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Articles

Phenotypic and genetic structure of interbreeding populations of the diatom Tabularia fasciculata (Bacillariophyta)

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Pages 391-403 | Received 23 Sep 2008, Accepted 11 Mar 2009, Published online: 22 Apr 2019

REFERENCES

  • Amato A., Kooistra W.H.C.F., Ghiron J.H.L., Mann D.G., Pröschold T. & Montresor M. 2007. Reproductive isolation among sympatric cryptic species in marine diatoms. Protist 158: 193–207.
  • Andersen R.A. 2005. Algal culturing techniques. Elsevier Academic Press, Amsterdam. 578 pp.
  • Archibald R.E.M. 1983. The diatoms of the Sundays and Great Fish Rivers in the Eastern Cape province of South Africa. Cramer, Vaduz, Leichtenstein. 431 pp.
  • Behnke A., Friedl T., Chepurnov V.A. & Mann D.G. 2004. Reproductive compatibility and rDNA sequence analysis in the Sellaphora pupula species complex (Bacillariophyta). Journal of Phycology 40: 193–208.
  • Beszteri B., Ács É. & Medlin L.K. 2005. Ribosomal DNA sequence variation among sympatric strains of the Cyclotella meneghiniana complex (Bacillariophyceae) reveals cryptic diversity. Protist 156: 317–333.
  • Casteleyn G., Chepurnov V., Leliaert F., Mann D.G., Bates S.S., Lundholm N., Rhodes L., Sabbe K. & Vyverman W. 2008. Pseudo-nitzschia pungens (Bacillariophyceae): a cosmopolitan species? Harmful Algae 7: 241–257.
  • Cerino F., Orsini L., Sarno D., Dell'Aversano C., Tartaglione L. & Zingone A. 2005. The alternation of different morphotypes in the seasonal cycle of the toxic diatoms Pseudonitzschia galaxiae. Harmful Algae 4: 33–48.
  • Coleman A.W. 2007. Pan-eukaryote ITS2 homologies revealed by RNA secondary structure. Nucleic Acids Research 35: 3322–3329.
  • Coleman A.W. 2008. Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide. Molecular Phylogenetics and Evolution 160: 9–20. DOI: 10.1016/j.ympev.2008.10.008.
  • Cox E.J. 1995. Morphological variation in widely distributed diatom taxa: taxonomic and ecological implications. In: Proceedings of the 13th International Diatom Symposium (Ed. by D.R. Marino & M. Montresor), pp. 335–345. Biopress Ltd., Bristol, UK.
  • D'Alelio D., Amato A., Kooistra W.H.C.F., Procaccini G., Casotti R. & Montresor M. 2008. Internal transcribed spacer polymorphism in Pseudo-nitzschia multistriata (Bacillariophyceae) in the Gulf of Naples: recent divergence or intraspecific hybridization? Protist. DOI:10.1016/j.protis.2008.07.001.
  • Davidovich N.A., Kaczmarska I. & Ehrman J.M. 2006. The sexual structure of a natural population of the diatom Nitzschia longissima (Bréb.) Ralfs. In: Proceedings of the 18th International Diatom Symposium (Ed. by A. Witkowski), pp. 27–40. Biopress Ltd., Bristol, UK.
  • Droop S.J.M., Mann D.G. & Lokhorst G.M. 2000. Spatial and temporal stability of demes in D. smithii/D. fusca (Bacillariophyta) supports a narrow species concept. Phycologia 39: 527–546.
  • Evans K.M., Wortley A.H., Simpson G.E., Chepurnov V.A. & Mann D.G. 2008. A molecular systematic approach to explore diversity within the Sellaphora pupula species complex (Bacillariophyta). Journal of Phycology 44: 215–231.
  • Feliner G.N. & Rosselló J.A. 2007. Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants. Molecular Phylogenetics and Evolution 44: 911–919.
  • Hall T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95–98.
  • Hiltz M., Bates S.S. & Kaczmarska I. 2000. Effect of light: dark cycles and cell apical length on the sexual reproduction of the pennate diatom Pseudo-nitzschia multiseries (Bacillariophyceae) in culture. Phycologia 39: 59–66.
