Search in:

Advanced search

Cancer Management and Research Volume 10, 2018 - Issue

Submit an article Journal homepage

Open access

Views

CrossRef citations to date

Altmetric

Original Research

A 15-lncRNA signature predicts survival and functions as a ceRNA in patients with colorectal cancer

Xuning Wang1 Department of General Surgery, Chinese PLA Medical School, Beijing 100853, People’s Republic of China

Jianguo Zhou2 Division of Thoracic Oncology, Department of Oncology, Affiliated Hospital of Zunyi Medical University, Zunyi City 563000, Guizhou Province, People’s Republic of China

Maolin Xu1 Department of General Surgery, Chinese PLA Medical School, Beijing 100853, People’s Republic of China

Yongfeng Yan3 Department of General Surgery, Chinese PLA General Hospital, Beijing 100853, People’s Republic of China, [email protected]

Liang Huang1 Department of General Surgery, Chinese PLA Medical School, Beijing 100853, People’s Republic of China

Yanshen Kuang1 Department of General Surgery, Chinese PLA Medical School, Beijing 100853, People’s Republic of China

Yuansheng Liu4 School of Medicine, Nankai University, TianJing, People’s Republic of China

Peng Li3 Department of General Surgery, Chinese PLA General Hospital, Beijing 100853, People’s Republic of China, [email protected]

Wei Zheng3 Department of General Surgery, Chinese PLA General Hospital, Beijing 100853, People’s Republic of China, [email protected]

Hongyi Liu3 Department of General Surgery, Chinese PLA General Hospital, Beijing 100853, People’s Republic of China, [email protected]

Baoqing Jia3 Department of General Surgery, Chinese PLA General Hospital, Beijing 100853, People’s Republic of China, [email protected]Correspondence[email protected]

show all

Pages 5799-5806 | Published online: 16 Nov 2018

Cite this article
CrossMark

Full Article
Figures & data
References
Citations
Metrics
Licensing
Reprints & Permissions
View PDF PDF

