Phenotypic and Molecular Characteristics of Community-Associated Staphylococcus aureus Infection in Neonates

References

• Tong SYC, Davis JS, Eichenberger E, Holland TL, Fowler VG. Staphylococcus aureus infections: epidemiology, pathophysiology, clinical manifestations, and management. Clin Microbiol Rev. 2015;28:603–661. doi:10.1128/CMR.00134-1426016486
   PubMed Web of Science ®Google Scholar
• Kourtis AP, Hatfield K, Baggs J, Mu Y, See I, Epson E. Vital signs: epidemiology and recent trends in methicillin-resistant and in methicillin-susceptible Staphylococcus aureus bloodstream infections — united States. MMWR Morb Mortal Wkly Rep. 2019;68:214–219.30845118
   PubMed Web of Science ®Google Scholar
• Liu Y, Xu Z, Yang Z, Sun J, Ma L. Characterization of community-associated Staphylococcus aureus from skin and soft-tissue infections: a multicenter study in China. Emerg Microbes Infect. 2016;5:e127. doi:10.1038/emi.2016.12827999423
   PubMed Web of Science ®Google Scholar
• Harris SR, Cartwright EJP, Török ME, et al. Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study. Lancet Infect Dis. 2013;13:130–136. doi:10.1016/S1473-3099(12)70268-223158674
   PubMed Web of Science ®Google Scholar
• Brown NM, Reacher M, Rice W, et al. An outbreak of meticillin-resistant Staphylococcus aureus colonization in a neonatal intensive care unit: use of a case-control study to investigate and control it and lessons learnt. J Hosp Infect. 2019;103(1):35–43. doi:10.1016/j.jhin.2019.05.00931132394
   PubMed Web of Science ®Google Scholar
• Cheng VCC, Wong SC, Cao H, et al. Whole-genome sequencing data-based modeling for the investigation of an outbreak of community-associated methicillin-resistant Staphylococcus aureus in a neonatal intensive care unit in Hong Kong. Eur J Clin Microbiol Infect Dis. 2019;38:563–573.30680562
   PubMed Web of Science ®Google Scholar
• Maraqa NF, Aigbivbalu L, Masnita-Iusan C, et al. Prevalence of and risk factors for methicillin-resistant Staphylococcus aureus colonization and infection among infants at a level III neonatal intensive care unit. Am J Infect Control. 2011;39:35–41. doi:10.1016/j.ajic.2010.07.01321281885
   PubMed Web of Science ®Google Scholar
• de Lencastre H, Geng W, Qi Y, et al. Epidemiology of Staphylococcus aureus in neonates on admission to a Chinese neonatal intensive care unit. PLoS One. 2020;15:e0211845.32053585
   PubMed Web of Science ®Google Scholar
• Washam M, Woltmann J, Haberman B, Haslam D, Staat MA. Risk factors for methicillin-resistant Staphylococcus aureus colonization in the neonatal intensive care unit: A systematic review and meta-analysis. Am J Infect Control. 2017;45:1388–1393. doi:10.1016/j.ajic.2017.06.02129195583
   PubMed Web of Science ®Google Scholar
• Giuffrè M, Amodio E, Bonura C, et al. Methicillin-resistant Staphylococcus aureus nasal colonization in a level III neonatal intensive care unit: incidence and risk factors. Am J Infect Control. 2015;43:476–481. doi:10.1016/j.ajic.2014.12.02725726131
   PubMed Web of Science ®Google Scholar
• Lavie-Nevo K, Srigley JA, Al-Rawahi GN, et al. Prevalence and clinical impact of methicillin-resistant Staphylococcus aureus colonization among infants at a level III neonatal intensive care unit. Am J Infect Control. 2019;47:1336–1339. doi:10.1016/j.ajic.2019.04.17331253554
   PubMed Web of Science ®Google Scholar
• Murai T, Okazaki K, Kinoshita K, et al. Comparison of USA300 with non-USA300 methicillin-resistant Staphylococcus aureus in a neonatal intensive care unit. Int J Infect Dis. 2019;79:134–138. doi:10.1016/j.ijid.2018.11.02030503654
   PubMed Web of Science ®Google Scholar
• Laabei M, Recker M, Rudkin JK, et al. Predicting the virulence of MRSA from its genome sequence. Genome Res. 2014;24:839–849. doi:10.1101/gr.165415.11324717264
   PubMed Web of Science ®Google Scholar
• Centers for Disease Control and Prevention. Community-associated MRSA information for clinicians. infection control topics. centers for disease control and prevention. Atlanta, GA Available from: http://www.cdc.gov/ncidod/dhqp/ar_mrsa_ca_clinicians.html#4. Accessed 23, 2005.
   Google Scholar
• Zhang K, Sparling J, Chow BL, et al. New quadriplex PCR assay for detection of methicillin and mupirocin resistance and simultaneous discrimination of Staphylococcus aureus from coagulase-negative staphylococci. J Clin Microbiol. 2004;42:4947–4955. doi:10.1128/JCM.42.11.4947-4955.200415528678
   PubMed Web of Science ®Google Scholar
• Clinical and Laboratory Standards Institute. Performance Standards for Antimicrobial Susceptibility Testing; 27th Informational Supplement. M100-S28. Wayne, PA: Clinical and Laboratory Standards Institute; 2018.
