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Original Research

Comparative functional dynamics studies on the enzyme nano-bio interface

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Pages 4523-4536 | Published online: 08 Aug 2018

References

  • XiaXRMonteiro-RiviereNARiviereJEAn index for characterization of nanomaterials in biological systemsNat Nanotechnol20105967167520711178
  • XuMLiJIwaiHFormation of nano-bio-complex as nanomaterials dispersed in a biological solution for understanding nanobiological interactionsSci Rep2012240622586516
  • YuYWangJLiuJLingDXiaJFunctional assembly of protein fragments induced by spatial confinementPLoS One2015104e012210125875003
  • HsuCYChenCWYuHPLinYFLaiPSBioluminescence resonance energy transfer using luciferase-immobilized quantum dots for self-illuminated photodynamic therapyBiomaterials20133441204121223069718
  • LimJHParkGCLeeSMSurface-tunable bioluminescence resonance energy transfer via geometry-controlled ZnO nanorod coordinationSmall201511283469347525802061
  • ForoozandehPAzizAAMerging worlds of nanomaterials and biological environment: factors governing protein corona formation on nanoparticles and its biological consequencesNanoscale Res Lett20151022125995715
  • MariamJSivakamiSDongrePMAlbumin corona on nanoparticles – a strategic approach in drug deliveryDrug Deliv20162382668267626056719
  • MoonSHChoiWJChoiSWAnti-cancer activity of ZnO chips by sustained zinc ion releaseToxicol Rep2016343043828959565
  • MishraPKMishraHEkielskiATalegaonkarSVaidyaBZinc oxide nanoparticles: a promising nanomaterial for biomedical applicationsDrug Discov Today201722121825183428847758
  • DeLongRKMitchellJAMorrisRTEnzyme and cancer cell selectivity of nanoparticles: inhibition of 3-D metastatic phenotype and experimental melanoma by zinc oxideJ Biomed Nanotechnol201713222123129377653
  • ChaSHHongJMcGuffieMYeomBVanEppsJSKotovNAShape-dependent biomimetic inhibition of enzyme by nanoparticles and their antibacterial activityACS Nano2015999097910526325486
  • LinYGHsuYKChenSYLinYKChenLCChenKHNanostruc-tured zinc oxide nanorods with copper nanoparticles as a microreformation catalystAngew Chem Int Ed Engl200948417586759019739158
  • NasseriMAKamaliFZakerinasBCatalytic activity of reusable nickel oxide nanoparticles in the synthesis of spirooxindolesRSC Adv201552651726520
  • GangulyATrinhPRamanujacharyKVAhmadTMugweruAGanguliAKReverse micellar based synthesis of ultrafine MgO nanoparticles (8–10 nm): characterization and catalytic propertiesJ Colloid Interface Sci2011353113714220934186
  • BhogaleAPatelNMariamJDongrePMMiotelloAKothariDCComprehensive studies on the interaction of copper nanoparticles with bovine serum albumin using various spectroscopiesColloids Surf B Biointerfaces201411327628424121071
  • BhogaleAPatelNSarpotdarPSystematic investigation on the interaction of bovine serum albumin with ZnO nanoparticles using fluorescence spectroscopyColloids Surf B Biointerfaces201310225726423010116
  • Simón-VázquezRLozano-FernándezTPeleteiro-OlmedoMGonzález-FernándezAConformational changes in human plasma proteins induced by metal oxide nanoparticlesColloids Surf B Bioint-erfaces2014113198206
  • GannHGlaspellGGarradRInteraction of MnO and ZnO nanomaterials with biomedically important proteins and cellsJ Biomed Nanotechnol201061374220499830
  • YangQLiangJHanHProbing the interaction of magnetic iron oxide nanoparticles with bovine serum albumin by spectroscopic techniquesJ Phys Chem B200911330104541045819583232
  • DembereldorjUGanboldEOSeoJHLeeSYYangSIJooSWConformational changes of proteins adsorbed onto ZnO nanoparticle surfaces investigated by concentration-dependent infrared spectroscopyVib Spectrosc2012592328
  • KatzensteinGEVronaSAWechslerRJSteadmanBLLewisRVMiddaughCRRole of conformational changes in the elution of proteins from reversed-phase HPLC columnsProc Natl Acad Sci U S A19868312426842723459173
  • UgarovaNNBrovkoLYProtein structure and bioluminescent spectra for firefly bioluminescenceLuminescence200217532133012407671
