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Articles

Proteomic analysis and qRT-PCR verification of Arthrospira platensis strain YZ under dark stress

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Pages 538-549 | Received 04 Apr 2013, Accepted 31 Jul 2013, Published online: 13 May 2019

REFERENCES

  • Adrover M.F., Muñoz M.J., Baez M.V., Thomas J., Kornblihtt A. R., Epstein A.L. & Jerusalinsky D.A. 2010. Characterization of specific cDNA background synthesis introduced by reverse transcription in RT-PCR assays. Biochimie 92: 1839–1846.
  • Agarwal R., Ortleb S., Sainis J.K. & Melzer M. 2009. Immunoelectron microscopy for locating Calvin cycle enzymes in the thylakoids of Synechocystis 6803. Molecular Plant 2: 32–42.
  • Akan P., Alexeyenko A., Costea P.I., Hedberg L., Solnestam B.W., Lundin S., Hällman J., Lundberg E., Uhlen M. & Lundeberg J. 2012. Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines. Genome Medicine 4: 86–94.
  • Akiyama S. 2012. Structural and dynamic aspects of protein clocks: how can they be so slow and stable? Cellular and Molecular Life Science 69: 2147–2160.
  • Apt K.E. & Grossman A.R. 2004. Genes encoding phycobilisome linker polypeptides on the plastid genome of Aglaothamnion neglectum (Rhodophyta). Photosynthesis Research 35: 139–216.
  • Backhausen J.E., Vetter S., Baalmann E., Kitzmann C. & Scheibe R. 1998. NAD-dependent malate dehydrogenase and glyceraldehyde 3-phosphate dehydrogenase isoenzymes play an important role in dark metabolism of various plastid types. Planta 205: 359–366.
  • Baulina O.I. 2012. Ultrastructural plasticity of cyanobacteria under dark and high light intensity conditions. Ultrastructural Plasticity of Cyanobacteria 11–63.
  • Bermúdez M.A., Páez-Ochoa M.A., Gotor C. & Romero L.C. 2010. Arabidopsis S-sulfocysteine synthase activity is essential for chloroplast function and long-day light-dependent redox control. Plant Cell 22: 403–416.
  • Bi H.G., Wang M.L., Jiang Z.S., Dong X.B. & Ai X.Z. 2011. Impacts of suboptimal temperature and low light intensity on the activities and gene expression of photosynthetic enzymes in cucumber seedling leaves. Ying Yong Sheng Tai Xue Bao 22: 2894–2900.
  • Carmo-Silva A.E., Marri L., Sparla F. & Salvucci M.E. 2011. Isolation and compositional analysis of a CP12-associated complex of calvin cycle enzymes from Nicotiana tabacum. Protein and Peptide Letters 18: 618–624.
  • Castielli O., de la Cerda B., Navarro J.A., Hervás M. & de la Rosa M.A. 2009. Proteomic analyses of the response of cyanobacteria to different stress conditions. FEBS Letters 583: 1653–1808.
  • Chen M. & Thelen J.J. 2011. Plastid uridine salvage activity is required for photoassimilate allocation and partitioning in Arabidopsis Plant Cell 23: 2991–3006.
  • Chueca A., Sahrawy M., Pagano E.A. & Corge J.L. 2002. Chloroplast fructose-1,6-bisphosphatase: structure and function. Photosynthesis Research 74: 235–249.
  • Dickson D.J. & Ely R.L. 2013. Silica sol-gel encapsulation of cyanobacteria: lessons for academic and applied research. Applied Microbiology and Biotechnology 97: 1809–1819.
  • Dressaire C., Gitton C., Loubiere P., Monnet V., Queinnec I. & Cocaign-Bousqet M. 2009. Transcriptome and proteome exploration to model translation efficiency and protein stability in Lactococcus lactis. PLoS Computational Biology 5: e1000606.
