Co-occurrence of Klebsiella variicola and Klebsiella pneumoniae Both Carrying bla_KPC from a Respiratory Intensive Care Unit Patient

References

• Rodríguez-Baño J, Gutiérrez-Gutiérrez B, Machuca I, Pascual A. Treatment of infections caused by extended-spectrum-beta-lactamase-, AmpC-, and carbapenemase-producing enterobacteriaceae. Clin Microbiol Rev. 2018;31(2):e00079–e00117. doi:10.1128/CMR.00079-1729444952
   PubMed Web of Science ®Google Scholar
• Zhang F, Ding M, Yan X, et al. Carbapenem-resistant K. pneumoniae exhibiting clinically undetected amikacin and meropenem heteroresistance leads to treatment failure in a murine model of infection. Microb Pathog. 2021;160:105162. doi:10.1016/j.micpath.2021.10516234461245
   PubMed Web of Science ®Google Scholar
• Bonomo RA, Burd EM, Conly J, et al. Carbapenemase-producing organisms: a global scourge. Clin Infect Dis. 2018;66(8):1290–1297. doi:10.1093/cid/cix89329165604
   PubMed Web of Science ®Google Scholar
• Nordmann P, Naas T, Poirel L. Global spread of carbapenemase-producing Enterobacteriaceae. Emerg Infect Dis. 2011;17(10):1791–1798. doi:10.3201/eid1710.11065522000347
   PubMed Web of Science ®Google Scholar
• Fu L, Wang S, Zhang Z, et al. Whole genome sequence of bla(NDM) and bla(KPC) co-producing Klebsiella pneumoniae isolate KSH203 with capsular serotype K25 belonging to ST11 from China. J Glob Antimicrob Resist. 2020;20:272–274. doi:10.1016/j.jgar.2020.01.00632007616
   PubMed Web of Science ®Google Scholar
• Liu X, Zhang J, Li Y, et al. Diversity and frequency of resistance and virulence genes in blaKPC and blaNDM co-producing Klebsiella pneumoniae strains from China. Infect Drug Resist. 2019;12:2819.31571938
   PubMed Web of Science ®Google Scholar
• Liu Y, Zhang H, Zhang X, et al. Characterization of an NDM-19-producing Klebsiella pneumoniae strain harboring 2 resistance plasmids from China. Diagn Microbiol Infect Dis. 2019;93(4):355–361. doi:10.1016/j.diagmicrobio.2018.11.00730552032
   PubMed Web of Science ®Google Scholar
• Di Tella D, Tamburro M, Guerrizio G, Fanelli I, Sammarco ML, Ripabelli G. Molecular epidemiological insights into colistin-resistant and carbapenemases-producing clinical Klebsiella pneumoniae isolates. Infect Drug Resist. 2019;12:3783–3795. doi:10.2147/IDR.S22641631819559
   PubMed Web of Science ®Google Scholar
• Hu R, Li Q, Zhang F, Ding M, Liu J, Zhou Y. Characterisation of bla(NDM-5) and bla(KPC-2) co-occurrence in K64-ST11 carbapenem-resistant Klebsiella pneumoniae. J Glob Antimicrob Resist. 2021;27:63–66. doi:10.1016/j.jgar.2021.08.00934482020
   PubMed Web of Science ®Google Scholar
• Tang L, Huang J, She J, Zhao K, Zhou Y. Co-Occurrence of the bla (KPC-2) and Mcr-3.3 gene in aeromonas caviae SCAc2001 isolated from patients with diarrheal disease. Infect Drug Resist. 2020;13:1527–1536. doi:10.2147/IDR.S24555332547122
   PubMed Web of Science ®Google Scholar
• Kopotsa K, Osei Sekyere J, Mbelle NM. Plasmid evolution in carbapenemase-producing Enterobacteriaceae: a review. Ann NY Acad Sci. 2019;1457(1):61–91. doi:10.1111/nyas.1422331469443
   PubMed Web of Science ®Google Scholar
• Kizny Gordon A, Phan HTT, Lipworth SI, et al. Genomic dynamics of species and mobile genetic elements in a prolonged blaIMP-4-associated carbapenemase outbreak in an Australian hospital. J Antimicrob Chemother. 2020;75(4):873–882. doi:10.1093/jac/dkz52631960024
   PubMed Web of Science ®Google Scholar
• Liang Q, Yin Z, Zhao Y, et al. Sequencing and comparative genomics analysis of the IncHI2 plasmids pT5282-mphA and p112298-catA and the IncHI5 plasmid pYNKP001-dfrA. Int J Antimicrob Agents. 2017;49(6):709–718. doi:10.1016/j.ijantimicag.2017.01.02128390961
   PubMed Web of Science ®Google Scholar
• Ding M, Shi J, Ud Din A, et al. Co-infections of two carbapenemase-producing Enterobacter hormaechei clinical strains isolated from the same diabetes individual in China. J Med Microbiol. 2021;70(3):001316. doi:10.1099/jmm.0.001316.
