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Articles

Fucales (Phaeophyceae) from Spain characterized by large-scale discontinuous nuclear DNA contents consistent with ancestral cryptopolyploidy

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Pages 64-72 | Received 18 Feb 2009, Accepted 06 Jul 2009, Published online: 27 Mar 2019

REFERENCES

  • Bell G. 1997. The evolution of the life cycle of brown seaweeds. Biological Journal of the Linnean Society 60: 21–38.
  • Bennetzen J.L. 2002. Mechanisms and rates of genome expansion and contraction in flowering plants. Genetica 115: 29–36.
  • Bennetzen J.L. & Kellogg E.A. 1997. Do plants have a one-way ticket to genomic obesity? The Plant Cell 9: 1509–1514.
  • Chen Z.J. 2007. Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids. Annual Review in Plant Biology 58: 377–406.
  • Cho G.Y., Rousseau F., De Reviers B. & Boo S.M. 2006. Phylogenetic relationships within the Fucales (Phaeophyceae) assessed by the photosystem I coding psaA sequences. Phycologia 45: 512–519.
  • Choi H.G., Lee Y.K. & Lee I.K. 1994. Measurement of DAPI-stained DNA in Dasysiphonia chejuensis Lee et West (Rhodophyta) by a Video Interfaced Digital Image processor. The Korean Journal of Phycology 9: 21–28.
  • Clayton M.N. 1984. Evolution of the Phaeophyta with particular reference to the Fucales. In: Progress in phycological research, vol. 3 (Ed. by F.E. Round & D.J. Chapman), pp. 11–46. Biopress, Bristol, UK.
  • Clayton M.N. 1988. Evolution and life histories of brown algae. Botanica Marina 31: 379–387.
  • Clayton M.N. 1994. Circumscription and phylogenetic relationships of the Southern Hemisphere family Seirococcaceae. Botanica Marina 37: 213–220.
  • Clowes A.W., Reidy M.A. & Clowes M.M. 1983. Kinetics of cellular proliferation after arterial injury. I. Smooth muscle growth in absence of endothelium. Laboratory Investigations 49: 327–333.
  • Cole K. 1967. Chromosome numbers in the Phaeophyceae. Canadian Journal of Genetics and Cytology 9: 519–530.
  • Coleman A.W., Maguire M.J. & Coleman J.R. 1981. Mithramycin-and 4'-6 diamidino-2-phenolindole (DAPI)-staining for fluorescence microspectrophotometric measurement of DNA in nuclei, plastids, and virus particles. Journal of Histochemistry and Cytochemistry 29: 959–968.
  • Coyer J.A., Hoarau G., Pearson G.A., Serrao E.A., Stam W.T. & Olsen J.L. 2006a. Convergent adaptation to a marginal habitat by homoploid hybrids and polyploidy ecads in the seaweed genus Fucus. Biology Letters 2: 405–408.
  • Coyer J.A., Hoarau G., Oudot-Le Secq M.-P., Stam W.T. & Olsen J.L. 2006b. A mtDNA-based phylogeny of the brown algal genus Fucus (Heterokontophyta; Phaeophyta). Molecular Systematics and Evolution 39: 209–222.
  • Gall E.A., Asensi A., Marie D. & Kloareg B. 1996. Parthenogenesis and apospory in the Laminariales: a flow cytometry analysis. European Journal of Phycology 31: 369–380.
  • Garbary D.J. & Clarke B. 2002. Intraplant variation in nuclear DNA content in Laminaria saccharina and Alaria esculenta (Phaeophyceae). Botanica Marina 45: 211–216.
  • Goff L.J. & Coleman A.W. 1990. DNA: microspectrofluorometric studies. In: Biology of the red algae (Ed. by K.M. Cole & R.G. Sheath), pp. 43–72. Cambridge University Press, New York.
  • Gregory T.R. 2005. The C-value enigma in plants and animals: a review of parallels and an appeal for partnership. Annals of Botany 95: 133–146.
  • Gregory T.R., Nicol J.A., Tamm H., Kullman B., Kullman K., Leitch I.J., Murray B.G., Kapraun D.F., Greilhuber J. & Bennett M.D. 2007. Eukaryotic genome size databases. Nucleic Acids Research 35: D 332–338.
  • Hardie D.C., Gregory T.R. & Hebert P.D.N. 2002. From pixels to picograms: a beginners' guide to genome quantification by Feulgen image analysis densitometry. Journal of Histochemistry and Cytochemistry 50: 735–749.
