658
Views
8
CrossRef citations to date
0
Altmetric
ORIGINAL RESEARCH

Prevalence of CRISPR-Cas Systems and Their Possible Association with Antibiotic Resistance in Enterococcus faecalis and Enterococcus faecium Collected from Hospital Wastewater

, , , , , & ORCID Icon show all
Pages 1143-1154 | Published online: 19 Mar 2022

References

  • Chia PY, Sengupta S, Kukreja A, Ponnampalavanar SS, Ng OT, Marimuthu K. The role of hospital environment in transmissions of multidrug-resistant gram-negative organisms. Antimicrob Resist Infect Control. 2020;9(1):29. doi:10.1186/s13756-020-0685-1
  • Gouliouris T, Raven KE, Moradigaravand D, et al. Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment. Genome Res. 2019;29(4):626–634. doi:10.1101/gr.232629.117
  • Kraemer SA, Ramachandran A, Perron GG. Antibiotic pollution in the environment: from microbial ecology to public policy. Microorganisms. 2019;7(6):180. doi:10.3390/microorganisms7060180
  • Růžičková M, Vítězová M, Kushkevych I. The characterization of Enterococcus genus: resistance mechanisms and inflammatory bowel disease. Open Med. 2020;15(1):211–224. doi:10.1515/med-2020-0032
  • Remschmidt C, Schröder C, Behnke M, Gastmeier P, Geffers C, Kramer TS. Continuous increase of vancomycin resistance in enterococci causing nosocomial infections in Germany− 10 years of surveillance. Antimicrob Resist Infect Control. 2018;7(1):1–7. doi:10.1186/s13756-018-0353-x
  • Boccella M, Santella B, Pagliano P, et al. Prevalence and antimicrobial resistance of Enterococcus species: a retrospective cohort study in Italy. Antibiotics. 2021;10(12):1552. doi:10.3390/antibiotics10121552
  • Ramos S, Silva V, Dapkevicius MD, Igrejas G, Poeta P. Enterococci, from harmless bacteria to a pathogen. Microorganisms. 2020;8(8):1118. doi:10.3390/microorganisms8081118
  • García-Solache M, Rice LB. The Enterococcus: a model of adaptability to its environment. Clin Microbiol Rev. 2019;32(2):e00058–18. doi:10.1128/CMR.00058-18
  • Shabbir MA, Wu Q, Shabbir MZ, et al. The CRISPR- cas system promotes antimicrobial resistance in Campylobacter jejuni. Fut Microbiol. 2018;13(16):1757–1774. doi:10.2217/fmb-2018-0234
  • Kamruzzaman M, Iredell J. CRISPR-Cas system in antibiotic resistance plasmids in Klebsiella pneumoniae. Front Microbiol. 2020;10:2934. doi:10.3389/fmicb.2019.02934
  • Gholizadeh P, Aghazadeh M, Ghotaslou R, et al. CRISPR-cas system in the acquisition of virulence genes in dental-root canal and hospital-acquired isolates of Enterococcus faecalis. Virulence. 2020;11(1):1257–1267. doi:10.1080/21505594.2020.1809329
  • Gholizadeh P, Köse Ş, Dao S, et al. How CRISPR-Cas system could be used to combat antimicrobial resistance. Infect Drug Resist. 2020;13:1111–1121. doi:10.2147/IDR.S247271
  • Wang G, Song G, Xu Y. Association of CRISPR/Cas system with the drug resistance in Klebsiella pneumoniae. Infect Drug Resist. 2020;13:1929. doi:10.2147/IDR.S253380
  • Dos Santos BA, de Oliveira JD, Parmanhani-da-silva BM, Ribeiro RL, Teixeira LM, Neves FP. CRISPR elements and their association with antimicrobial resistance and virulence genes among vancomycin-resistant and vancomycin-susceptible enterococci recovered from human and food sources. Infect Genet Evol. 2020;80:104183. doi:10.1016/j.meegid.2020.104183
  • Ahmed ES, El-Tahan MH, Khalafall GM, Sedik MZ. Physico-chemical and microbial profile of agriculture wastewater samples from El Maryotia canal in Egypt. Plant Arch. 2021;21(1):650–657. doi:10.51470/PLANTARCHIVES.2021.v21.S1.099
  • Mariam SH. A sampling survey of enterococci within pasteurized, fermented dairy products and their virulence and antibiotic resistance properties. PLoS One. 2021;16(7):e0254390. doi:10.1371/journal.pone.0254390
  • Iweriebor BC, Obi LC, Okoh AI. Virulence and antimicrobial resistance factors of Enterococcusspp. isolated from fecal samples from piggery farms in Eastern Cape, South Africa. BMC Microbiol. 2015;15(1):136. doi:10.1186/s12866-015-0468-7
  • CLSI. Performance Standards for Antimicrobial Susceptibility Testing. 28th ed. CLSI supplement M100. Wayne, PA: Clinical and Laboratory Standards Institute; 2018
  • The European Committee on Antimicrobial Susceptibility Testing. Breakpoint tables for interpretation of MICs and zone diameters, version 8.1; 2018.
