References
- Alter HJ, Seeff LB. Recovery, persistence, and sequelae in hepatitis C virus infection: a perspective on long-term outcome. Semin. Liver Dis.20(1), 17–35 (2000).
- McHutchison JG, Lawitz EJ, Shiffman ML et al. Peginterferon α-2b or α-2a with ribavirin for treatment of hepatitis C infection. N. Engl. J. Med.361(6), 580–593 (2009).
- Zeuzem S, Berg T, Moeller B et al. Expert opinion on the treatment of patients with chronic hepatitis C. J. Viral Hepat.16(2), 75–90 (2009).
- Rossignol J, Elfert A, El-Gohary Y, Keeffe E. Improved virologic response in chronic hepatitis C genotype 4 treated with nitazoxanide, peginterferon, and ribavirin. Gastroenterology136(3), 856–862 (2009).
- Eroglu C, Pinarbasi E. Hepatitis C virus: genome organization, viral proteins and implications in disease pathogenesis. Turk. J. Biol.24, 253–269 (2000).
- Le Guillou-Guillemette H, Vallet S, Gaudy-Graffin C et al. Genetic diversity of the hepatitis C virus: impact and issues in the antiviral therapy. World J. Gastroenterol.13(17), 2416–2426 (2007).
- Zein NN. Clinical significance of hepatitis C virus genotypes. Clin. Microbiol. Rev.13(2), 223–235 (2000).
- Scott JD, Gretch DR. Molecular diagnostics of hepatitis C virus infection: a systematic review. JAMA297(7), 724–732 (2007).
- Poynard T, Imbert-Bismut F, Munteanu M et al. Overview of the diagnostic value of biochemical markers of liver fibrosis (FibroTest, HCV FibroSure) and necrosis (ActiTest) in patients with chronic hepatitis C. Comp. Hepatol.3(1), 8 (2004).
- Richter SS. Laboratory assays for diagnosis and management of hepatitis C virus infection. J. Clin. Microbiol.40(12), 4407–4412 (2002).
- Mederacke I, Wedemeyer H, Ciesek S et al. Performance and clinical utility of a novel fully automated quantitative HCV-core antigen assay. J. Clin. Virol.46(3), 210–215 (2009).
- Medhi S, Potukuchi SK, Polipalli SK et al. Diagnostic utility of hepatitis C virus core antigen in hemodialysis patients. Clin. Biochem.41(7–8), 447–452 (2008).
- Scott JD, Gretch DR. Molecular diagnostics of hepatitis C virus infection: a systematic review. JAMA297(7), 724–732 (2007).
- Saldanha J, Heath A, Aberham C et al. World Health Organization collaborative study to establish a replacement WHO international standard for hepatitis C virus RNA nucleic acid amplification technology assays. Vox Sang.88(3), 202–204 (2005).
- Arrojo IP, Pareja MO, Orta MD et al. Detection of a healthy carrier of HCV with no evidence of antibodies for over four years. Transfusion43(7), 953–957 (2003).
- Ratcliff RM, Chang G, Kok T, Sloots TP. Molecular diagnosis of medical viruses. Curr. Issues Mol. Biol.9(2), 87–102 (2007).
- Hill CS. Molecular diagnostic testing for infectious diseases using TMA technology. Expert Rev. Mol. Diagn.1(4), 445–455 (2001).
- Kadam JS, Gonzalez SA, Ahmed F, Menezes A, Jacobson IM. Prognostic significance of hepatitis C virus RNA detection by transcription-mediated amplification with negative polymerase chain reaction during therapy with peginterferon a and ribavirin. Dig. Dis. Sci.52(10), 2525–2530 (2007).
- Morishima C, Morgan TR, Everhart JE et al. Interpretation of positive transcription-mediated amplification test results from polymerase chain reaction-negative samples obtained after treatment of chronic hepatitis C. Hepatology48(5), 1412–1419 (2008).
- Urdea MS, Wuestehube LJ, Laurenson PM, Wilber JC. Hepatitis C – diagnosis and monitoring. Clin. Chem.43(8 Pt 2), 1507–1511 (1997).
- Litt MD, Simpson M, Recillas-Targa F, Prioleau MN, Felsenfeld G. Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci. EMBO J.20(9), 2224–2235 (2001).
- Matsuura K, Tanaka Y, Hasegawa I et al. Abbott RealTime hepatitis C virus (HCV) and Roche Cobas AmpliPrep/Cobas TaqMan HCV assays for prediction of sustained virological response to pegylated interferon and ribavirin in chronic hepatitis C patients. J. Clin. Microbiol.47(2), 385–389 (2009).
- Pyne MT, Konnick EQ, Phansalkar A, Hillyard DR. Evaluation of the Abbott investigational use only RealTime hepatitis C virus (HCV) assay and comparison to the Roche TaqMan HCV analyte-specific reagent assay. J. Clin. Microbiol.47(9), 2872–2878 (2009).
