Coexistence of bla_NDM-1 and rmtC on a Transferrable Plasmid of a Novel ST192 Klebsiella aerogenes Clinical Isolate

References

• Chen Z, Li H, Feng J, et al. NDM-1 encoded by a pNDM-BJ01-like plasmid p3SP-NDM in clinical Enterobacter aerogenes. Front Microbiol. 2015;6:294. doi:10.3389/fmicb.2015.0029425926823
   PubMed Web of Science ®Google Scholar
• Georghiou PR, Hamill RJ, Wright CE, et al. Molecular epidemiology of infections due to Enterobacter aerogenes: identification of hospital outbreak-associated strains by molecular techniques. Clin Infect Dis. 1995;20(1):84–94. doi:10.1093/clinids/20.1.847727676
   PubMed Web of Science ®Google Scholar
• Davin-Regli A, Saux P, Bollet C, Gouin F, De Micco P. Investigation of outbreaks of Enterobacter aerogenes colonisation and infection in intensive care units by random amplification of polymorphic DNA. J Med Microbiol. 1996;44(2):89–98. doi:10.1099/00222615-44-2-898642581
   PubMed Web of Science ®Google Scholar
• De Gheldre Y, Maes N, Rost F, et al. Molecular epidemiology of an outbreak of multidrug-resistant Enterobacter aerogenes infections and in vivo emergence of imipenem resistance. J Clin Microbiol. 1997;35(1):152–160.8968898
   PubMed Web of Science ®Google Scholar
• Jalaluddin S, Devaster JM, Scheen R, Gerard M, Butzler JP. Molecular epidemiological study of nosocomial Enterobacter aerogenes isolates in a Belgian hospital. J Clin Microbiol. 1998;36(7):1846–1852.9650923
   PubMed Web of Science ®Google Scholar
• Ronveaux O, Gheldre Y, Glupczynski Y, Struelens M, Mol P. Emergence of Enterobacter aerogenes as a major antibiotic-resistant nosocomial pathogen in Belgian hospitals. Clin Microbiol Infect. 1999;5(10):622–627. doi:10.1111/j.1469-0691.1999.tb00419.x11851693
   PubMedGoogle Scholar
• Chevalier J, Mulfinger C, Garnotel E, Nicolas P, Davin-Regli A, Pages JM. Identification and evolution of drug efflux pump in clinical Enterobacter aerogenes strains isolated in 1995 and 2003. PLoS ONE. 2008;3(9):e3203. doi:10.1371/journal.pone.000320318787654
   PubMed Web of Science ®Google Scholar
• Sheu CC, Chang YT, Lin SY, Chen YH, Hsueh PR. Infections caused by carbapenem-resistant enterobacteriaceae: an update on therapeutic options. Front Microbiol. 2019;10:80. doi:10.3389/fmicb.2019.0008030761114
   PubMed Web of Science ®Google Scholar
• Yong D, Toleman MA, Giske CG, et al. Characterization of a new metallo-beta-lactamase gene, bla(NDM-1), and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Chemother. 2009;53(12):5046–5054. doi:10.1128/AAC.00774-0919770275
   PubMed Web of Science ®Google Scholar
• Tafaj S, Gona F, Kapisyzi P, et al. Isolation of the first New Delhi metallo-ss-lactamase-1 (NDM-1)-producing and colistin-resistant Klebsiella pneumoniae sequence type ST15 from a digestive carrier in Albania, May 2018. J Global Antimicrob Resist. 2019;17:142–144. doi:10.1016/j.jgar.2018.12.002
   Web of Science ®Google Scholar
• Nordmann P, Poirel L, Walsh TR, Livermore DM. The emerging NDM carbapenemases. Trends Microbiol. 2011;19(12):588–595. doi:10.1016/j.tim.2011.09.00522078325
   PubMed Web of Science ®Google Scholar
• Hidalgo L, Hopkins KL, Gutierrez B, et al. Association of the novel aminoglycoside resistance determinant RmtF with NDM carbapenemase in Enterobacteriaceae isolated in India and the UK. J Antimicrob Chemother. 2013;68(7):1543–1550. doi:10.1093/jac/dkt07823580560
   PubMed Web of Science ®Google Scholar
• CLSI. 2018CLSI.Performance Standards for Antimicrobial Susceptibility Testing. 28th ed. CLSI supplement M100 Wayne, PA: Clinical and Laboratory Standard Institute; 2018 320.