  • Harvey J.B.J. & Goff L.J. 2006. A reassessment of species boundaries in Cystoseira and Halidrys (Phaeophyceae, Fucales) along the North American West Coast. Journal of Phycology 42: 707–720.
  • Horiguchi T. & Yoshida T. 1998. The phylogenetic affinities of Myagropsis myagroides (Fucales, Phaeohyceae) as determined from 18S rDNA sequences. Phycologia 37: 237–245.
  • Kapraun D.F. 1993. Karyology of marine green algae. Phycologia 32: 1–21.
  • Kapraun D.F. 1994. Cytophotometric estimation of nuclear DNA contents in thirteen species of the Caulerpales (Chlorophyta). Cryptogamic Botany 4: 410–418.
  • Kapraun D.F. 2005. Nuclear DNA content estimates in multicellular green, red and brown algae: phylogenetic considerations. Annals of Botany 95: 7–44.
  • Kapraun D.F. & Buratti J.R. 1998. Evolution of genome size in the Dasycladales (Chlorophyta) as detemined by DAPI cytometry. Phycologia 37: 176–183.
  • Kapraun D.F. & Dunwoody J.T. 2002. Relationship of nuclear genome size to some reproductive cell parameters in the Florideophycidae (Rhodophyta). Phycologia 41: 507–516.
  • Kapraun D.F. & Martin D.J. 1987. Karyological studies of three species of Codium (Codiales, Chlorophyta) from coastal North Carolina. Phycologia 26: 228–234.
  • Kapraun D.F. & Nguyen M.N. 1994. Karyology, nuclear DNA quantification and nucleus cytoplasmic domain variations in some nultinucleate green algae. Phycologia 33: 42–52.
  • Kapraun D.F., Gargiulo G.M. & Tripodi G. 1988. Nuclear DNA and karyotype variation in species of Codium (Codiales, Chlorophyta) from the North Atlantic. Phycologia 27: 273–282.
  • Kapraun D.F., Braly K. & Freshwater D.W. 2007. Nuclear DNA content variation in the freshwater red algal orders Batrachospermales and Thoreales (Florideophyceae, Nemaliophycidae). Phycologia 46: 54–62.
  • Kraan S. & Guiry M.D. 2000. Molecular and morphological character inheritance in hybrids of Alaria esculenta and A. praelonga (Alariaceae, Phaeophyceae). Phycologia 39: 554–559.
  • Leclerc M.C., Barriel V., Lecointre G. & de Reviers B. 1998. Low divergence in rDNA ITS sequences among five species of Fucus (Phaeophyceae) suggests a very recent radiation. Journal of Molecular Evolution 46: 115–120.
  • Le Gall Y., Brown S., Marie D., Mejjad M. & Kloareg B. 1993. Quantification of nuclear DNA and G-C content in marine macroalgae by flow cytometry of isolated nuclei. Protoplasma 173: 123–132.
  • Leitch A.R. & Leitch I.J. 2008. Genomic plasticity and the diversity of polyploidy plants. Science 320: 481–483.
  • Lewis R.J. 1996. Chromosomes of the brown algae. Phycologia 35: 19–40.
  • Lewis R.J., Jiang B.Y., Neushul M. & Fei X.G. 1993. Haploid parthenogenetic sporophytes of Laminaria japonica (Phaeophyceae). Journal of Phycology 29: 363–369.
  • Lynch M. & Conery J.S. 2000. The evolutionary fate and consequences of duplicate genes. Science 290: 1151–1155.
  • Marmur J. & Doty P. 1962. Determination of the base composition of desoxyribonucleic acid from its thermal denaturation temperature. Journal of Molecular Biology 5: 109–118.
  • Motomura T. 1995. Premature chromosome condensation of the karyogamy-blocked sperm pronucleus in the fertilization of Fucus distichus (Fucales, Phaeophyceae). Journal of Phycology 31: 108–113.
  • Müller D.G. 1967. Generationswechsel, Kernphasenwechsel und Sexualität der Braunalge Ectocarpus siliculosus im Kulturvernsuch. Planta 75: 39–54.
  • Müller D.G. 1970. Diploide, heterozygote Gametophyten beider Braunalgae Ectocarpus siliculosus. Naturwissenschaften 57: 357–358.
  • Olsen J.L., Stam W.T., Bot P.V.M. & van den hoek C. 1987. ScDNA-DNA hybridization studies in Pacific and Caribbean isolates of Dictyosphaeria cavernosa (Chlorophyta) indicate a long divergence. Helgoländer Meeresuntersuchungen 41: 377–383.
  • Peters A.F., Van O.M.J.H., Wiencke C., Stam W.T. & Olsen J.L. 1997. Phylogeny and historical ecology of the Desmarestiaceae (Phaeophyceae) support a Southern Hemisphere origin. Journal of Phycology 33: 294–309.