  • Holmes R.W. & Croll D.A. 1984. Initial observations on the composition of dense diatom growth on the body feathers of three species of diving seabirds. In: Proceedings of the 7th International Diatom Symposium (Ed. by D.G. Mann), pp. 265–278. O. Koeltz, Koeningstein, Germany.
  • Hürliman J. & Straub F. 1991. Morphologische und ökologische characterisierung von Sippen um den Fragilaria capucina-komplex sensu Lange-Bertalot 1980. Diatom Research 6: 21–47.
  • Hustedt F. 1930. Die Kieselalgen, 2. Teil. Translated by N. Jensen, 1985. The pennate diatoms: a translation of Die Kieselalgen, 2. Tiel (with supplement). Koeltz Scientific Books, Koenigstein, Germany. 918 pp.
  • Kaczmarska I., Legresley M.M., Martin J.L. & Ehrman J.M. 2005. Diversity of the diatom genus Pseudo-nitzschia Peragallo in the Quoddy Region of the Bay of Fundy, Canada. Harmful Algae 4: 1–19.
  • Kaczmarska I., Reid C., Martin J.L. & Moniz M.B.J. 2008. Morphological, biological, and molecular characteristics of the diatom Pseudo-nitzschia delicatissima from the Canadian Maritimes. Botany 86: 763–772.
  • Lewis R.J., Jensen S.I., Denicola D.M., Miller V.I., Hoagland K.D. & Ernst S.G. 1997. Genetic variations in the diatom Fragilaria capucina (Fragilariaceae) along a latitudinal gradient across North America. Plant Systematics and Evolution 204: 99–108.
  • Lundholm N., Daugbjerg N. & Moestrup Ø. 2002. Phylogeny of the Bacillariaceae with emphasis on the genus Pseudo-nitzschia (Bacillariophyta) based on partial LSU rDNA. European Journal of Phycology 37: 115–134.
  • Lundholm N., Moestrup Ø., Hasle G.R. & Hoef-Emden K. 2003. A study of the Pseudo-nitzschia pseudodelicatissima/cuspidata complex (Bacillariophyta): what is P. pseudodelicatissima? Journal of Phycology 39: 797–813.
  • Lundholm N., Moestrup Ø., Kotaki Y., Hoef-Emden K., Scholin C. & Miller P. 2006. Inter-and intraspecific variation of the Pseudo-nitzschia delicatissima complex (Bacillariophyceae) illustrated by rRNA probes, morphological data and phylogenetic analyses. Journal of Phycology 42: 464–481.
  • Mann D.G. 1999. The species concept in diatoms. Phycologia 38: 437–495.
  • Mann D.G., McDonald S.M., Bayer M.M., Droop S.J.M., Chepurnov V.A., Loke R.E., Ciobanu A. & du Bup, J.M.H. 2004. The Sellaphora pupula species complex (Bacillariophyceae): morphometric analysis, ultrastructure and mating data provide evidence for five new species. Phycologia 43: 459–482.
  • Medlin L., Jung I., Bahulikar R., Mendgen K., Kroth P. & Kooistra W.H.C.F. 2008. Evolution of the diatoms. VI. Assessment of the new genera in the araphids using molecular data. Nova Hedwigia, Beihefte 133: 81–100.
  • Moniz M.B.J. & Kaczmarska I. In press. Barcoding diatoms: is there a good marker? Molecular Ecology Resources, Special Barcoding Issue.
  • Müller T., Philippi N., Dandekar T., Schultz J. & Wolf M. 2008. Distinguishing species. RNA 13: 1469–1472.
  • Murphy L.S. & Guillard R.R.L. 1976. Biochemical taxonomy of marine phytoplankton by electrophoresis of enzymes. I. The centric diatoms Thalassiosira pseudonana and T. fluviatilis. Journal of Phycology 12: 9–13.
  • Patrick R. & Reimer C.W. 1966. The diatoms of the United States. Monographs of the Academy of Natural Sciences of Philadelphia 1: 1–688.
  • Posada D. & Crandall K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817–818.
  • Roshchin A.M. 1994. Zhiznennye tsikly diatomovikh vodoroslej. Naukova Dumka, Kiev. 170 pp.
  • Round F.E., Crawford R.M. & Mann D.G. 1990. The diatoms. The biology and morphology of the genera. Cambridge University Press, Cambridge, UK. 747 pp.
