Advanced search
Publication Cover
Clinical, Cosmetic and Investigational Dermatology Volume 15, 2022 - Issue
Submit an article Journal homepage
135
Views
0
CrossRef citations to date
0
Altmetric
Original Research

Comparison of Epidermal Gene Expression Profiles in Mice Aged 1 to 20 Months

Xiaohua Wang1 Department of Dermatology, Jinan University, Guangzhou City, Guangdong Province, People’s Republic of China;2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of China
,
Si Wen2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of China
,
Li Ye2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of China
,
Dan Liu2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of China
,
Mao-Qiang Man2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of ChinaORCID Iconhttps://orcid.org/0000-0002-0957-4903
ORCID Icon &
Bin Yang1 Department of Dermatology, Jinan University, Guangzhou City, Guangdong Province, People’s Republic of China;2 The Dermatology Hospital, Southern Medical University, Guangdong, 510091, People’s Republic of ChinaCorrespondence[email protected]
Pages 69-76 | Published online: 16 Jan 2022

References

  • Wang Z, Man MQ, Li T, Elias PM, Mauro TM. Aging-associated alterations in epidermal function and their clinical significance. Aging. 2020;12(6):5551–5565. doi:10.18632/aging.102946
  • Ishii MA, Miyachi KJ, Cheng B, Sun BK. Aging-associated decline of epidermal PSMD8 contributes to impaired skin function. J Invest Dermatol. 2018;138(4):976–978. doi:10.1016/j.jid.2017.10.034
  • Rinnerthaler M, Streubel MK, Bischof J, Richter K. Skin aging, gene expression and calcium. Exp Gerontol. 2015;68:59–65. doi:10.1016/j.exger.2014.09.015
  • Man MQ, Xin SJ, Song SP, et al. Variation of skin surface pH, sebum content and stratum corneum hydration with age and gender in a large Chinese population. Skin Pharmacol Physiol. 2009;22(4):190–199. doi:10.1159/000231524
  • Age Converter. Mouse age calculator. Available from: http://www.age-converter.com/mouse-age-calculator.html. Accessed December 21, 2021.
  • Mao-Qiang M, Elias PM, Feingold KR. Fatty acids are required for epidermal permeability barrier function. J Clin Invest. 1993;92(2):791–798. doi:10.1172/JCI116652
  • Li R, Li Y, Kristiansen K, Wang J. SOAP: short oligonucleotide alignment program. Bioinformatics. 2008;24(5):713–714. doi:10.1093/bioinformatics/btn025
  • Kim D, Langmead B, Salzberg SL. HISAT: a fast spliced aligner with low memory requirements. Nat Methods. 2015;12(4):357–360. doi:10.1038/nmeth.3317
  • Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods. 2012;9(4):357–359. doi:10.1038/nmeth.1923
  • Li B, Dewey CN. RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinform. 2011;12:323. doi:10.1186/1471-2105-12-323
  • Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(2):550. doi:10.1186/s13059-014-0550-8
  • Kanehisa M, Araki M, Goto S, et al. KEGG for linking genomes to life and the environment. Nucleic Acids Res. 2008;36(Databaseissue):D480–4. doi:10.1093/nar/gkm882
  • Ashburner M, Ball CA, Blake JA, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet. 2000;25(1):25–29. doi:10.1038/75556
  • Zhong S, Xie D. Gene Ontology analysis in multiple gene clusters under multiple hypothesis testing framework. Artif Intell Med. 2007;41(2):105–115. doi:10.1016/j.artmed.2007.08.002
  • Abdi H. Bonferroni and Šidák corrections for multiple comparisons. Encycl Meas Stat. 2007;3:103–107.
  • Kumar L, Futschik ME. Mfuzz: a software package for soft clustering of microarray data. Bioinformation. 2007;2(1):5–7. doi:10.6026/97320630002005
  • Hu LZ, Mauro TM, Dang E, et al. Epidermal dysfunction leads to an age-associated increase in levels of serum inflammatory cytokines. J Invest Dermatol. 2017;137(6):1277–1285. doi:10.1016/j.jid.2017.01.007
  • Gerstein AD, Phillips TJ, Rogers GS, Gilchrest BA. Wound healing and aging. Dermatol Clin. 1993;11(4):749–757. doi:10.1016/S0733-8635(18)30227-4
  • Glass D, Viñuela A, Davies MN, et al. Gene expression changes with age in skin, adipose tissue, blood and brain. Genome Biol. 2013;14(7):R75. doi:10.1186/gb-2013-14-7-r75
  • Viñuela A, Brown AA, Buil A, et al. Age-dependent changes in mean and variance of gene expression across tissues in a twin cohort. Hum Mol Genet. 2018;27(4):732–741. doi:10.1093/hmg/ddx424
  • Choi EH, Man MQ, Xu P, et al. Stratum corneum acidification is impaired in moderately aged human and murine skin. J Invest Dermatol. 2007;127(12):2847–2856. doi:10.1038/sj.jid.5700913

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.