A Comprehensive Evaluation of a Loop-Mediated Isothermal Amplification Assay for the Diagnosis of Pulmonary Tuberculosis in Children Using Bronchoalveolar Lavage Fluid

References

• World Health Organization. Global Tuberculosis Report 2020. Geneva: World Health Organization; 2020.
   Google Scholar
• Lamb GS, Starke JR. Tuberculosis in infants and children. Microbiol Spectr. 2017;5:541–569. doi:10.1128/microbiolspec.TNMI7-0037-2016
   Google Scholar
• Gupte S. Short textbook of medical microbiology. In: Mycobacteria. 7th ed. New Delhi, India: Jaypee Press; 1999:264–283.
   Google Scholar
• Cruz AT, Starke JR. Clinical manifestations of tuberculosis in children. Paediatr Respir Rev. 2007;8:8107–8117.
   Web of Science ®Google Scholar
• Moore DP, Klugman KP, Madhi SA. Role of Streptococcus pneumoniae in hospitalization for acute community-acquired pneumonia associated with culture-confirmed Mycobacterium tuberculosis in children: a pneumococcal conjugate vaccine probe study. Pediatr Infect Dis J. 2010;29:1099–1104. doi:10.1097/INF.0b013e3181eaefff
   PubMed Web of Science ®Google Scholar
• World Health Organization. WHO Guidelines Approved by the Guidelines Review Committee. World Health Organization; 2013.
   Google Scholar
• Itani W, Matsuyama S, Azhar EI. Development of fluorescent reverse transcription loop-mediated isothermal amplification (RT-LAMP) using quenching probes for the detection of the Middle East respiratory syndrome coronavirus. J Virol Methods. 2018;258:41–48. doi:10.1016/j.jviromet.2018.05.006
   Web of Science ®Google Scholar
• Bojang AL, Mendy FS, Tientcheu LD, et al. Comparison of TB-LAMP, GeneXpert MTB/RIF and culture for diagnosis of pulmonary tuberculosis in The Gambia. J Infect. 2016;72:332–337. doi:10.1016/j.jinf.2015.11.011
   PubMed Web of Science ®Google Scholar
• World Health Organization. The Use of Loop-Mediated Isothermal Amplification (TB-LAMP) for the Diagnosis of Pulmonary Tuberculosis: Policy Guidance. Geneva: World Health Organization; 2016.
   Google Scholar
• Dayal R, Yadav A, Agarwal D, et al. Comparison of diagnostic yield of tuberculosis loop-mediated isothermal amplification assay with cartridge-based nucleic acid amplification test, acid-fast bacilli microscopy, and mycobacteria growth indicator tube culture in children with pulmonary tuberculosis. J Pediatric Infect Dis Soc. 2021;10:83–87. doi:10.1093/jpids/piaa019
   Web of Science ®Google Scholar
• Detjen AK, DiNardo AR, Leyden J, et al. Xpert MTB/RIF assay for the diagnosis of pulmonary tuberculosis in children: a systematic review and meta-analysis. Lancet Respir Med. 2015;3:451–461. doi:10.1016/S2213-2600(15)00095-8
   PubMed Web of Science ®Google Scholar
• Nicol MP, Spiers K, Workman L, et al. Xpert MTB/RIF testing of stool samples for the diagnosis of pulmonary tuberculosis in children. Clin Infect Dis. 2013;57:e18–e21. doi:10.1093/cid/cit230
   PubMed Web of Science ®Google Scholar
• Petrović S. Diagnostic value of certain methods for isolation of Mycobacterium tuberculosis in children with suspected pulmonary tuberculosis. Med Pregl. 2005;58:231–235. doi:10.2298/MPNS0506231P
   Google Scholar
• Graham SM, Ahmed T, Amanullah F, et al. Evaluation of tuberculosis diagnostics in children: 1. Proposed clinical case definitions for classification of intrathoracic tuberculosis disease. Consensus from an expert panel. J Infect Dis. 2012;205(Suppl2):S199–208. doi:10.1093/infdis/jis008
   Web of Science ®Google Scholar
• Akhtar M. Technical Guide: Sputum Examination for Tuberculosis by Direct Microscopy in Low Income Countries. 5th ed. Paris, France: International Union Against Tuberculosis and Lung Disease; 2000.
   Google Scholar
• Siddiqi SH, Rüsch-Gerdes S. MGIT Procedure Manual. Geneva: FIND; 2006.
