Characterization of antibiotic-susceptibility patterns and virulence genes of five major sequence types of Escherichia coli isolates cultured from extraintestinal specimens: a 1-year surveillance study from Iran

References

• JohnsonJRRussoTAExtraintestinal pathogenic Escherichia coli: “the other bad E coli”J Lab Clin Med2002139315516211944026
   PubMed Web of Science ®Google Scholar
• RussoTAJohnsonJRProposal for a new inclusive designation for extraintestinal pathogenic isolates of Escherichia coli: ExPECJ Infect Dis200018151753175410823778
   PubMed Web of Science ®Google Scholar
• FoxmanBBrownPEpidemiology of urinary tract infections: transmission and risk factors, incidence, and costsInfect Dis Clin North Am200317222724112848468
   PubMed Web of Science ®Google Scholar
• Nicolas-ChanoineMHBlancoJLeflon-GuiboutVIntercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15J Antimicrob Chemother2008612273281518077311
   PubMed Web of Science ®Google Scholar
• CoqueTMNovaisÂCarattoliADissemination of clonally related Escherichia coli strains expressing extended-spectrum beta-lactamase CTX-M-15Emerg Infect Dis200814219520018258110
   PubMed Web of Science ®Google Scholar
• Adams-SapperSDiepBAPerdreau-RemingtonFRileyLWClonal composition and community clustering of drug-susceptible and -resistant Escherichia coli isolates from bloodstream infectionsAntimicrob Agents Chemother201357149049723147723
   PubMed Web of Science ®Google Scholar
• BanerjeeRJohnstonBLohseCThe clonal distribution and diversity of extraintestinal Escherichia coli isolates vary according to patient characteristicsAntimicrob. Agents Chemother201357125912591724041881
   PubMed Web of Science ®Google Scholar
• JaureguyFLandraudLPassetVPhylogenetic and genomic diversity of human bacteremic Escherichia coli strainsBMC Genomics20089156019036134
   PubMed Web of Science ®Google Scholar
• TartofSYSolbergODMangesARRileyLWAnalysis of a uropathogenic Escherichia coli clonal group by multilocus sequence typingJ Clin Microbiol200543125860586416333067
   PubMed Web of Science ®Google Scholar
• DoumithMDayMCiesielczukHrapid identification of major Escherichia coli sequence types causing urinary tract and bloodstream infectionsJ Clin Microbiol201553116016625355761
   PubMed Web of Science ®Google Scholar
• GhotaslouRAghazadehMAhangarzadeh RezaeeMMoshafiMHForootanfarHHojabriZThe prevalence of aminoglycoside-modifying enzymes among coagulase negative staphylococci in Iranian pediatric patientsJ Infect Chemother20142056957325023717
   PubMed Web of Science ®Google Scholar
• ClermontOChristensonJKDenamurEGordonDMThe Clermont Escherichia coli phylo-typing method revisited: improvement of specificity and detection of new phylo-groupsEnviron Microbiol Rep201351586523757131
   PubMed Web of Science ®Google Scholar
• HojabriZMirmohammadkhaniMKamaliFMolecular epidemiology of Escherichia coli sequence type 131 and its H30/H30-Rx subclones recovered from extra-intestinal infections: first report of OXA-48 producing ST131 clone from IranEur J Clin Microbiol Infect Dis201736101859186628550370
   PubMed Web of Science ®Google Scholar
• Clinical and Laboratory Standards InstitutePerformance Standards for Antimicrobial Susceptibility Testing; Twentieth Informational Supplement M100-S23 Wayne, PA 19087USACLSI2013
   Google Scholar
• JohnsonJRPorterSThurasPCastanheiraMThe pandemic H 30 sub-clone of sequence type 131 (ST131) as the leading cause of multidrug-resistant Escherichia coli infections in the United States (2011–2012)Open Forum Infect Dis201742ofx08928638846
   PubMed Web of Science ®Google Scholar
• HaldorsenBCSimonsenGSSundsfjordASamuelsenONorwegian Study Group on Aminoglycoside ResistanceIncreased prevalence of aminoglycoside resistance in clinical isolates of Escherichia coli and Klebsiella spp. in Norway is associated with the acquisition of AAC(3)-II and AAC(6′)-IbDiagn Microbiol Infect Dis2014781666924231381
   PubMed Web of Science ®Google Scholar
• Nüesch-InderbinenMTBascheraMZurfluhKClonal diversity, virulence potential and antimicrobial resistance of Escherichia coli causing community acquired urinary tract infection in SwitzerlandFront Microbiol2017182334
   Web of Science ®Google Scholar
• JohnsonJRJohnstonBClabotsCKuskowskiMACastanheiraMEscherichia coli sequence type ST131 as the major cause of serious multidrug-resistant E. coli infections in the United StatesClin Infect Dis201051328629420572763
   PubMed Web of Science ®Google Scholar
• GibreelTMDodgsonARCheesbroughJPopulation structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from Northwest EnglandJ Antimicrob Chemother201267234635622028202
   PubMed Web of Science ®Google Scholar
• de Souza da-SilvaAPde SousaVSMartinsNEscherichia coli sequence type 73 as a cause of community acquired urinary tract infection in men and women in Rio de Janeiro, BrazilDiagn Microbiol Infect Dis2017881697428214224
   PubMed Web of Science ®Google Scholar
• MangesARHarelJMassonLMultilocus sequence typing and virulence gene profiles associated with Escherichia coli from human and animal sourcesFoodborne Pathog Dis201512430231025774654
   PubMed Web of Science ®Google Scholar
• MoraALópezCDabhiGExtraintestinal pathogenic Escherichia coli O1:K1:H7/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distributionBMC Microbiol20099113219583828
   PubMed Web of Science ®Google Scholar
• VincentCBoerlinPDaignaultDFood reservoir for Escherichia coli causing urinary tract infectionsEmerg Infect Dis2010161889520031048
   PubMed Web of Science ®Google Scholar
• JohnsonTJWannemuehlerYJohnsonSJComparison of extraintestinal pathogenic Escherichia coli strains from human and avian sources reveals a mixed subset representing potential zoonotic pathogensAppl Environ Microbiol200874227043705018820066
   PubMed Web of Science ®Google Scholar
• JohnsonTJWannemuehlerYDoetkottCIdentification of minimal predictors of avian pathogenic Escherichia coli virulence for use as a rapid diagnostic toolJ Clin Microbiol200846123987399618842938
   PubMed Web of Science ®Google Scholar
• BrzuszkiewiczEBrüggemannHLiesegangHHow to become a uropathogen: Comparative genomic analysis of extraintestinal pathogenic Escherichia coli strainsProc Natl Acad Sci USA200610334128791288416912116
   PubMed Web of Science ®Google Scholar
• CoelhoAMoraAMamaniRSpread of Escherichia coli O25b:H4-B2-ST131 producing CTX-M-15 and SHV-12 with high virulence gene content in Barcelona (Spain)J Antimicrob Chemother201166351752621177675
   PubMed Web of Science ®Google Scholar
• CroxallGHaleJWestonVMolecular epidemiology of extraintestinal pathogenic Escherichia coli isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settingsJ Antimicrob Chemother201166112501250821862477
   PubMed Web of Science ®Google Scholar