   Google Scholar
• Queenan AM, Bush K. Carbapenemases: the versatile beta-lactamases. Clin Microbiol Rev. 2007;20(3):440–458. doi:10.1128/CMR.00001-0717630334
   PubMed Web of Science ®Google Scholar
• Nordmann P, Poirel L, Carrer A, Toleman MA, Walsh TR. How to detect NDM-1 producers. J Clin Microbiol. 2011;49(2):718–721. doi:10.1128/JCM.01773-1021123531
   PubMed Web of Science ®Google Scholar
• Yeganeh Sefidan F, Mohammadzadeh-Asl Y, Ghotaslou R. High-level resistance to aminoglycosides due to 16S rRNA methylation in enterobacteriaceae isolates. Microb Drug Resist. 2019;25:1261–1265. doi:10.1089/mdr.2018.017131211656
   PubMed Web of Science ®Google Scholar
• Chen Y, Zhou Z, Jiang Y, Yu Y. Emergence of NDM-1-producing Acinetobacter baumannii in China. J Antimicrob Chemother. 2011;66(6):1255–1259. doi:10.1093/jac/dkr08221398294
   PubMed Web of Science ®Google Scholar
• Bankevich A, Nurk S, Antipov D, et al. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 2012;19(5):455–477. doi:10.1089/cmb.2012.002122506599
   PubMed Web of Science ®Google Scholar
• Walker BJ, Abeel T, Shea T, et al. Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement. PLoS ONE. 2014;9(11):e112963. doi:10.1371/journal.pone.011296325409509
   PubMed Web of Science ®Google Scholar
• Grant JR, Stothard P. The CGView Server: a comparative genomics tool for circular genomes. Nucleic Acids Res. 2008;36(WebServer issue):W181–184. doi:10.1093/nar/gkn17918411202
   PubMed Web of Science ®Google Scholar
• Darling AE, Mau B, Perna NT. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS ONE. 2010;5(6):e11147. doi:10.1371/journal.pone.001114720593022
   PubMed Web of Science ®Google Scholar
• Carattoli A, Villa L, Poirel L, Bonnin RA, Nordmann P. Evolution of IncA/C blaCMY-(2)-carrying plasmids by acquisition of the blaNDM-(1) carbapenemase gene. Antimicrob Agents Chemother. 2012;56(2):783–786. doi:10.1128/AAC.05116-1122123704
   PubMed Web of Science ®Google Scholar
• Huang J, Wang M, Ding H, et al. New Delhi metallo-beta-lactamase-1 in carbapenem-resistant Salmonella strain, China. Emerg Infect Dis. 2013;19(12):2049–2051. doi:10.3201/eid1912.13005124274898
   PubMed Web of Science ®Google Scholar
• Tijet N, Richardson D, MacMullin G, Patel SN, Melano RG. Characterization of multiple NDM-1-producing Enterobacteriaceae isolates from the same patient. Antimicrob Agents Chemother. 2015;59(6):3648–3651. doi:10.1128/AAC.04862-1425845877
   PubMed Web of Science ®Google Scholar
• Hudson CM, Bent ZW, Meagher RJ, Williams KP. Resistance determinants and mobile genetic elements of an NDM-1-encoding Klebsiella pneumoniae strain. PLoS ONE. 2014;9(6):e99209. doi:10.1371/journal.pone.009920924905728
   PubMed Web of Science ®Google Scholar
• Galimand M, Courvalin P, Lambert T. Plasmid-mediated high-level resistance to aminoglycosides in Enterobacteriaceae due to 16S rRNA methylation. Antimicrob Agents Chemother. 2003;47(8):2565–2571. doi:10.1128/AAC.47.8.2565-2571.200312878520
   PubMed Web of Science ®Google Scholar
• Doi Y, Wachino JI, Arakawa Y. Aminoglycoside resistance: the emergence of acquired 16S ribosomal RNA methyltransferases. Infect Dis Clin North Am. 2016;30(2):523–537. doi:10.1016/j.idc.2016.02.01127208771
   PubMed Web of Science ®Google Scholar
• Guven Gokmen T, Nagiyev T, Meral M, Onlen C, Heydari F, Koksal F. NDM-1 and rmtC-producing klebsiella pneumoniae isolates in Turkey. Jundishapur J Microbiol. 2016;9(10):e33990. doi:10.5812/jjm27942358
   PubMed Web of Science ®Google Scholar
• Rahman M, Prasad KN, Pathak A, et al. RmtC and RmtF 16S rRNA methyltransferase in NDM-1-producing pseudomonas aeruginosa. Emerg Infect Dis. 2015;21(11):2059–2062. doi:10.3201/eid2111.15027126488937
   PubMed Web of Science ®Google Scholar
• Kapmaz M, Erdem F, Abulaila A, Yeniaras E, Oncul O, Aktas Z. First detection of NDM-1 with CTX-M-9, TEM, SHV and rmtC in Escherichia coli ST471 carrying IncI2, A/C and Y plasmids from clinical isolates in Turkey. J Global Antimicrob Resist. 2016;7:152–153. doi:10.1016/j.jgar.2016.10.001
   Web of Science ®Google Scholar
• Huang J, Deng S, Ren J, Tu J, Ye M, Wang M. Characterization of a blaNDM1harboring plasmid from a Salmonella enterica clinical isolate in China. Mol Med Rep. 2017;16(2):1087–1092. doi:10.3892/mmr.2017.673328627648
   PubMed Web of Science ®Google Scholar
• Partridge SR. Analysis of antibiotic resistance regions in Gram-negative bacteria. FEMS Microbiol Rev. 2011;35(5):820–855. doi:10.1111/j.1574-6976.2011.00277.x21564142
   PubMed Web of Science ®Google Scholar
• Poirel L, Bonnin RA, Boulanger A, Schrenzel J, Kaase M, Nordmann P. Tn125-related acquisition of blaNDM-like genes in Acinetobacter baumannii. Antimicrob Agents Chemother. 2012;56(2):1087–1089. doi:10.1128/AAC.05620-1122143526
   PubMed Web of Science ®Google Scholar
• Toleman MA, Spencer J, Jones L, Walsh TR. blaNDM-1 is a chimera likely constructed in Acinetobacter baumannii. Antimicrob Agents Chemother. 2012;56(5):2773–2776. doi:10.1128/AAC.06297-1122314529
   PubMed Web of Science ®Google Scholar
• Hopkins KL, Escudero JA, Hidalgo L, Gonzalez-Zorn B. 16S rRNA methyltransferase RmtC in Salmonella enterica serovar Virchow. Emerg Infect Dis. 2010;16(4):712–715. doi:10.3201/eid1604.09073620350396
   PubMed Web of Science ®Google Scholar