  • Fanger B.O. 1987. Adaptation of the Bradford protein assay to membrane-bound proteins by solubilizing in glucopyranoside detergents. Analytical Biochemistry 126: 11–17.
  • Foster R.G., Hankins M.W. & Peirson S.N. 2007. Light, photoreceptors, and circadian clocks. Methods in Molecular Biology 362: 3–28.
  • Fujita Y., Takagi H. & Hase T. 1998. Cloning of the gene encoding a protochlorophyllide reductase: the physiological significance of the co-existence of light-dependent and -independent protochlorophyllide reduction systems in the cyanobacterium Plectonema boryanum. Plant and Cell Physiology 39: 177–185.
  • Gao Y., Xiong W., He M.J., Tang L., Xiang J.Y. & Wu Q.Y. 2009. Action Spectra of chlorophyll a biosynthesis in cyanobacteria: dark-operative protochlorophyllide oxidoreductase-deficient mutants. Zeitschrift fur Naturforschung C-a Journal of Biosciences 64: 117–124.
  • Glick R.E., Larsson U.K. & Melis A. 1987. Differential phosphorylation of thylakoid membrane polypeptides during chloroplast adaptation to light quality. Progress in Photosynthesis Research 2: 253–256.
  • Heddad M. & Adamska I. 2002. The evolution of light stress proteins in photosynthetic organisms. Comparative and Functional Genomics 3: 504–510.
  • Heddad M., Engelken J. & Adamska I. 2012. Light stress proteins in viruses, cyanobacteria and photosynthetic eukaryota. Photosynthesis 34: 299–317.
  • Henry E.C. 2004. Handbook of microalgal culture: Biotechnology and applied phycology. Journal of Phycology 40: 1001–1002.
  • Hur Y. & Vasconcelos A.C. 1998. Spinach cytosolic fructose-1,6-bisphosphatase: II. Light effect on its expression. Molecules and Cells 8: 148–156.
  • Kehoe D.M. & Gutu A. 2006. Responding to color: the regulation of complementary chromatic adaptation. Annual Review of Plant Biology 57: 127–150.
  • Kim E.K., Choi G.G., Kim H.S., Ahn C.Y. & Oh H.M. 2012. Increasing γ-linolenic acid content in Spirulina platensis using fatty acid supplement and light-dark illumination. Journal of Applied Phycology 24: 743–750.
  • Kim J.H. & Suh K.H. 2005. Light-dependent expression of superoxide dismutase from cyanobacterium Synechocystis sp. strain PCC 6803. Archives Microbiology 183: 218–223.
  • Kim Y.I., Vinvard D.J., Ananyev G.M., Dismukes G.C. & Golden S.S. 2012. Oxidized quinones signal onset of darkness directly to the cyanobacterial circadianoscillator. Proceedings of the National Academy of Science of the United States of America 109: 17765–17769.
  • Kogovsek P., Gow L., Pompe-Novak M., Gruden K., Foster G.D., Boonham N. & Ravnikar M. 2009. Single-step RT-PCR for sensitive detection and discrimination of Potato virus Y isolates. Scientia Horticulturae 149: 1–11.
  • Kumar D.P. & Murthy S.D. 2007. Photoinhibition induced alterations in energy transfer process in phycobilisomes of PS II in the cyanobacterium, Spirulina platensis. Journal of Biochemistry and Molecular Biology 40: 644–648.
  • Lee S.W. & Hahn T.R. 2002. Two light-responsive elements of pea chloroplastic fructose-1,6-bisphosphatase gene involved in the red-light-specific gene expression in transgenic tobaccos. Biochimica et Biophysica Acta 1579: 8–17.
  • Lee S.W. & Hahn T.R. 2003. Light-regulated differential expression of pea chloroplast and cytosolic fructose-1, 6-bisphosphatases. Plant Cell Reports 21: 611–618.