- Wasfy AI, Azzazy HM. Development of a real-time PCR assay for detection and quantification of hepatitis C virus RNA. Clin. Chem.55(6 Suppl.), A151 (2009).
- Nolte FS. Hepatitis C virus genotyping: clinical implications and methods. Mol. Diagn.6(4), 265–277 (2001).
- Halfon P, Trimoulet P, Bourliere M el al. Hepatitis C virus genotyping based on 5´ noncoding sequence analysis (Trugene). J. Clin. Microbiol.39(5), 1771–1773 (2001).
- Podzorski RP. Molecular testing in the diagnosis and management of hepatitis C virus infection. Arch. Pathol. Lab. Med.126(3), 285–290 (2002).
- Ross RS, Viazov SO, Holtzer CD et al. Genotyping of hepatitis C virus isolates using CLIP sequencing. J. Clin. Microbiol.38(10), 3581–3584 (2000).
- Bouchardeau F, Cantaloube JF, Chevaliez S et al. Improvement of hepatitis C virus (HCV) genotype determination with the new version of the INNO-LiPA HCV assay. J. Clin. Microbiol.45(4), 1140–1145 (2007).
- Zekri AR, El-Din HM, Bahnassy AA et al. TRUGENE sequencing versus INNO-LiPA for sub-genotyping of HCV genotype-4. J. Med. Virol.75(3), 412–420 (2005).
- Davidson F, Simmonds P, Ferguson JC et al. Survey of major genotypes and subtypes of hepatitis C virus using RFLP of sequences amplified from the 5´ non-coding region. J. Gen. Virol.76, 1197–1204 (1995).
- Cook L, Sullivan K, Krantz EM, Bagabag A, Jerome KR. Multiplex real-time reverse transcription-PCR assay for determination of hepatitis C virus genotypes. J. Clin. Microbiol.44(11), 4149–4156 (2006).
- Antonishyn NA, Ast VM, McDonald RR et al. Rapid genotyping of hepatitis C virus by primer-specific extension analysis. J. Clin. Microbiol.43(10), 5158–5163 (2005).
- Rho J, Ryu JS, Hur W et al. Hepatitis C virus (HCV) genotyping by annealing reverse transcription-PCR products with genotype-specific capture probes. J. Microbiol.46(1), 81–87 (2008).
- Azzazy HM, Mansour MM, Kazmierczak SC. Nanodiagnostics: a new frontier for clinical laboratory medicine. Clin. Chem.52(7), 1238–1246 (2006).
- Jain KK. Nanodiagnostics: application of nanotechnology in molecular diagnostics. Expert Rev. Mol. Diagn.3(2), 153–161 (2003).
- Jain KK. Nanotechnology in clinical laboratory diagnostics. Clin. Chim. Acta358(1–2), 37–54 (2005).
- Azzazy HM, Mansour MM. In vitro diagnostic prospects of nanoparticles. Clin. Chim. Acta403(1–2), 1–8 (2009).
- Gerion D, Chen F, Kannan B et al. Room-temperature single-nucleotide polymorphism and multiallele DNA detection using fluorescent nanocrystals and microarrays. Anal. Chem.75(18), 4766–4772 (2003).
- Radwan SH, Azzazy HM. Gold nanoparticles for molecular diagnostics. Expert Rev. Mol. Diagn.9(5), 511–524 (2009).
- Baptista P, Pereira E, Eaton P et al. Gold nanoparticles for the development of clinical diagnosis methods. Anal. Bioanal. Chem.391(3), 943–950 (2008).
- Griffin J, Singh AK, Senapati D et al. Size- and distance-dependent nanoparticle surface-energy transfer (NSET) method for selective sensing of hepatitis C virus RNA. Chemistry15(2), 342–351 (2009).
- Glynou K, Ioannou PC, Christopoulos TK, Syriopoulou V. Oligonucleotide-functionalized gold nanoparticles as probes in a dry-reagent strip biosensor for DNA analysis by hybridization. Anal. Chem.75(16), 4155–4160 (2003).
- Wang H, Yang R, Yang L, Tan W. Nucleic acid conjugated nanomaterials for enhanced molecular recognition. ACS Nano3(9), 2451–2460 (2009).
- Gruner G. Carbon nanotube transistors for biosensing applications. Anal. Bioanal. Chem.384(2), 322–335 (2006).
- Wu Y, Phillips JA, Liu H, Yang R, Tan W. Carbon nanotubes protect DNA strands during cellular delivery. ACS Nano2(10), 2023–2028 (2008).
- Dastagir T, Forzani ES, Zhang R et al. Electrical detection of hepatitis C virus RNA on single wall carbon nanotube-field effect transistors. Analyst132(8), 738–740 (2007).
- Hitzler WE, Runkel S. Routine HCV PCR screening of blood donations to identify early HCV infection in blood donors lacking antibodies to HCV. Transfusion41(3), 333–337 (2001).
- Forcic D, Zgorelec R, Kosutic-Gulija T et al. Screening of serologically negative plasma pools for hepatitis C virus by nucleic acid amplification testing in Croatia, 2001–2003. Transfus. Apher. Sci.33(2), 175–179 (2005).