   Web of Science ®Google Scholar
• Xu J, He F. Genomic analysis of two bacterial strains co-isolated from a urinary tract infection: NDM-1-producing Enterobacter cloacae accompanied by extended-spectrum β-lactamase-producing Escherichia coli. J Glob Antimicrob Resist. 2019;17:198–200. doi:10.1016/j.jgar.2019.04.00731005730
   PubMed Web of Science ®Google Scholar
• Karad DD, Somani Y, Khande H, Yadav B, Kharat AS. Molecular characterization of a multidrug-resistant/pandrug-resistant nosocomial polymicrobial infection with Klebsiella pneumoniae, Providencia rettgeri, and Acinetobacter baumannii from Rural Maharashtra, India. Acta Biochim Pol. 2020;67(3):387–392.32735431
   PubMed Web of Science ®Google Scholar
• Garza-Ramos U, Moreno-Dominguez S, Hernández-Castro R, et al. Identification and characterization of imipenem-resistant Klebsiella pneumoniae and Susceptible Klebsiella variicola isolates obtained from the same patient. Microb Drug Resist. 2016;22(3):179–184. doi:10.1089/mdr.2015.018126571390
   PubMed Web of Science ®Google Scholar
• Potter RF, Lainhart W, Twentyman J, et al. Population structure, antibiotic resistance, and uropathogenicity of Klebsiella variicola. mBio. 2018;9(6);e02481–e02518. doi:10.1128/mBio.02481-18.30563902
   PubMed Web of Science ®Google Scholar
• Fontana L, Bonura E, Lyski Z, Messer W. The brief case: Klebsiella variicola-identifying the misidentified. J Clin Microbiol. 2019;57(1);e00826–e00918. doi:10.1128/JCM.00826-1830602547
   PubMed Web of Science ®Google Scholar
• Martínez J, Martínez L, Rosenblueth M, Silva J, Martínez-Romero E. How are gene sequence analyses modifying bacterial taxonomy? The case of Klebsiella. Int Microbiol. 2004;7(4):261–268.15666246
   PubMed Web of Science ®Google Scholar
• Brisse S, Passet V, Grimont PAD. Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola. Int J Syst Evol Microbiol. 2014;64(Pt 9):3146–3152.24958762
   PubMed Web of Science ®Google Scholar
• Rodríguez-Medina N, Barrios-Camacho H, Duran-Bedolla J, Garza-Ramos U. Klebsiella variicola: an emerging pathogen in humans. Emerg Microbes Infect. 2019;8(1):973–988. doi:10.1080/22221751.2019.163498131259664
   PubMed Web of Science ®Google Scholar
• Fu L, Huang M, Zhang XZ, et al. Frequency of virulence factors in high biofilm formation blaKPC-2 producing Klebsiella pneumoniae strains from hospitals. Microb Pathog. 2018;116:168–172. doi:10.1016/j.micpath.2018.01.03029360567
   PubMed Web of Science ®Google Scholar
• Bortolaia V, Kaas RS, Ruppe E, et al. ResFinder 4.0 for predictions of phenotypes from genotypes. J Antimicrob Chemother. 2020;75(12):3491–3500. doi:10.1093/jac/dkaa34532780112
   PubMed Web of Science ®Google Scholar
• Liu B, Zheng D, Jin Q, Chen L, Yang J. VFDB 2019: a comparative pathogenomic platform with an interactive web interface. Nucleic Acids Res. 2019;47(D1):D687–D692. doi:10.1093/nar/gky108030395255
   PubMed Web of Science ®Google Scholar
• Elisa E, Carloni F, Francesca E, et al. Comparative analysis of the standard PCR-Based Replicon Typing (PBRT) with the commercial PBRT-KIT. Plasmid. 2017;90:10–14. doi:10.1016/j.plasmid.2017.01.00528137396
   PubMed Web of Science ®Google Scholar
• Han R, Shi Q, Wu S, et al. Dissemination of carbapenemases (KPC, NDM, OXA-48, IMP, and VIM) among carbapenem-resistant Enterobacteriaceae isolated from adult and children patients in China. Front Cell Infect Microbiol. 2020;10:314. doi:10.3389/fcimb.2020.0031432719751
   PubMed Web of Science ®Google Scholar
