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Editorial

Will current technologies enable dinosaur proteomics?

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Pages 695-699 | Published online: 09 Jan 2014

References

  • Higuchi RG, Wrischnik LA, Oakes E, George M, Tong B, Wilson AC. Mitochondrial DNA of the extinct quagga: relatedness and extent of postmortem change. J. Mol. Evol.25, 283–287 (1987).
  • Thomas RH, Walter Schaffner W, Allan C. Wilson AC, Pääbo S. DNA phylogeny of the extinct marsupial wolf. Nature340, 465–467 (1989).
  • DeSalle Rob et al. DNA sequences from a fossil termite in oligo-miocene amber and their phylogenetic implications. Science257, 1933–1916 (1992).
  • Poinar GO Jr. The range of life in amber: significance and implications in DNA studies. Experientia50, 536–542 (1994).
  • Woodward SR, Weyand NJ, Bunnell M. DNA sequence from Cretaceous period bone fragments. Science661, 229–232 (1994).
  • Hedges SB, Schweitzer MH. Detecting dinosaur DNA. Science268, 1191–1192 (1995).
  • Austin JJ, Ross AJ, Smith AB, Fortey RA, Thomas RH. Problems of reproducibility – does geologically ancient DNA survive in amber-preserved insects. Proc. Biol. Sci.264, 467–474 (1997).
  • Abelson PH. Organic constituents of fossils. Carnegie Inst. Wash. Yrbk53, 94–101 (1954).
  • Bada JL, Wang XS, Poinar HN, Paabo S, Poinar GO. Amino acid racemization in amber-entombed insects: implications for DNA preservation. Geochim. Cosmochim. Acta58, 3131–3135 (1994).
  • Weiner S, Lowenstam HA, Hood L. Characterization of 80-million-year-old mollusk shell proteins. Proc. Natl Acad. Sci. USA73, 2541–2545 (1976).
  • Matter P, Davidson FD, Wyckoff RW. The composition of fossil oyster shell proteins. Proc. Natl Acad. Sci. USA64, 970–972 (1969).
  • Gurley LR, Valdez JG, Spall WD, Smith BF, Gillette DD. Proteins in the fossil bone of the dinosaur, Seismosaurus. J. Protein Chem.10, 75–90 (1991).
  • Schweitzer MH, Horner JR. Intravascular microstructures in trabecular bone tissues of Tyrannosaurus rex. Ann. Paleontol.85, 179–192 (1999).
  • Schweitzer MH, Marshall M, Carron K et al. Heme compounds in dinosaur trabecular bone. Proc. Natl Acad. Sci. USA94, 6291–6296 (1997).
  • Embery G, Milner A, Waddington RJ, Hall RC, Langley MS, Milan AM. The isolation and detection of non-collagenous proteins from the compact bone of the dinosaur Iguanodon. Connect. Tissue Res.41, 249–259 (2000).
  • Embery G, Milner AC, Waddington RJ, Hall RC, Langley MS, Milan AM. Identification of proteinaceous material in the bone of the dinosaur Iguanodon. Connect. Tissue Res.44, 41–46 (2003).
  • Muyzer G, Sandberg PA, Knapen MHJ, Vermeer C, Collins M, Westbroek P. Preservation of the bone protein osteocalcin in dinosaurs. Geology20, 871–874 (1992).
  • Collins MJ, Gernaey AM, Nielson-Marsh CM, Vermeer C, Westbroek P. Slow rates of degradation of osteocalcin: green light for fossil bone protein? Geology28, 1139–1142 (2000).
  • Chiappe LM, Coria RA, Dingus L, Jackson F, Chinsamy A, Fox M. Sauropod dinosaur embryos from the late Cretaceous of Patagonia. Nature396, 258–261 (1998).
  • Schweitzer MH, Chiappe L, Garrido AC, Lowenstein JM, Pincus SH. Molecular preservation in late Cretaceous sauropod dinosaur eggshells. Proc. Biol. Sci.272, 775–784 (2005).