   Google Scholar
• Luetkemeyer AF, Firnhaber C, Kendall MA, et al. Evaluation of Xpert MTB/RIF versus AFB smear and culture to identify pulmonary tuberculosis in patients with suspected tuberculosis from low and higher prevalence settings. Clin Infect Dis. 2016;62:1081–1088. doi:10.1093/cid/ciw035
   Web of Science ®Google Scholar
• Abadco DL, Steiner P. Gastric lavage is better than bronchoalveolar lavage for isolation of Mycobacterium tuberculosis in childhood pulmonary tuberculosis. Pediatr Infect Dis J. 1992;11:735–738. doi:10.1097/00006454-199209000-00013
   PubMed Web of Science ®Google Scholar
• Goussard P, Gie RP, Kling S, et al. Bronchoscopic assessment of airway involvement in children presenting with clinically significant airway obstruction due to tuberculosis. Pediatr Pulmonol. 2013;48:1000–1007. doi:10.1002/ppul.22747
   PubMed Web of Science ®Google Scholar
• Liu XH, Xia L, Song B, et al. Stool-based Xpert MTB/RIF Ultra assay as a tool for detecting pulmonary tuberculosis in children with abnormal chest imaging: a prospective cohort study. J Infect. 2021;82:84–89. doi:10.1016/j.jinf.2020.10.036
   Web of Science ®Google Scholar
• Yin QQ, Jiao WW, Han R, et al. Rapid diagnosis of childhood pulmonary tuberculosis by Xpert MTB/RIF assay using bronchoalveolar lavage fluid. Biomed Res Int. 2014;2014:310194. doi:10.1155/2014/310194
   Web of Science ®Google Scholar
• Sun L, Zhu Y, Fang M, et al. Evaluation of Xpert MTB/RIF ultra assay for diagnosis of childhood tuberculosis: a multicenter accuracy study. J Clin Microbiol. 2020;58:e00702–20. doi:10.1128/JCM.00702-20
   Web of Science ®Google Scholar
• Çakır E, Özdemir A, Daşkaya H, Umutoğlu T, Yüksel M. The value of nasopharyngeal aspirate, gastric aspirate and bronchoalveolar lavage fluid in the diagnosis of childhood tuberculosis. Turk J Pediatr. 2018;60:10–13. doi:10.24953/turkjped.2018.01.002
   Web of Science ®Google Scholar
• Sreedeep KS, Sethi S, Yadav R, et al. Loop-mediated isothermal amplification (LAMP) in the respiratory specimens for the diagnosis of pediatric pulmonary tuberculosis: a pilot study. J Infect Chemother. 2020;26:823–830. doi:10.1016/j.jiac.2020.03.019
   Web of Science ®Google Scholar
• Shete PB, Farr K, Strnad L, Gray CM, Cattamanchi A. Diagnostic accuracy of TB-LAMP for pulmonary tuberculosis: a systematic review and meta-analysis. BMC Infect Dis. 2019;19:268. doi:10.1186/s12879-019-3881-y
   PubMed Web of Science ®Google Scholar
• WHOFIND: WHO Expert Group Meeting Report Geneva. The use of a commercial loop-mediated isothermal amplification assay (TB-LAMP) for the detection of tuberculosis. WHO/HTM/TB/2013.5. 2013.
   Google Scholar
• Mitarai S, Okumura M, Toyota E. Evaluation of a simple loop-mediated isothermal amplification test kit for the diagnosis of tuberculosis. Int J Tuberc Lung Dis. 2011;15:1211–1217. doi:10.5588/ijtld.10.0629
   PubMed Web of Science ®Google Scholar
• Gelaw B, Shiferaw Y, Alemayehu M, Bashaw AA. Comparison of loop-mediated isothermal amplification assay and smear microscopy with culture for the diagnostic accuracy of tuberculosis. BMC Infect Dis. 2017;17:79. doi:10.1186/s12879-016-2140-8
   Web of Science ®Google Scholar
• Govindan SA, Yadav R, Vaidya PC, et al. Comparison of performances of loop-mediated isothermal amplification, XPERT MTB/RIF and BACTEC MGIT in the diagnosis of childhood tuberculosis. J Paediatr Child Health. 2021;57:847–853. doi:10.1111/jpc.15334
   Web of Science ®Google Scholar
• Wang X, Wang G, Wang Y, et al. Development and preliminary application of multiplex loop-mediated isothermal amplification coupled with lateral flow biosensor for detection of mycobacterium tuberculosis complex. Front Cell Infect Microbiol. 2021;11:666492. doi:10.3389/fcimb.2021.666492
   PubMed Web of Science ®Google Scholar
• Yadav R, Daroch P, Gupta P, Agarwal P, Aggarwal AN, Sethi S. Diagnostic accuracy of TB-LAMP assay in patients with pulmonary tuberculosis-A case-control study in northern India. Pulmonology. 2020;S2531-043730224-5. doi:10.1016/j.pulmoe.2020.10.007
   Web of Science ®Google Scholar
• Sethi S, Singh S, Dhatwalia SK, et al. Evaluation of in-house loop-mediated isothermal amplification (LAMP) assay for rapid diagnosis of M. tuberculosis in pulmonary specimens. J Clin Lab Anal. 2013;27:272–276. doi:10.1002/jcla.21596
   Web of Science ®Google Scholar
• Notomi T, Mori Y, Tomita N, Kanda H. Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects. J Microbiol. 2015;53:1–5. doi:10.1007/s12275-015-4656-9
   PubMed Web of Science ®Google Scholar
• Dorman SE, Schumacher SG, Alland D, et al. Xpert MTB/RIF ultra for detection of Mycobacterium tuberculosis and rifampicin resistance: a prospective multicentre diagnostic accuracy study. Lancet Infect Dis. 2018;18:76–84. doi:10.1016/S1473-3099(17)30691-6
   PubMed Web of Science ®Google Scholar
• Moore DP, Higdon MM, Hammitt LL, et al. The incremental value of repeated induced sputum and gastric aspirate samples for the diagnosis of pulmonary tuberculosis in young children with acute community-acquired pneumonia. Clin Infect Dis. 2017;64(suppl_3):S309–S316. doi:10.1093/cid/cix099
   Web of Science ®Google Scholar