Differences in clinical characteristics and mutational pattern between synchronous and metachronous colorectal liver metastases

References

• TorreLABrayFSiegelRLFerlayJLortet-TieulentJJemalAGlobal cancer statistics, 2012CA Cancer J Clin20156528710825651787
   PubMed Web of Science ®Google Scholar
• van der WalGEGouwASKampsJAAngiogenesis in synchronous and metachronous colorectal liver metastases: the liver as a permissive soilAnn Surg20122551869422156924
   PubMed Web of Science ®Google Scholar
• Van CutsemENordlingerBAdamREuropean Colorectal Metastases Treatment GroupTowards a pan-European consensus on the treatment of patients with colorectal liver metastasesEur J Cancer200642142212222116904315
   PubMed Web of Science ®Google Scholar
• de JongMCPulitanoCRiberoDRates and patterns of recurrence following curative intent surgery for colorectal liver metastasis: an international multi-institutional analysis of 1669 patientsAnn Surg2009250344044819730175
   PubMed Web of Science ®Google Scholar
• TsaiMSSuYHHoMCClinicopathological features and prognosis in resectable synchronous and metachronous colorectal liver metastasisAnn Surg Oncol200714278679417103254
   PubMed Web of Science ®Google Scholar
• DexiangZLiRYeWOutcome of patients with colorectal liver metastasis: analysis of 1,613 consecutive casesAnn Surg Oncol20121992860286822526903
   PubMed Web of Science ®Google Scholar
• WatanabeTKobunaiTYamamotoYPrediction of liver metastasis after colorectal cancer using reverse transcription-polymerase chain reaction analysis of 10 genesEur J Cancer201046112119212620570135
   PubMed Web of Science ®Google Scholar
• PantaleoMAAstolfiANanniniMGene expression profiling of liver metastases from colorectal cancer as potential basis for treatment choiceBr J Cancer200899101729173418827815
   PubMed Web of Science ®Google Scholar
• ChenJLiQWangCWuJZhaoGPrognostic significance of c-erbB-2 and vascular endothelial growth factor in colorectal liver metastasesAnn Surg Oncol20101761555156320069460
   PubMed Web of Science ®Google Scholar
• NanashimaAShibataKNakayamaTClinical significance of microvessel count in patients with metastatic liver cancer originating from colorectal carcinomaAnn Surg Oncol20091682130213719495885
   PubMed Web of Science ®Google Scholar
• SlesserAAGeorgiouPBrownGMudanSGoldinRTekkisPThe tumour biology of synchronous and metachronous colorectal liver metastases: a systematic reviewClin Exp Metastasis201330445747023180209
   PubMed Web of Science ®Google Scholar
• YuJWuWKLiXNovel recurrently mutated genes and a prognostic mutation signature in colorectal cancerGut201564463664524951259
   PubMed Web of Science ®Google Scholar
• HelmanELawrenceMSStewartCSougnezCGetzGMeyersonMSomatic retrotransposition in human cancer revealed by whole-genome and exome sequencingGenome Res20142471053106324823667
   PubMed Web of Science ®Google Scholar
• SadanandamALyssiotisCAHomicskoKA colorectal cancer classification system that associates cellular phenotype and responses to therapyNat Med201319561962523584089
   PubMed Web of Science ®Google Scholar
• The SeattleSeq Annotation server Available from: http://snp.gs.washington.edu/SeattleSeqAnnotation138/Accessed September, 2014
   Google Scholar
• NHLBI Exome Sequencing Project: Exome Variant Server Available from: http://evs.gs.washington.edu/EVS/Accessed September, 2014
   Google Scholar
• dbSNP databases Available from: http://www.ncbi.nlm.nih.gov/projects/SNP/Accessed September, 2014
   Google Scholar
• KumarPHenikoffSNgPCPredicting the effects of coding non-synonymous variants on protein function using the SIFT algorithmNat Protoc2009471073108119561590
   PubMed Web of Science ®Google Scholar
• SIFT database Available from: http://www.jcvi.org/Accessed September, 2014
   Google Scholar
• AdzhubeiIJordanDMSunyaevSRPredicting functional effect of human missense mutations using PolyPhen-2Curr Protoc Hum Genet2013 Chapter 7: Unit 7.20
   PubMedGoogle Scholar
• PolyPhen-2 (Polymorphism Phenotyping v2) Available from: http://genetics.bwh.harvard.edu/pph2/Accessed September, 2014
   Google Scholar
• RevaBAntipinYSanderCPredicting the functional impact of protein mutations: application to cancer genomicsNucleic Acids Res20113917e11821727090
   PubMed Web of Science ®Google Scholar
• Mutationassessor.org (release 3). Available from: http://mutationas-sessor.org/r3/Accessed September, 2014
   Google Scholar
• Gonzalez-PerezALopez-BigasNImproving the assessment of the outcome of nonsynonymous SNVs with a consensus deleteriousness score, CondelAm J Hum Genet201188444044921457909
   PubMed Web of Science ®Google Scholar
• FannsDB database: Condel Available from: http://bbglab.irbbarcelona.org/fannsdb/Accessed September, 2014
   Google Scholar
• ShihabHAGoughJCooperDNPredicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov modelsHum Mutat2013341576523033316
   PubMed Web of Science ®Google Scholar
• Fathmm (Functional Analysis through Hidden Markov Models v2.3) Available from: http://fathmm.biocompute.org.uk/Accessed September, 2014
   Google Scholar
• Gonzalez-PerezADeu-PonsJLopez-BigasNImproving the prediction of the functional impact of cancer mutations by baseline tolerance transformationGenome Med20124118923181723
   PubMedGoogle Scholar
• GeneRIF (Gene Reference Into Function) Available from: http://www.ncbi.nlm.nih.gov/gene/submit-generifAccessed November, 2014
   Google Scholar
• COSMIC (Catalog of Somatic Mutations in Cancer) Available from: https://cancer.sanger.ac.uk/cosmicAccessed November, 2014
   Google Scholar
• Comprehensive molecular characterization of human colon and rectal cancerNature2012487740733033722810696
   PubMed Web of Science ®Google Scholar
• KimTMJungSHAnCHSubclonal genomic architectures of primary and metastatic colorectal cancer based on intratumoral genetic heterogeneityClin Cancer Res201521194461447225979483
   PubMed Web of Science ®Google Scholar
• KuramochiHNakajimaGKanekoYAmphiregulin and epiregulin mRNA expression in primary colorectal cancer and corresponding liver metastasesBMC Cancer2012128822409860
   PubMed Web of Science ®Google Scholar
• NakamotoRHUetakeHIidaSCorrelations between cyclooxygenase-2 expression and angiogenic factors in primary tumors and liver metastases in colorectal cancerJpn J Clin Oncol200737967968517846040
   PubMed Web of Science ®Google Scholar
• KimKPKimJEHongYSPaired primary and metastatic tumor analysis of somatic mutations in synchronous and metachronous colorectal cancerCancer Res Treat201749116116727384156
   PubMed Web of Science ®Google Scholar
• BirdNCMangnallDMajeedAWBiology of colorectal liver metastases: a reviewJ Surg Oncol2006941688016788948
   PubMed Web of Science ®Google Scholar