  • Avci R, Schweitzer MH, Boyd, RD, Wittmeyer JL, Teran Arce F, Calvo JO. Preservation of bone collagen from the late Cretaceous period studied by immunological techniques and atomic force microscopy. Langmuir21, 3584–3590 (2005).
  • Schweitzer MH, Watt JA, Avci R et al. β-keratin specific immunological reactivity in feather-like structures of the Cretaceous alvarezarid, Shuvuuia deserti. J. Exp. Zool.285, 146–157 (1999).
  • Lindahl T. Instability and decay of the primary structure of DNA. Nature362, 709–715 (1993).
  • Ambler RP, Daniel M. Proteins and molecular palaeontology. Philos. Trans. R. Soc. Lond. B333, 381–389 (1991).
  • Schweitzer MH, Wittmeyer JL, Horner JR. Gender-specific reproductive tissue in ratites and Tyrannosaurus rex. Science308, 1456–1460 (2005).
  • Horner JR, Padian K. Age and growth dynamics of Tyrannosaurus rex. Proc. Biol. Sci.271, 1875–80 (2004).
  • Schweitzer MH, Wittmeyer JL, Horner JR, Toporski JK. Soft tissue vessels and cellular preservation in Tyrannosaurus rex. Science307, 1952–1955 (2005).
  • Schweitzer MH, Wittmeyer JL, Horner JR. Soft tissue vessels and cellular preservation in vertebrate skeletal elements from the Cretaceous to the present. Proc Biol Sci.274(1607), 183–197 (2007).
  • Schweitzer MH, Suo Z, Avci R et al. Analyses of soft tissue from Tyrannosaurus rex suggest the presence of protein. Science316, 277–280 (2007).
  • Asara JM, Garavelli JS, Slatter DA et al. Interpreting sequences from Mastadon and Tyrannosaurus rex. Science317, 1324–1325 (2007).
  • Asara JM, Schweitzer MH, Freimark LM, Phillips M, Cantley LC. Protein sequences from Mastodon and Tyrannosaurus rex revealed by mass spectrometry. Science316, 280–285 (2007).
  • Horneman DA, Ottens M, Hoorneman M, van der Wielen LAM, Tesson M. Reaction and diffusion during demineralization of animal bone. AlChE J.50, 2682–2690 (2004).
  • Jiang X, Ye M, Jiang X et al. Method development of efficient protein extraction in bone tissue for proteome analysis. J. Proteome Res.6, 2287–2294 (2007).
  • Fenselau C, Swatkowski S, Gutierrez P et al. Evaluation of residue-specific acid cleavage in proteomics workflows. Presented at: 6th HUPO World Congress. Seoul, Korea, October 6–10 2007.
  • Smejkal GB, Muddiman DC, Schweitzer MH, Collier TS, Kwan AT. Electrophoretic analyses of proteins and peptides isolated from cortical bone using a pressure cycling technology. Presented at: 3rd Annual US HUPO Conference. Seattle, WA, USA, March 5–8 2007.
  • Smejkal GB, Romanovsky I, Muddiman DC, Schweitzer MH, Collier TS, Kwan AT. Proteomic analyses of proteins isolated from mammalian bone using a pressure cycling technology. Presented at: 6th HUPO World Congress. Seoul, Korea, October 6–10 2007.
  • Schweitzer MH, Marshall CL. A molecular model for the evolution of endothermy in the theropod-bird lineage. J. Exp. Zool.291, 317–38 (2001).
  • Rothschild BM, Witzke BJ, Hershkovitz I. Metastatic cancer in the Jurassic. Lancet354, 398 (1999).
  • Rothschild BM, Tanke DH, Helbling M, Martin LD. Epidemiologic study of tumors in dinosaurs. Naturwissenschaften90, 495–500 (2003).

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