  • Peters A.F., Marie D., Scornet D., Kloareg B. & Cock J.M. 2004. Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics. Journal of Phycology 40: 1079–1088.
  • Phillips N. & Fredericq S. 2000. Biogeographic and phylogenetic investigations of the pantropical genus Sargassum (Fucales, Phaeophyceae) with respect to Gulf of Mexico species. Gulf of Mexico Science 18: 77–87.
  • Phillips N., Smith C.M. & Morden C.W. 2001. An effective DNA extraction protocol for brown algae. Phycological Research 49: 97–102.
  • Phillips N., Burrows R., Rousseau F., de Reviers B. & Saunders G.W. 2008. Resolving evolutionary relationships among the brown algae using chloroplast and nuclear genes. Journal of Phycology 44: 394–405.
  • Pichersky E. 1990. Nomad DNA — a model for movement and duplication of DNA sequences in plant genomes. Plant Molecular Biology 15: 437–448.
  • Portugal J. & Waring M. 1988. Assignment of DNA binding sites for DAPI and bisbenzimide (Hoeschst 33258). Comparative footprinting study. Biochimica et Biophysica Acta 949: 158–168.
  • Puchtler H., Waldrop F.S., Meloan S.N., Terry M.S. & Conner H.M. 1970. Methacarn (methanol-Carnoy) fixation: practical and theoretical considerations. Histochemistry and Cell Biology 21: 97–116.
  • Rousseau F. & de Reviers B. 1999a. Circumscription of the order Ectocarpales (Phaeophyceae): bibliographical synthesis and molecular evidence. Cryptogamie, Algologie 20: 5–18.
  • Rousseau F. & de Reviers B. 1999b. Phylogenetic relationships within the Fucales (Phaeophyceae) based on combined partial SSU + LSU rDNA sequence data. European Journal of Phycology 34: 53–64.
  • Rousseau F., Leclerc M.C. & de Reviers B. 1997. Molecular phylogeny of European Fucales (Phaeophyceae) based on partial large-subunit rDNA sequence comparisons. Phycologia 36: 438–446.
  • Rousseau F., Burrows R., Peters A.F., Kuhlenkamp R. & de Reviers B. 2001. A comprehensive phylogeny of the Phaeophyceae based on nrDNA sequences resolves the earliest divergences. Comptes Rendus de l'Académie des Sciences de Paris, Sciences de la Vie 324: 1–15.
  • Saunders G.W. & Kraft G.T. 1995. The phylogenetic affinities of Notheia anomala (Fucales, Phaeophyceae) as determined from partial small-subunit rRNA gene sequences. Phycologia 34: 383–389.
  • Serrão E.A., Alice L.A. & Brawley S.H. 1999. Evolution of the Fucaceae (Phaeophyceae) inferred from nrDNA-ITS. Journal of Phycology 35: 382–394.
  • Sparrow A.H. & Nauman A.F. 1973. Evolutionary changes in genome and chromosome sizes and in DNA content in the grasses. Brookhaven Symposium in Biology 25: 367–389.
  • Stam W.T., Bot P.V.M., Boele-Bos S.A., van Rooij J.M. & van den Hoek C. 1988. Single-copy DNA-DNA hybridization among five species of Laminaria (Phaeophyceae): phylogenetic and biogeographic implications. Helgoländer Meeresuntersuchungen 42: 251–267.
  • Stebbins G.L. 1971. Chromosomal evolution in higher plants. Addison-Wesley, Reading, Massachusetts, 216 pp.
  • Stiger V., Horiguchi T., Yoshida T., Coleman A. & Masuda M. 2000. Phylogenetic relationships of Sargassum (Sargassaceae, Phaeophyceae) with reference to a taxonomic revision of the section Phyllocystae based on ITS-2 nrDNA sequences. Phycological Research 48: 251–260.
  • Stiger V., Horiguchi T., Yoshida T., Coleman A.W. & Masuda M. 2003. Phylogenetic relationships within the genus Sargassum (Fucales, Phaeophyceae) inferred from ITS-2 nrDNA, with an emphasis on the taxonomic subdivision of the genus. Phycological Research 51: 1–10.
  • Susini M.L. 2006. Statut et biologie de Cystoseira amentacea var. stricta. PhD thesis. University of Nice-Sophia Antipolis. 194 pp.
  • Wenzel W. & Hemleben V. 1982. A comparative study of genomes of angiosperms. Plant Systematics and Evolution 139: 209–227.
  • Yabu H. & Yasui H. 1983. Occurrence of a tetraploid in Sargassum confusum. Japanese Journal of Phycology 31: 86–87.

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