   Google Scholar
• Magiorakos AP, Srinivasan A, Carey RB, et al. Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect. 2012;18:268–281.21793988
   PubMed Web of Science ®Google Scholar
• Enright MC, Day NP, Davies CE, Peacock SJ, Spratt BG. Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones ofStaphylococcus aureus. J Clin Microbiol. 2000;38:1008–1015. doi:10.1128/JCM.38.3.1008-1015.200010698988
   PubMed Web of Science ®Google Scholar
• Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt BG. eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. J Bacteriol. 2004;186:1518–1530. doi:10.1128/JB.186.5.1518-1530.200414973027
   PubMed Web of Science ®Google Scholar
• Zhang K, McClure J-A, Elsayed S, Louie T, Conly JM. Novel multiplex PCR assay for characterization and concomitant subtyping of staphylococcal cassette chromosome mec types I to V in methicillin-resistant Staphylococcus aureus. J Clin Microbiol. 2005;43:5026–5033. doi:10.1128/JCM.43.10.5026-5033.200516207957
   PubMed Web of Science ®Google Scholar
• Lina G, Quaglia A, Reverdy ME, Leclercq R, Vandenesch F, Etienne J. Distribution of genes encoding resistance to macrolides, lincosamides, and streptogramins among staphylococci. Antimicrob Agents Chemother. 1999;43:1062–1066. doi:10.1128/AAC.43.5.106210223914
   PubMed Web of Science ®Google Scholar
• Aarestrup FM, Agerso Y, Gerner-Smidt P, Madsen M, Jensen LB. Comparison of antimicrobial resistance phenotypes and resistance genes in Enterococcus faecalis and Enterococcus faecium from humans in the community, broilers, and pigs in Denmark. Diagn Microbiol Infect Dis. 2000;37:127–137. doi:10.1016/S0732-8893(00)00130-910863107
   PubMed Web of Science ®Google Scholar
• Wamel W, Rooijakkers SHM, Ruyken M, Kessel K, Strijp J. The innate immune modulators staphylococcal complement inhibitor and chemotaxis inhibitory protein of Staphylococcus aureus are located on beta-hemolysin-converting bacteriophages. J Bacteriol. 2006;188:1310–1315. doi:10.1128/JB.188.4.1310-1315.200616452413
   PubMed Web of Science ®Google Scholar
• Omoe K, Hu DL, Takahashi-Omoe H, Nakane A, Shinagawa K. Comprehensive analysis of classical and newly described staphylococcal superantigenic toxin genes in Staphylococcus aureus isolates. FEMS Microbiol Lett. 2005;246:191–198. doi:10.1016/j.femsle.2005.04.00715899405
   PubMed Web of Science ®Google Scholar
• Jarraud S, Mougel C, Thioulouse J, et al. Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease. Infect Immun. 2002;70:631–641. doi:10.1128/IAI.70.2.631-641.200211796592
   PubMed Web of Science ®Google Scholar
• McClure J-A, Conly JM, Lau V, et al. Novel multiplex PCR assay for detection of the staphylococcal virulence marker Panton-Valentine leukocidin genes and simultaneous discrimination of methicillin-susceptible from -resistant staphylococci. J Clin Microbiol. 2006;44:1141–1144. doi:10.1128/JCM.44.3.1141-1144.200616517915
   PubMed Web of Science ®Google Scholar
• Jolley KA, Feil EJ, Chan MS, Maiden MC. Sequence type analysis and recombinational tests (START). Bioinformatics. 2001;17:1230–1231. doi:10.1093/bioinformatics/17.12.123011751234
   PubMed Web of Science ®Google Scholar
• Letunic I, Bork P. Interactive Tree Of Life (iTOL) v4: recent updates and new developments. Nucleic Acids Res. 2019;47:W256–W9. doi:10.1093/nar/gkz23930931475
   PubMed Web of Science ®Google Scholar
• Pocket book of hospital care for children: guidelines for the management of common childhood illnesses. 2nd edition. Geneva: World Health Organization; 2013 Available from: https://www.ncbi.nlm.nih.gov/books/NBK154447/. Accessed 127, 2020.