• Tzouvelekis LS, Markogiannakis A, Psichogiou M, Tassios PT, Daikos GL. Carbapenemases in Klebsiella pneumoniae and other Enterobacteriaceae: an evolving crisis of global dimensions. Clin Microbiol Rev. 2012;25(4):682–707. doi:10.1128/CMR.05035-1123034326
   PubMed Web of Science ®Google Scholar
• Poirel L, Walsh TR, Cuvillier V, Nordmann P. Multiplex PCR for detection of acquired carbapenemase genes. Diagn Microbiol Infect Dis. 2011;70(1):119–123. doi:10.1016/j.diagmicrobio.2010.12.00221398074
   PubMed Web of Science ®Google Scholar
• Nasri E, Subirats J, Sànchez-Melsió A, Mansour HB, Borrego CM, Balcázar JL. Abundance of carbapenemase genes (bla(KPC), bla(NDM) and bla(OXA-48)) in wastewater effluents from Tunisian hospitals. Environ Pollut. 2017;229:371–374. doi:10.1016/j.envpol.2017.05.09528614760
   PubMed Web of Science ®Google Scholar
• Ripabelli G, Sammarco ML, Scutellà M, Felice V, Tamburro M. Carbapenem-Resistant KPC- and TEM-producing Escherichia coli ST131 isolated from a hospitalized patient with urinary tract infection: first isolation in Molise Region, Central Italy, July 2018. Microb Drug Resist. 2020;26(1):38–45. doi:10.1089/mdr.2019.008531386590
   PubMed Web of Science ®Google Scholar
• Godlee C, Cerny O, Durkin CH, Holden DW. SrcA is a chaperone for the Salmonella SPI-2 type three secretion system effector SteD. Microbiology. 2019;165(1):15–25. doi:10.1099/mic.0.00073230457515
   PubMed Web of Science ®Google Scholar
• Esmailnia E, Amani J, Gargari SLM. Identification of novel vaccine candidate against Salmonella enterica serovar Typhi by reverse vaccinology method and evaluation of its immunization. Genomics. 2020;112(5):3374–3381. doi:10.1016/j.ygeno.2020.06.02232565239
   PubMed Web of Science ®Google Scholar
• Musafer HK, Kuchma SL, Naimie AA, Schwartzman JD, Al-Mathkhury HJ, O’Toole GA. Investigating the link between imipenem resistance and biofilm formation by Pseudomonas aeruginosa. Microb Ecol. 2014;68(1):111–120. doi:10.1007/s00248-013-0361-624435545
   PubMed Web of Science ®Google Scholar
• Kuchma SL, Griffin EF, O’Toole GA. Minor pilins of the type IV pilus system participate in the negative regulation of swarming motility. J Bacteriol. 2012;194(19):5388–5403. doi:10.1128/JB.00899-1222865844
   PubMed Web of Science ®Google Scholar
• Frost LS, Leplae R, Summers AO, Toussaint A. Mobile genetic elements: the agents of open source evolution. Nat Rev Microbiol. 2005;3(9):722–732. doi:10.1038/nrmicro123516138100
   PubMed Web of Science ®Google Scholar
• Reyes JA, Melano R, Cárdenas PA, Trueba G. Mobile genetic elements associated with carbapenemase genes in South American Enterobacterales. Braz J Infect Dis. 2020;24(3):231–238. doi:10.1016/j.bjid.2020.03.00232325019
   PubMed Web of Science ®Google Scholar
• Zhang X, Li F, Cui S, et al. Prevalence and distribution characteristics of bla(KPC-2) and bla(NDM-1) genes in Klebsiella pneumoniae. Infect Drug Resist. 2020;13:2901–2910. doi:10.2147/IDR.S25363132903853
   PubMed Web of Science ®Google Scholar
• Sekizuka T, Yatsu K, Inamine Y, et al. Complete genome sequence of a bla(KPC-2)-positive Klebsiella pneumoniae strain isolated from the effluent of an urban Sewage treatment plant in Japan. mSphere. 2018;3(5). doi:10.1128/mSphere.00314-18.
   Web of Science ®Google Scholar
• Yao Y, Lazaro-Perona F, Falgenhauer L, et al. Insights into a novel bla(KPC-2)-encoding IncP-6 plasmid reveal carbapenem-resistance circulation in several Enterobacteriaceae species from wastewater and a hospital source in Spain. Front Microbiol. 2017;8:1143. doi:10.3389/fmicb.2017.0114328702005
   PubMed Web of Science ®Google Scholar