Application of NGS in Diagnosis of Tuberculous Pleurisy with Multiple Negative Tests: A Case Report

References

• Hooper C, Lee YC, Maskell N, Group BTSPG. Investigation of a unilateral pleural effusion in adults: british Thoracic Society Pleural Disease Guideline 2010. Thorax. 2010;65(Suppl 2):ii4–ii17. doi:10.1136/thx.2010.13697820696692
   PubMed Web of Science ®Google Scholar
• Jeanes C, O’Grady J. Diagnosing tuberculosis in the 21st century - Dawn of a genomics revolution? Int J Mycobacteriol. 2016;5(4):384–391.27931678
   PubMedGoogle Scholar
• Acharya B, Acharya A, Gautam S, et al. Advances in diagnosis of Tuberculosis: an update into molecular diagnosis of Mycobacterium tuberculosis. Mol Biol Rep. 2020;47(5):4065–4075. doi:10.1007/s11033-020-05413-732248381
   PubMed Web of Science ®Google Scholar
• Light RW. Update on tuberculous pleural effusion. Respirology. 2010;15(3):451–458.20345583
   PubMed Web of Science ®Google Scholar
• Liu YC, Shin-Jung Lee S, Chen YS, Tu HZ, Chen BC, Huang TS. Differential diagnosis of tuberculous and malignant pleurisy using pleural fluid adenosine deaminase and interferon gamma in Taiwan. J Microbiol Immunol Infect. 2011;44(2):88–94. doi:10.1016/j.jmii.2010.04.00121439509
   PubMedGoogle Scholar
• Diacon AH, Van de Wal BW, Wyser C, et al. Diagnostic tools in tuberculous pleurisy: a direct comparative study. Eur Respir J. 2003;22(4):589–591. doi:10.1183/09031936.03.00017103a14582908
   PubMed Web of Science ®Google Scholar
• Anie Y, Sumi S, Varghese P, Madhavi LG, Sathish M, Radhakrishnan VV. Diagnostic approaches in patients with tuberculous pleural effusion. Diagn Microbiol Infect Dis. 2007;59(4):389–394. doi:10.1016/j.diagmicrobio.2007.06.02217878062
   PubMed Web of Science ®Google Scholar
• Zhang HC, Ai JW, Cui P, et al. Incremental value of metagenomic next generation sequencing for the diagnosis of suspected focal infection in adults. J Infect. 2019;79(5):419–425. doi:10.1016/j.jinf.2019.08.01231442461
   PubMed Web of Science ®Google Scholar
• Miao Q, Ma Y, Wang Q, et al. Microbiological Diagnostic Performance of Metagenomic Next-generation Sequencing When Applied to Clinical Practice. Clin Infect Dis. 2018;67(suppl_2):S231–S240. doi:10.1093/cid/ciy69330423048
   PubMed Web of Science ®Google Scholar
• Jeon YJ, Zhou Y, Li Y, et al. The feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platform. PLoS One. 2014;9(10):e110240. doi:10.1371/journal.pone.011024025329639
   PubMed Web of Science ®Google Scholar
• Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 2009;25(14):1754–1760. doi:10.1093/bioinformatics/btp32419451168
   PubMed Web of Science ®Google Scholar
• Jacob HJ. Next-generation sequencing for clinical diagnostics. N Engl J Med. 2013;369(16):1557–1558. doi:10.1056/NEJMe131084624088040
   PubMed Web of Science ®Google Scholar
• Xu A, Zhu H, Gao B, et al. Diagnosis of severe community-acquired pneumonia caused by Acinetobacter baumannii through next-generation sequencing: a case report. BMC Infect Dis. 2020;20(1):45. doi:10.1186/s12879-019-4733-531941459
   PubMed Web of Science ®Google Scholar
• Jin W, Miao Q, Wang M, et al. A rare case of adrenal gland abscess due to anaerobes detected by metagenomic next-generation sequencing. Ann Transl Med. 2020;8(5):247. doi:10.21037/atm.2020.01.12332309394
   PubMed Web of Science ®Google Scholar
• Huang Y, Ma Y, Miao Q, et al. Arthritis caused by Legionella micdadei and Staphylococcus aureus: metagenomic next-generation sequencing provides a rapid and accurate access to diagnosis and surveillance. Ann Transl Med. 2019;7(20):589. doi:10.21037/atm.2019.09.8131807570
   PubMed Web of Science ®Google Scholar
• He BC, Liu LL, Chen BL, Zhang F, Su X. The application of next-generation sequencing in diagnosing invasive pulmonary aspergillosis: three case reports. Am J Transl Res. 2019;11(4):2532–2539.31105860
   PubMed Web of Science ®Google Scholar
• Xiao N, Gai W, Hu WG, Li JX, Zhang Y, Zhao XY. Next-generation-sequencing technology used for the detection of Mycoplasma hominis in renal cyst fluid: a case report. Infect Drug Resist. 2019;12:1073–1079. doi:10.2147/IDR.S19867831213854
   PubMed Web of Science ®Google Scholar
• Zhang H, Zhan D, Chen D, et al. Next-generation sequencing diagnosis of severe pneumonia from fulminant psittacosis with multiple organ failure: a case report and literature review. Ann Transl Med. 2020;8(6):401. doi:10.21037/atm.2020.03.1732355845
   PubMed Web of Science ®Google Scholar
• Fang M, Weng X, Chen L, et al. Fulminant central nervous system varicella-zoster virus infection unexpectedly diagnosed by metagenomic next-generation sequencing in an HIV-infected patient: a case report. BMC Infect Dis. 2020;20(1):1. doi:10.1186/s12879-020-4872-8
   Web of Science ®Google Scholar
• Zhang Y, Hong K, Zou Y, Bu H. Rapid detection of human herpes virus by next-generation sequencing in a patient with encephalitis. Virol J. 2019;16(1):104. doi:10.1186/s12985-019-1205-x31419985
   PubMed Web of Science ®Google Scholar
• Wollants E, Smolders D, Naesens R, et al. Use of Next-Generation Sequencing for Diagnosis of West Nile Virus Infection in Patient Returning to Belgium from Hungary. Emerg Infect Dis. 2018;24(12):2380–2382. doi:10.3201/eid2412.18049430457549
   PubMed Web of Science ®Google Scholar
• Xie M, Zhou Z, Guo S, Li Z, Zhao H, Deng J. Next-generation sequencing specifies Angiostrongylus eosinophilic meningoencephalitis in infants: two case reports. Medicine. 2019;98(35):e16985. doi:10.1097/MD.000000000001698531464947
   PubMed Web of Science ®Google Scholar
• Comas I, Gil A. [Next generation sequencing for the diagnostics and epidemiology of tuberculosis]. Enferm Infecc Microbiol Clin. 2016;34(Suppl 3):32–39. doi:10.1016/S0213-005X(16)30217-8. Spanish.27474245
   PubMedGoogle Scholar