  • Gotkowska-Płachta A. The prevalence of virulent and multidrug-resistant enterococci in river water and in treated and untreated municipal and hospital wastewater. Int J Environ Res Public Health. 2021;18(2):563. doi:10.3390/ijerph18020563
  • Molale-Tom LG, Bezuidenhout CC. Prevalence, antibiotic resistance and virulence of Enterococcus spp. from wastewater treatment plant effluent and receiving waters in South Africa. J Water Health. 2020;18(5):753–765. doi:10.2166/wh.2020.086
  • Iweriebor BC, Gaqavu S, Obi LC, Nwodo UU, Okoh AI. Antibiotic susceptibilities of enterococcus species isolated from hospital and domestic wastewater effluents in Alice, eastern cape province of South Africa. Int J Environ Res Public Health. 2015;12(4):4231–4246. doi:10.3390/ijerph120404231
  • Matlou DP, Bissong ME, Tchatchouang CD, et al. Virulence profiles of vancomycin-resistant enterococci isolated from surface and ground water utilized by humans in the North West Province, South Africa: a public health perspective. Environ Sci Pollut Res. 2019;26(15):15105–15114. doi:10.1007/s11356-019-04836-5
  • Oravcova V, Mihalcin M, Zakova J, Pospisilova L, Masarikova M, Literak I. Vancomycin-resistant enterococci with vanA gene in treated municipal wastewater and their association with human hospital strains. Sci Total Environ. 2017;609:633–643. doi:10.1016/j.scitotenv.2017.07.121
  • Karimi F, Samarghandi MR, Shokoohi R, Godini K, Arabestani MR. Prevalence and removal efficiency of enterococcal species and vancomycin-resistant enterococci of a hospital wastewater treatment plant. Avicenna J Environ Health Eng. 2016;3(2):e8623. doi:10.5812/ajehe.8623
  • Mbanga J, Abia AL, Amoako DG, Essack SY. Longitudinal surveillance of antibiotic resistance in Escherichia coli and Enterococcus spp. from a wastewater treatment plant and its associated waters in KwaZulu-Natal, South Africa. Microb Drug Resist. 2021;27(7):904–918. doi:10.1089/mdr.2020.0380
  • George SK, Suseela MR, El Safi S, et al. Molecular determination of van genes among clinical isolates of enterococci at a hospital setting. Saudi J Biol Sci. 2021;28(5):2895–2899. doi:10.1016/j.sjbs.2021.02.022
  • Rehman M, Hasan KA, Bin-Asif H, et al. Differentiating Enterococcus lineages in combined sewer overflow and potable water combating to hospital acquired high-level β-lactam resistance. Environ Challenges. 2021;4:100094. doi:10.1016/j.envc.2021.100094
  • Huescas CGY, Pereira RI, Prichula J, Azevedo PA, Frazzon J, Frazzon APG. Frequency of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) in non-clinical Enterococcus faecalis and Enterococcus faecium strains. Braz J Biol. 2019;79(3):460–465. doi:10.1590/1519-6984.183375
  • Sanderson H, Ortega-Polo R, Zaheer R, et al. Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants. BMC Microbiol. 2020;20(1):1–7. doi:10.1186/s12866-019-1683-4
  • Lyons C, Raustad N, Bustos MA, Shiaris M. Incidence of type II CRISPR1-Cas systems in Enterococcus is species-dependent. PLoS One. 2015;10(11):e0143544. doi:10.1371/journal.pone.0143544
  • Gholizadeh P, Aghazadeh M, Ghotaslou R, et al. Role of CRISPR-Cas system on antibiotic resistance patterns of Enterococcus faecalis. Ann Clin Microbiol Antimicrob. 2021;20(1):49. doi:10.1186/s12941-021-00455-6
  • Palmer KL, Gilmore MS. Multidrug-resistant enterococci lack CRISPR-cas. MBio. 2010;1(4):e00227–00210. doi:10.1128/mBio.00227-10
  • Burley KM, Sedgley CM. CRISPR-Cas, a prokaryotic adaptive immune system, in endodontic, oral, and multidrug-resistant hospital-acquired Enterococcus faecalis. J Endod. 2012;38(11):1511–1515. doi:10.1016/j.joen.2012.07.004
  • Mackow NA, Shen J, Adnan M, Khan AS, Fries BC, Diago-Navarro E. CRISPR-Cas influences the acquisition of antibiotic resistance in Klebsiella pneumoniae. PLoS One. 2019;14(11):e0225131. doi:10.1371/journal.pone.0225131
  • Aydin S, Personne Y, Newire E, et al. Presence of Type IF CRISPR/Cas systems is associated with antimicrobial susceptibility in Escherichia coli. J Antimicrob Chemother. 2017;72(8):2213–2218. doi:10.1093/jac/dkx137
  • Ren L, Deng LH, Zhang RP, et al. Relationship between drug resistance and the clustered, regularly interspaced, short, palindromic repeat-associated protein genes cas1 and cas2 in Shigella from giant panda dung. Medicine. 2017;96(7):e5922. doi:10.1097/MD.0000000000005922