Multiplex PCR theranostics of severe respiratory infections

References

• WHO. The World Health Report 2004. Changing history. In: WHO Library Cataloguing-in-Publication Data. WHO, Geneva, Switzerland, 120–124 (2004).
   Google Scholar
• Drosten C, Günther S, Preiser W et al. Identification of a novel coronavirus in patients with severe acute respiratory syndrome. N. Engl. J. Med.348, 1967–1976 (2003).
   PubMed Web of Science ®Google Scholar
• van den Hoogen BG, de Jong JC, Groen J et al. A newly discovered human pneumovirus isolated from young children with respiratory tract disease. Nat. Med.7, 719–724 (2001).
   PubMed Web of Science ®Google Scholar
• Fouchier RA, Hartwig NG, Bestebroer TM et al. A previously undescribed coronavirus associated with respiratory disease in humans. Proc. Natl Acad. Sci. USA101, 6212–6216 (2004).
   PubMed Web of Science ®Google Scholar
• van der Hoek L, Pyrc K, Jebbink MF et al. Identification of a new human coronavirus. Nat. Med.10, 368–373 (2004).
   PubMed Web of Science ®Google Scholar
• Woo PC, Lau SK, Chu CM et al. Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia. J. Virol.79, 884–895 (2005).
   PubMed Web of Science ®Google Scholar
• Allander T, Tammi MT, Eriksson M, Bjerkner A, Tiveljung-Lindell A, Andersson B. Cloning of a human parvovirus by molecular screening of respiratory tract samples. Proc. Natl Acad. Sci. USA102, 12891–12896 (2005).
   PubMed Web of Science ®Google Scholar
• Gaynor AM, Nissen MD, Whiley DM et al. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog.3, e64 (2007).
   PubMed Web of Science ®Google Scholar
• Picard FJ, Bergeron MG. Rapid molecular theranostics in infectious diseases. Drug Discov. Today7, 1092–1101 (2002).
   PubMed Web of Science ®Google Scholar
• Fox JD. Nucleic acid amplification tests for detection of respiratory viruses. J. Clin. Virol.40, S15–S23 (2007).
   PubMed Web of Science ®Google Scholar
• Mahony JB. Detection of respiratory viruses by molecular methods. Clin. Microbiol. Rev.21, 707–747 (2008).
   Google Scholar
• Ieven M. Currently used nucleic acid amplification tests for the detection of viruses and atypicals in acute respiratory infections. J. Clin. Virol.40, 259–276 (2007).
   PubMed Web of Science ®Google Scholar
• Gröndahl B, Puppe W, Hoppe A, Kühne I, Weigl JAI, Schmitt H-J. Rapid identification of nine microorganisms causing acute respiratory tract infections by single-tube multiplex reverse transcription-PCR: feasibility study. J. Clin. Microbiol.37, 1–7 (1999).
   PubMedGoogle Scholar
• Bellau-Pujol S, Vabret A, Legrand L et al. Development of three multiplex RT-PCR assays for the detection of 12 respiratory RNA viruses. J. Virol. Methods126, 53–63 (2005).
   PubMed Web of Science ®Google Scholar
• Coiras MT, Aguilar JC, García ML, Casas I, Pérez-Breña P. Simultaneous detection of fourteen respiratory viruses in clinical specimens by two multiplex reverse transcription nested-PCR assays. J. Med. Virol.484–495 (2004).
   PubMedGoogle Scholar
• Li H, McCormac MA, Estes RW et al. Simultaneous detection and high-throughput identification of a panel of RNA viruses causing respiratory tract infections. J. Clin. Microbiol.45, 2105–2109 (2007).
   PubMed Web of Science ®Google Scholar
• Lee WM, Grindle K, Pappas T et al. High-throughput, sensitive, and accurate multiplex PCR-microsphere flow cytometry system for large-scale comprehensive detection of respiratory viruses. J. Clin. Microbiol.45, 2626–2634 (2007).
   PubMed Web of Science ®Google Scholar
• Mahony J, Chong S, Merante F et al. Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay. J. Clin. Microbiol.45, 2965–2970 (2007).
   PubMed Web of Science ®Google Scholar
• Kumar S, Wang L, Fan J et al. Detection of 11 common viral and bacterial pathogens causing community-acquired pneumonia or sepsis in asymptomatic patients by using a multiplex reverse transcription-PCR assay with manual (enzyme hybridization) or automated (electronic microarray) detection. J. Clin. Microbiol.46, 3063–3072 (2008).
   PubMed Web of Science ®Google Scholar
• Reijans M, Dingemans G, Klaassen CH et al. RespiFinder: a new multiparameter test to differentially identify fifteen respiratory viruses. J. Clin. Microbiol.46, 1232–1240 (2008).
   PubMed Web of Science ®Google Scholar
• Wang Y, Kong F, Yang Y, Gilbert GL. A multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay for detection of bacterial respiratory pathogens in children with pneumonia. Pediatr. Pulmonol.43, 150–159 (2008).
   PubMed Web of Science ®Google Scholar
• Kim SR, Ki CS, Lee NY. Rapid detection and identification of 12 respiratory viruses using a dual priming oligonucleotide system-based multiplex PCR assay. J. Virol. Methods156, 111–116 (2009).
   PubMed Web of Science ®Google Scholar
• Raymond F, Carbonneau J, Boucher N et al. Comparison of automated microarray detection with real-time PCR assays for detection of respiratory viruses in specimens obtained from children. J. Clin. Microbiol.47, 743–750 (2009).
   PubMed Web of Science ®Google Scholar
• Cannon GA, Carr MJ, Yandle Z et al. A low density oligonucleotide microarray for the detection of viral and atypical bacterial respiratory pathogens. J. Virol. Methods163, 17–24 (2010).
   PubMed Web of Science ®Google Scholar
• Mahony JB, Blackhouse G, Babwah J et al. Cost analysis of multiplex PCR testing for diagnosing respiratory virus infections. J. Clin. Microbiol.47, 2812–2817 (2009).
   PubMed Web of Science ®Google Scholar
• Paranhos-Baccalà G, Komurian-Pradel F, Richard N, Vernet G, Lina B, Floret D. Mixed respiratory virus infections. J. Clin. Virol.43, 407–410 (2008).
   PubMed Web of Science ®Google Scholar