References

BrennerHKloorMPoxCPColorectal cancerLancet201438399271490150224225001
PubMed Web of Science ®Google Scholar
Cancer Genome Atlas NetworkComprehensive molecular characterization of human colon and rectal cancerNature2012487740733033722810696
PubMed Web of Science ®Google Scholar
WoodLDParsonsDWJonesSThe genomic landscapes of human breast and colorectal cancersScience200731858531108111317932254
PubMed Web of Science ®Google Scholar
BatistaPJChangHYLong noncoding RNAs: cellular address codes in development and diseaseCell201315261298130723498938
PubMed Web of Science ®Google Scholar
BeermannJPiccoliMTViereckJThumTNon-coding RNAs in development and disease: background, mechanisms, and therapeutic approachesPhysiol Rev20169641297132527535639
PubMed Web of Science ®Google Scholar
LiangWCFuWMWongCWThe lncRNA H19 promotes epithelial to mesenchymal transition by functioning as miRNA sponges in colorectal cancerOncotarget2015626225132252526068968
PubMedGoogle Scholar
SalmenaLPolisenoLTayYKatsLPandolfiPPA ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?Cell2011146335335821802130
PubMed Web of Science ®Google Scholar
AkenBLAylingSBarrellDThe Ensembl gene annotation systemDatabase20162016baw09327337980
PubMedGoogle Scholar
RobinsonMDMccarthyDJSmythGKedgeR: a Bioconductor package for differential expression analysis of digital gene expression dataBioinformatics201026113914019910308
PubMed Web of Science ®Google Scholar
MccarthyDJChenYSmythGKDifferential expression analysis of multifactor RNA-Seq experiments with respect to biological variationNucleic Acids Res201240104288429722287627
PubMed Web of Science ®Google Scholar
ChoHJYuAKimSKangJRobust likelihood-based survival modeling with microarray dataJ Stat Software2008291116
Web of Science ®Google Scholar
TherneauTMA Package for Survival Analysis in S. version 238201538 Available from: https://CRAN.R-project.org/package=survivalAccessed October 29, 2018
Google Scholar
TherneauTMGrambschPMModeling survival data: extending the Cox modelTechnometrics20004418586
Google Scholar
HeagertyPJLumleyTPepeMSTime-dependent ROC curves for censored survival data and a diagnostic markerBiometrics200056233734410877287
PubMed Web of Science ®Google Scholar
WickhamHggplot2: Elegant Graphics for Data AnalysisNew York, NYSpringer Publishing Company Incorporated2009
Google Scholar
TangYHorikoshiMLiWGgfortify: Unified interface to visualize statistical results of popular r packages2016 Available from: https://journal.r-project.org/archive/2016/RJ-2016-060/RJ-2016-060.pdfAccessed October 16, 2018
Google Scholar
YuanTGgfortify: Data Visualization Tools for Statistical Analysis Results2017 Available from: https://rdrr.io/cran/ggfortify/Accessed October 16, 2018
Google Scholar
ZerbinoDRAchuthanPAkanniWEnsembl 2018Nucleic Acids Res201846D1D754D76129155950
PubMed Web of Science ®Google Scholar
WangXImproving microRNA target prediction by modeling with unambiguously identified microRNA-target pairs from CLIP-ligation studiesBioinformatics20163291316132226743510
PubMed Web of Science ®Google Scholar
WongNWangXmiRDB: an online resource for microRNA target prediction and functional annotationsNucleic Acids Res201543D1D146D15225378301
PubMed Web of Science ®Google Scholar
ChouCHChangNWShresthaSmiRTarBase 2016: updates to the experimentally validated miRNA-target interactions databaseNucleic Acids Res201644D1D239D24726590260
PubMed Web of Science ®Google Scholar
AgarwalVBellGWNamJWBartelDPPredicting effective microRNA target sites in mammalian mRNAsElife20154
Web of Science ®Google Scholar
ShannonPMarkielAOzierOCytoscape: a software environment for integrated models of biomolecular interaction networksGenome Res200313112498250414597658
PubMed Web of Science ®Google Scholar
YuGWangLGHanYHeQYQyHclusterProfiler: an R package for comparing biological themes among gene clustersOMICS201216528428722455463
PubMed Web of Science ®Google Scholar
SchmittAMChangHYLong noncoding RNAs in cancer pathwaysCancer Cell201629445246327070700
PubMed Web of Science ®Google Scholar
LuCYangMLuoFPrediction of lncRNA-disease associations based on inductive matrix completionBioinformatics201834193357336429718113
PubMed Web of Science ®Google Scholar
WangZYangBZhangMlncRNA epigenetic landscape analysis identifies EPIC1 as an oncogenic lncRNA that interacts with MYC and promotes cell-cycle progression in cancerCancer Cell201833470672029622465
PubMed Web of Science ®Google Scholar
SongYXSunJXZhaoJHNon-coding RNAs participate in the regulatory network of CLDN4 via ceRNA mediated miRNA evasionNat Commun20178128928819095
PubMed Web of Science ®Google Scholar
BergerACKorkutAKanchiRSA comprehensive pan-cancer molecular study of gynecologic and breast cancersCancer Cell201833469070529622464
PubMed Web of Science ®Google Scholar
LiMJZhangJLiangQExploring genetic associations with ceRNA regulation in the human genomeNucleic Acids Res201745105653566528472449
PubMed Web of Science ®Google Scholar
KarrethFAPandolfiPPceRNA cross-talk in cancer: when ce-bling rivalries go awryCancer Discov20133101113112124072616
PubMed Web of Science ®Google Scholar
CarethersJMJungBHGenetics and genetic biomarkers in sporadic colorectal cancerGastroenterology2015149511771190.e117326216840
PubMed Web of Science ®Google Scholar
BykovVJNErikssonSEBianchiJWimanKGTargeting mutant p53 for efficient cancer therapyNat Rev Cancer20181828910229242642
PubMed Web of Science ®Google Scholar
KastenhuberERLoweSWPutting p53 in contextCell201717061062107828886379
PubMed Web of Science ®Google Scholar
Zucman-RossiJVillanuevaANaultJCLlovetJMGenetic landscape and biomarkers of hepatocellular carcinomaGastroenterology2015149512261239.e426099527
PubMed Web of Science ®Google Scholar

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.

People also read
Recommended articles
Cited by

To cite this article:

Reference style: APA Chicago Harvard

Citation copied to clipboard

Reference styles above use APA (6th edition), Chicago (16th edition) & Harvard (10th edition)

Download citation

Download a citation file in RIS format that can be imported by citation management software including EndNote, ProCite, RefWorks and Reference Manager.

Choose format: RIS BibTex RefWorks Direct Export

Choose options: Citation Citation & abstract Citation & references

A 15-lncRNA signature predicts survival and functions as a ceRNA in patients with colorectal cancer

References

Information for

Open access

Opportunities

Help and information

Your download is now in progress and you may close this window

Login or register to access this feature

A 15-lncRNA signature predicts survival and functions as a ceRNA in patients with colorectal cancer

References

Related research

To cite this article:

Download citation

Information for

Open access

Opportunities

Help and information

Keep up to date