   Google Scholar
• Li JY, Chen SQ, Yan YY, et al. Identification and antimicrobial resistance of pathogens in neonatal septicemia in China—A meta-analysis. Int J Infect Dis. 2018;71:89–93. doi:10.1016/j.ijid.2018.04.79429689386
   PubMed Web of Science ®Google Scholar
• Darboe S, Dobreniecki S, Jarju S, et al. Prevalence of Panton-Valentine Leukocidin (PVL) and antimicrobial resistance in community-acquired clinical Staphylococcus aureus in an urban gambian hospital: a 11-year period retrospective pilot study. Front Cell Infect Microbiol. 2019;9:170.31192162
   PubMed Web of Science ®Google Scholar
• Liang B, Mai J, Liu Y, et al. Prevalence and characterization of Staphylococcus aureus isolated from women and children in Guangzhou, China. Front Microbiol. 2018;9:2790. doi:10.3389/fmicb.2018.0279030505300
   PubMed Web of Science ®Google Scholar
• Salazar-Ospina L, Jiménez JN. High frequency of methicillin-susceptible and methicillin-resistant Staphylococcus aureus in children under 1 year old with skin and soft tissue infections. J Pediatr. 2018;94:380–389. doi:10.1016/j.jped.2017.06.020
   Web of Science ®Google Scholar
• Wang X, Liu Q, Zhang H, et al. Molecular characteristics of community-associated Staphylococcus aureus isolates from pediatric patients with bloodstream infections between 2012 and 2017 in Shanghai, China. Front Microbiol. 2018;9:1211. doi:10.3389/fmicb.2018.0121129928269
   PubMed Web of Science ®Google Scholar
• Imani Fooladi AA, Ashrafi E, Tazandareh SG, et al. The distribution of pathogenic and toxigenic genes among MRSA and MSSA clinical isolates. Microb Pathog. 2015;81:60–66. doi:10.1016/j.micpath.2015.03.01325778391
   PubMed Web of Science ®Google Scholar
• Deinhardt-Emmer S, Sachse S, Geraci J, et al. Virulence patterns of Staphylococcus aureus strains from nasopharyngeal colonization. J Hosp Infect. 2018;100:309–315. doi:10.1016/j.jhin.2017.12.01129253623
   PubMed Web of Science ®Google Scholar
• Hulten KG, Mason EO, Lamberth LB, Forbes AR, Revell PA, Kaplan SL. Analysis of invasive community-acquired methicillin-susceptible staphylococcus aureus infections during a period of declining community acquired methicillin-resistant staphylococcus aureus infections at a large Children’s Hospital. Pediatr Infect Dis J. 2018;37:235–241. doi:10.1097/INF.000000000000175328859018
   PubMed Web of Science ®Google Scholar
• Wang Y, Liu Q, Liu Q, et al. Phylogenetic analysis and virulence determinant of the host-adapted Staphylococcus aureus lineage ST188 in China. Emerg Microbes Infect. 2018;7:45. doi:10.1038/s41426-018-0048-729593254
   PubMed Web of Science ®Google Scholar
• Li X, Zhou Y, Zhan X, Huang W, Wang X. Breast milk is a potential reservoir for livestock-associated staphylococcus aureus and community-associated Staphylococcus aureus in Shanghai, China. Front Microbiol. 2017;8:2639.29375508
   PubMed Web of Science ®Google Scholar
• Lin J, Wu C, Yan C, et al. A prospective cohort study of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus carriage in neonates: the role of maternal carriage and phenotypic and molecular characteristics. Infect Drug Resist. 2018;11:555–565. doi:10.2147/IDR.S15752229731644
   PubMed Web of Science ®Google Scholar
• King JM, Kulhankova K, Stach CS, Vu BG, Salgado-Pabón W. Phenotypes and Virulence among Staphylococcus aureus USA100, USA200, USA300, USA400, and USA600 Clonal Lineages. mSphere. 2016;1:e00071–16. doi:10.1128/mSphere.00071-1627303750
   PubMed Web of Science ®Google Scholar
• Guo D, Liu Y, Han C, Chen Z, Ye X. Phenotypic and molecular characteristics of methicillin-resistant and methicillin-susceptible Staphylococcus aureus isolated from pigs: implication for livestock-association markers and vaccine strategies. Infect Drug Resist. 2018;11:1299–1307. doi:10.2147/IDR.S17362430197527
   PubMed Web of Science ®Google Scholar
• Köck R, Schaumburg F, Mellmann A, et al. Livestock-associated methicillin-resistant Staphylococcus aureus (MRSA) as causes of human infection and colonization in Germany. PLoS One. 2013;8:e55040.23418434
   PubMed Web of Science ®Google Scholar
• Eibach D, Nagel M, Hogan B, et al. Nasal Carriage of Staphylococcus aureus among children in the ashanti region of ghana. PLoS One. 2017;12:e0170320. doi:10.1371/journal.pone.017032028107412
   PubMed Web of Science ®Google Scholar
• Mrochen DM, Grumann D, Schulz D, et al. Global spread of mouse-adapted Staphylococcus aureus lineages CC1, CC15, and CC88 among mouse breeding facilities. Int J Med Microbiol. 2018;308:598–606. doi:10.1016/j.ijmm.2017.11.00629174495
   PubMed Web of Science ®Google Scholar
• Williamson DA, Ritchie SR, Roberts SA, et al. Clinical and molecular epidemiology of community-onset invasive Staphylococcus aureus infection in New Zealand children. Epidemiol Infect. 2014;142:1713–1721. doi:10.1017/S095026881400005324534254
   PubMed Web of Science ®Google Scholar
• Kurt K, Rasigade J-P, Laurent F, et al. Subpopulations of Staphylococcus aureus clonal complex 121 are associated with distinct clinical entities. PLoS One. 2013;8:e58155.23505464
   PubMed Web of Science ®Google Scholar