- Stramer SL, Caglioti S, Strong DM. NAT of the United States and Canadian blood supply. Transfusion40(10), 1165–1168 (2000).
- Ghany MG, Strader DB, Thomas DL, Seeff LB. American Association for the Study of Liver Diseases. Diagnosis, management, and treatment of hepatitis C: an update. Hepatology49(4), 1335–1374 (2009).
- McGovern BH, Birch CE, Bowen MJ et al. Improving the diagnosis of acute hepatitis C virus infection with expanded viral load criteria. Clin. Infect. Dis.49(7), 1051–1060 (2009).
- Caruntu FA, Benea L. Acute hepatitis C virus infection: diagnosis, pathogenesis, treatment. J. Gastrointestin. Liver Dis.15(3), 249–256 (2006).
- Pawlotsky JM. Use and interpretation of virological tests for hepatitis C. Hepatology36(5 Suppl. 1), S65–S73 (2002).
- Alberti A, Boccato S, Vario A, Benvegnù L. Therapy of acute hepatitis C. Hepatology36(5 Suppl. 1), S195–S200 (2002).
- Moller JM, Krarup HB. Diagnosis of acute hepatitis C: anti-HCV or HCV-RNA. Scand. J. Gastroenterol.38, 556–558 (2003).
- Fabris P, Fleming VM, Giordani MT, Barnes E. Acute hepatitis C: clinical aspects, diagnosis, and outcome of acute HCV infection. Curr. Pharm. Des.14(17), 1661–1665 (2008).
- Brant LJ, Ramsay ME, Balogun MA et al. Diagnosis of acute hepatitis C virus infection and estimated incidence in low- and high-risk English populations. J. Viral Hepat.15(12), 871–877 (2008).
- Chevaliez S, Pawlotsky JM. Hepatitis C virus serologic and virologic tests and clinical diagnosis of HCV-related liver disease. Int. J. Med. Sci.3(2), 35–40 (2006).
- Carey W. Tests and screening strategies for the diagnosis of hepatitis C. Cleve. Clin. J. Med.70(Suppl.), 7–13 (2003).
- Lasser L, Langlet P. What is the optimal duration of therapy in patients with hepatitis C genotype 2 or 3 infection?: a review. Acta Gastroenterol. Belg.71(3), 298–302 (2008).
- Webster G, Barnes E, Brown D, Dusheiko G. HCV genotypes – role in pathogenesis of disease and response to therapy. Baillieres Best Pract. Res. Clin. Gastroenterol.14(2), 229–240 (2000).
- Ueda T, Chung H, Kudo M et al. Prolonged PEG-IFN and RBV is effective in patients with HCV genotype 1 and high viral load who achieved virological response later than 24 weeks. Intervirology53(1), 55–59 (2010).
- Bochud PY, Cai T, Overbeck K et al. Hepatitis C Cohort Study Group. Genotype 3 is associated with accelerated fibrosis progression in chronic hepatitis C. J. Hepatol.51(4), 655–666 (2009).
- Raimondi S, Bruno S, Mondelli MU, Maisonneuve P. Hepatitis C virus genotype 1b as a risk factor for hepatocellular carcinoma development: a meta-analysis. J. Hepatol.50(6), 1142–1154 (2009).
- Sarrazin C, Teuber G, Kokka R, Rabenau H, Zeuzem S. Detection of residual hepatitis C virus RNA by transcription-mediated amplification in patients with complete virologic response according to polymerase chain reaction-based assays. Hepatology32(4 Pt 1), 818–823 (2000).
- Pawlotsky JM. More sensitive hepatitis C virus RNA detection: what for? J. Hepatol.52(6), 783–785 (2010).
- Idrees M. Development of an improved genotyping assay for the detection of hepatitis C virus genotypes and subtypes in Pakistan. J. Virol. Methods150(1–2), 50–56 (2008).
- Shawky SM, Bald D, Azzazy HM. Direct detection of unamplified hepatitis C virus RNA using unmodified gold nanoparticles. Clin. Biochem.43(13–14), 1163–1168 (2010).
- Glaab WE, Skopek TR. A novel assay for allelic discrimination that combines the fluorogenic 5´ nuclease polymerase chain reaction (TaqMan) and mismatch amplification mutation assay. Mutat. Res.30(1), 1–12 (1999).
- Seden K, Back D, Khoo S. New directly acting antivirals for hepatitis C: potential for interaction with antiretrovirals. J. Antimicrob. Chemother.65(6), 1079–1085 (2010).
- Mao X, Ma Y, Zhang A, Zhang L, Zeng L, Liu G. Disposable nucleic acid biosensors based on gold nanoparticle probes and lateral flow strip. Anal. Chem.81(4), 1660–1668 (2009).
Websites
- WHO. Hepatitis C fact sheet number 164 www.who.int/mediacentre/factsheets/fs164/en
- US FDA www.fda.gov
- Gen-Probe www.gen-probe.com