  • ContiEFranksNPBrickPCrystal structure of firefly luciferase throws light on a superfamily of adenylate-forming enzymesStructure1996432872988805533
  • MortazaviMHosseinkhaniSDesign of thermostable luciferases through arginine saturation in solvent-exposed loopsProtein Eng Des Sel2011241289390322068960
  • BranchiniBRSouthworthTLMurtiashawMHBoijeHFleetSEA mutagenesis study of the putative luciferin binding site residues of firefly luciferaseBiochemistry20034235104291043612950169
  • BranchiniBRMagyarRAMurtiashawMHPortierNCThe role of active site residue arginine 218 in firefly luciferase bioluminescenceBiochemistry20014082410241811327861
  • DementievaEIFedorchukEABrovkoLYSavitskiiAPUgarovaNNFluorescent properties of firefly luciferases and their complexes with luciferinBiosci Rep2000201213010888408
  • Amini-BayatZHosseinkhaniSJafariRKhajehKRelationship between stability and flexibility in the most flexible region of Photinus pyralis luciferaseBiochim Biophys Acta20121824235035822155276
  • VoeikovVLYablonskayaOIStabilizing effects of hydrated fullerenes C60 in a wide range of concentrations on luciferase, alkaline phosphatase, and peroxidase in vitroElectromagn Biol Med201534216016626098530
  • BarberSAbdelhakiemMGhoshKEffects of nanomaterials on luciferase with significant protection and increased enzyme activity observed for zinc oxide nanomaterialsJ Nanosci Nanotechnol20111112103091031922408903
  • ChakrabortiSChatterjeeTJoshiPStructure and activity of lysozyme on binding to ZnO nanoparticlesLangmuir20102653506351320000758
  • KäkinenADingFChenPMortimerMKahruAKePCInteraction of firefly luciferase and silver nanoparticles and its impact on enzyme activityNanotechnology2013243434510123899823
  • AlamRKaramLMDoaneTLNear infrared bioluminescence resonance energy transfer from firefly luciferase – quantum dot bio-nanoconjugatesNanotechnology2014254949560625414169
  • LimJHParkGCLeeSMSurface-tunable bioluminescence resonance energy transfer via geometry-controlled ZnO nanorod coordinationSmall201511283469347525802061
  • VasquezESFeugangJMWillardSTRyanPLWaltersKBBio-luminescent magnetic nanoparticles as potential imaging agents for mammalian spermatozoaJ Nanobiotechnology2016142026984640
  • DelongRKHurstMNAryalSInchunNKUnique boron carbide nanoparticle nanobio interface: effects on protein-RNA interactions and 3-D spheroid metastatic phenotypeAnticancer Res20163652097210327127109
  • GhisaidoobeABChungSJIntrinsic tryptophan fluorescence in the detection and analysis of proteins: a focus on Förster resonance energy transfer techniquesInt J Mol Sci20141512225182253825490136
  • TsonevLIHirshAGFluorescence ratio intrinsic basis states analysis: a novel approach to monitor and analyze protein unfolding by fluorescenceJ Biochem Biophys Methods200045112110899387
  • HurstMNDeLongRKTwo-dimensional fluorescence difference spectroscopy to characterize nanoparticles and their interactionsSci Rep201663328727624316
  • FannesTVandermarliereESchietgatLDegroeveSMartensLRamonJPredicting tryptic cleavage from proteomics data using decision tree ensemblesJ Proteome Res20131252253225923517142
  • SaliABlundellTLComparative protein modelling by satisfaction of spatial restraintsJ Mol Biol199323437798158254673
  • LobleyAWhitmoreLWallaceBADICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectraBioinformatics200218121121211836237
  • WhitmoreLWallaceBADICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic dataNucleic Acids Res200432W668W67315215473
  • WhitmoreLWallaceBAProtein secondary structure analyses from circular dichroism spectroscopy: methods and reference databasesBiopolymers200889539240017896349
  • MedberryPDennisSVan HeckeTDeLongRKpDNA bioparticles: comparative heterogeneity, surface, binding, and activity analysesBiochem Biophys Res Commun2004319242643215178424
  • BranchiniBRMagyarRAMurtiashawMHAndersonSMHelgersonLCZimmerMSite-directed mutagenesis of firefly luciferase active site amino acids: a proposed model for bioluminescence colorBiochemistry19993840132231323010529195