasma mass spectrometry in the pharmaceutical industry: selected examples. J Chromatogr A 2004;1056(1-2):3-12
  • Gonzalez-Fernandez M, Garcia-Barrera T, Gomez-Ariza JL. Molecular mass spectrometric identification of superoxide dismutase in the liver of mice Mus musculus and Mus spretus using a metallomics analytical approach. Anal Bioanal Chem 2011;401(9):2779-83
  • Becker JS, Zoriy MV, Pickhardta C, Zillesb K. Copper, zinc, phosphorus and sulfur distribution in thin section of rat brain tissues measured by laser ablation inductively coupled plasma mass spectrometry: possibility for small-size tumor analysis. J Anal At Spectrom 2005;20(9):912-7
  • Chery CC, Chassaigne H, Verbeeck L, et al. Detection and quantification of selenium in proteins by means of gel electrophoresis and electrothermal vaporization ICP-MS. J Anal At Spectrom 2002;17(6):576-80
  • Becker JS, Pozebon D, Matusch A, et al. Detection of Zn-containing proteins in slug (Genus Arion) tissue using laser ablation ICP-MS after separation by gel electrophoresis. Int J Mass Spectrom 2011;307:66-9
  • Raimunda D, Khare T, Giometti C, et al. Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry. Metallomics 2012;4(9):921-7
  • Raimunda D, Padilla-Benavides T, Vogt S, et al. Periplasmic response upon disruption of transmembrane Cu transport in Pseudomonas aeruginosa. Metallomics 2013;5(2):144-51
  • Chevreux S, Roudeau S, Fraysse A, et al. Multimodal analysis of metals in copper-zinc superoxide dismutase isoforms separated on electrophoresis gels. Biochimie 2009;91(10):1324-7
  • Dong Y, Gao YX, Chen CY, et al. Quantification of trace elements in protein bands using synchrotron radiation X-ray fluorescence after electrophoretic separation. Chin J Anal Chem 2006;34(4):443-6
  • Gao YX, Liu YB, Chen CY, et al. Combination of synchrotron radiation X-ray fluorescence with isoelectric focusing for study of metalloprotein distribution in cytosol of hepatocellular carcinoma and surrounding normal tissues. J Anal At Spectrom 2005;20(5):473-5
  • Kuhbacher M, Weseloh G, Thomzig A, et al. Analysis and localization of metal- and metalloid-containing proteins by synchrotron radiation x-ray fluorescence spectrometry. X-Ray Spectrom 2005;34(2):112-7
  • Sussulini A, Garcia JS, Mesko MF, et al. Evaluation of soybean seed protein extraction focusing on metalloprotein analysis. Microchim Acta 2007;158(1-2):173-80
  • Verbi FM, Arruda SC, Rodriguez AP, et al. Metal-binding proteins scanning and determination by combining gel electrophoresis, synchrotron radiation X-ray fluorescence and atomic spectrometry. J Biochem Biophys Methods 2005;62(2):97-109
  • Weseloh G, Kuhbacher M, Bertelsmann H, et al. Analysis of metal-containing proteins by gel electrophoresis and synchrotron radiation X-ray fluorescence. J Radioanal Nucl Chem 2004;259(3):473-7
  • Finney L, Chishti Y, Khare T, et al. Imaging metals in proteins by combining electrophoresis with rapid x-ray fluorescence mapping. ACS Chem Biol 2010;5(6):577-87
  • Sevcenco AM, Krijger GC, Pinkse MW, et al. Development of a generic approach to native metalloproteomics: application to the quantitative identification of soluble copper proteins in Escherichia coli. J Biol Inorg Chem 2009;14(4):631-40
  • Sevcenco AM, Pinkse MW, Wolterbeek HT, et al. Exploring the microbial metalloproteome using MIRAGE. Metallomics 2011;3(12):1324-30

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