  • Rynearson T.A., Lin E.O. & Armbrust E.V. 2008. Metapopulation structure in the planktonic diatom Ditylum brightwellii (Bacillariophyceae). Protist 160: 111–121. DOI: 10.1016/j.protis.2008.10.003.
  • Sarno D., Kooistra W.H.C.F., Medlin L.K., Percopo I. & Zingone A. 2005. Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species. Journal of Phycology 41: 151–176.
  • Schmid A.M.M. 1980. Valve morphogenesis in diatoms: a patternrelated filamentous system in pennates and the effect of APM, colchicine and osmotic pressure. Nova Hedwigia 33: 811–847.
  • Schmid A.M.M. 1997. Intraclonal variation of the tripolar pennate diatom “Centronella reicheltii” in culture: strategies of reversion to the bipolar Fragilaria-form. Nova Hedwigia 65: 27–45.
  • Snoeijs P. 1992. Studies in the Tabularia fasciculata complex. Diatom Research 7: 313–344.
  • Stachura-Suchoples K. 2006. Morphological variability of recent population of Plioceanicus costatus sensu lato from Verhojansk Mountains, and its relationship to Pliocenicus costatus var. costatus (Log., Lupik. & Khurs.) Flower, Ozarina et Kuzmina. In: Proceedings of the 18th International Diatom Symposium (Ed. by A. Witkowski), pp. 371–387. Biopress Ltd., Bristol, UK.
  • Stoermer E.F. & Ladewski T.B. 1982. Quantitative analysis of shape variation in type and modern populations of Gomphoneis herculeana. Nova Hedwiga, Beihefte 73: 347–386.
  • Swofford D.L. 2002. PAUP* - Phylogenetic Analysis Using Parsimony (* and other methods). Version 4.0b10. Sinauer Associates Inc, Sunderland, MA, USA.
  • Syvertsen E.E. 1977. Thalassiosira rotula and T. gravida: ecology and morphology. Nova Hedwigia, Beihefte 54: 99–112.
  • Thompson J.D., Higgins D.G. & Gibson T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple alignment through sequence weighing, position specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673–4680.
  • Thornhill D.J., Lajeunesse T.C. & Santos S.R. 2007. Measuring rDNA diversity in eukaryotic microbial systems: how intragenomic variation, pseudogenes, and PCR artifacts confound biodiversity estimates. Molecular Ecology 16: 5326–5340.
  • Torgan L.C., Vieira A.A.H., Giroldo D. & Santos C.B. 2006. Morphological irregularity and small cell size in Thalassiosira duostra maintained in culture. In: Proceedings of the 18th International Diatom Symposium (Ed. by A. Witkowski), pp. 407–416. Biopress Ltd., Bristol, UK.
  • Underhill P.A. 1977. Nitrate uptake kinetics and clonal variability in the neritic diatom Biddulphia aurita. Journal of Phycology 13: 170–176.
  • Vanormelingen P., Chepurnov V.A., Mann D.G., Cousin S. & Vyverman W. 2007. Congruence of morphological, reproductive and ITS rDNA sequence data in some Autralasian Eunotia bilunaris (Bacillariophyta). European Journal of Phycology 42: 61–79.
  • Vanormelingen P., Chepurnov V.A., Mann D.G., Sabbe K. & Vyverman W. 2008. Genetic divergence and reproductive barriers among morphologically heterogeneous sympatric clones of Eunotia bilunaris sensu lato (Bacillariophyta). Protist 159: 73–90.
  • White T.J., Bruns T.D., Lee S.B. & Taylor J.W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications (Ed. by M.A. Innis, D.H. Gelfand, J.J. Sninsky & T.J. White), pp. 315–322. Academic Press, London.
  • Williams D.M. & Round F.E. 1986. Revision of the genus Synedra Ehrenb. Diatom 1: 313–339.
  • Wood A.M., Lande R. & Fryxell G.A. 1987. Quantitative genetic analysis of morphological variation in an Antarctic diatom grown at two light intensities. Journal of Phycology 23: 42–54.

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