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BioTechniques Volume 37, 2004 - Issue 1
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Drug Discovery and Genomic Technologies

Assessment of multiple displacement amplification in molecular epidemiology

Jin Yan1 City of Hope National Medical Center, Duarte, CA
,
Jinong Feng1 City of Hope National Medical Center, Duarte, CA
,
Seiyu Hosono2 Molecular Staging, New Haven, CT, USA
&
Steve S. Sommer1 City of Hope National Medical Center, Duarte, CACorrespondence[email protected]
Pages 136-143 | Received 21 Oct 2003, Accepted 22 Mar 2004, Published online: 06 Jun 2018

References

  • Cheung, V.G. and S.F.Nelson. 1996. Whole genome amplification using a degenerate oligonucleotide primer allows hundreds of genotypes to be performed on less than one nanogram of genomic DNA. Proc. Natl. Acad. Sci. USA93:14676–14679.
  • Paunio, T., I.Reima, and A.C.Syvanen. 1996. Preimplantation diagnosis by whole-genome amplification, PCR amplification, and solid-phase minisequencing of blastomere DNA. Clin. Chem.42:1382–1390.
  • Telenius, H., N.P.Carter, C.E.Bebb, M.Nordenskjold, B.A.Ponder, and A.Tunnacliffe. 1992. Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer. Genomics13:718–725.
  • Zhang, L., X.Cui, K.Schmitt, R.Hubert, W.Navidi, and N.Arnheim. 1992. Whole genome amplification from a single cell: implications for genetic analysis. Proc. Natl. Acad. Sci. USA89:5847–5851.
  • Dean, F.B., S.Hosono, L.Fang, X.Wu, A.F.Faruqi, P.Bray-Ward, Z.Sun, Q.Zong, et al.. 2002. Comprehensive human genome amplification using multiple displacement amplification. Proc. Natl. Acad. Sci. USA99:5261–5266.
  • Hosono, S., A.F.Faruqi, F.B.Dean, Y.Du, Z.Sun, X.Wu, J.Du, S.F.Kingsmore, et al.. 2003. Unbiased whole-genome amplification directly from clinical samples. Genome Res.13:954–964.
  • Tranah, G.J., P.J.Lescault, D.J.Hunter, and I.De Vivo. 2003. Multiple displacement amplification prior to single nucleotide polymorphism genotyping in epidemiologic studies. Biotechnol. Lett.25:1031–1036.
  • Gustafson, S., J.A.Proper, E.J.Bowie, and S.S.Sommer. 1987. Parameters affecting the yield of DNA from human blood. Anal. Biochem.165:294–299.
  • Ahn, S.J., J.Costa, and J.R.Emanuel. 1996. PicoGreen quantitation of DNA: effective evaluation of samples pre- or post-PCR. Nucleic Acids Res.24:2623–2625.
  • Singer, V.L., L.J.Jones, S.T.Yue, and R.P.Haugland. 1997. Characterization of PicoGreen reagent and development of a fluorescence-based solution assay for double-stranded DNA quantitation. Anal. Biochem.249:228–238.
  • Liu, Q., J.Feng, C.Buzin, C.Wen, G.Nozari, A.Mengos, V.Nguyen, J.Liu, et al.. 1999. Detection of virtually all mutations-SSCP (DOVAM-S): a rapid method for mutation scanning with virtually 100% sensitivity. BioTechniques26:932–942.
  • Liu, Q. and S.S.Sommer. 1998. Subcycling-PCR for multiplex long-distance amplification of regions with high and low GC content: application to the inversion hotspot in the factor VIII gene. BioTechniques25:1022–1028.
  • Boland, C.R., S.N.Thibodeau, S.R.Hamilton, D.Sidransky, J.R.Eshleman, R.W.Burt, S.J.Meltzer, M.A.Rodriguez-Bigas, et al.. 1998. A National Cancer Institute Workshop on Microsatellite Instability for cancer detection and familial predisposition: development of international criteria for the determination of microsatellite instability in colorectal cancer. Cancer Res.58:5248–5257.
  • Ewing, B., L.Hillier, M.C.Wendl, and P.Green. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res.8:175–185.
  • Liu, Q., G.Nozari, and S.S.Sommer. 1998. Single-tube polymerase chain reaction for rapid diagnosis of the inversion hotspot of mutation in hemophilia A. Blood92:1458–1459.
  • Detter, J.C., J.M.Jett, S.M.Lucas, E.Dalin, A.R.Arellano, M.Wang, J.R.Nelson, J.Chapman, et al.. 2002. Isothermal strand-displacement amplification applications for high-throughput genomics. Genomics80:691–698.
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