  • Lemaire S.D., Stein M., Issakidis-Bourguet E., Keryer E., Bernoit V.V., Pineau B., Gerard-Hirne C., Miginiac-Maslow M. & Jacquot J.P. 1999. The complex regulation of ferredoxin/thioredoxin-related genes by light and the circadian clock. Planta 209: 221–229.
  • Leong T.Y. & Anderson J.M. 1984. Adaptation of the thylakoid membranes of pea chloroplasts to light intensities. II. Regulation of electron transport capacities, electron carriers, coupling factor (CF1) activity and rates of photosynthesis. Photosynthesis Research 5: 117–128.
  • Lindberg P., Park S. & Melis A. 2010. Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism. Metabolic Engineering 12: 70–79.
  • Liu L.N., Chen X.L., Zhang Y.Z. & Zhou B.C. 2005. Characterization, structure and function of linker polypeptides in phycobilisomes of cyanobacteria and red algae: an overview. Biochimica et Biophysica Acta 1708: 133–142.
  • Mihalcescu I., Hsing W. & Leibler S. 2004. Resilient circadian oscillator revealed in individual cyanobacteria. Nature 430: 81–85.
  • Naguib F.N.M., Soong S.J. & el Kouni M.H. 1993. Circadian rhythm of orotate phosphoribosyltransferase, pyrimidine nucleoside phosphorylases and dihydrouracil dehydrogenase in mouse liver. Possible relevance to chemotherapy with 5-fluoropyrimidines. Biochemical Pharmacology 45: 667–673.
  • Pearse J.S. & Bosch I. 2002. Photoperiodic regulation of gametogenesis in the Antarctic sea star Odontaster validus Koehler: evidence for a circannual rhythm modulated by light. Invertebrate Reproduction and Development 41: 73–81.
  • Rao B.Q., Li H. Xiong Y. Lan S.B. Li D.H. & Liu Y.D. 2012. Response of the artificial cyanobacterial crusts to low temperature and light stress and the micro-structure changes under laboratory conditions. Huan Jing Ke Xue 33: 2793–2803.
  • Schmid V., Peter S. & Schäfer C. 1995. Prolonged high light treatment of plant cells results in changes of the amount, the localization and the electrophoretic behavior of several thylakoid membrane proteins. Photosynthesis Research 44: 287–295.
  • Schoenle E.J., Adams L.D. & Sammons D.W. 1984. Insulin-induced rapid decrease of a major protein in fat cell plasma membranes. Journal of Biological Chemistry 19: 12112–12116.
  • Talts E., Oja V., Rämma H., Rasolov B., Anijalg A. & Laisk A. 2007. Dark inactivation of ferredoxin-NADP reductase and cyclic electron flow under far-red light in sunflower leaves. Photosynthesis Research 94: 109–20.
  • Tamoi M., Murakami A., Takeda T. & Shigeoka S. 1998. Acquisition of a new type of fructose-1,6-bisphosphatase with resistance to hydrogen peroxide in cyanobacteria: molecular characterization of the enzyme from Synechocystis PCC 6803. Biochimica et Biophysica Acta 1383: 232–244.
  • Vernotte C., Picaud M., Kirilovsky D., Olive J., Ajlani G., & Astier C. 1992. Changes in the photosynthetic apparatus in the cyanobacterium Synechocystis sp. PCC 6714 following light-to-dark and dark-to-light transitions. Photosynthesis Research 32: 45–57.
  • Walker J.L. & Oliver D.J. 1986. Light-induced increases in the glycine decarboxylase multienzyme complex from pea leaf mitochondria. Archives of Biochemistry and Biophysics 248: 626–638.
  • Wang J., Chen L., Huang S., Liu J., Ren X., Tian X., Qiao J. & Zhang W. 2012. RNA-seq based identification and mutant validation of gene targets related to ethanol resistance in cyanobacterial Synechocystis sp. PCC 6803. Biotechnology of Biofuels 5: 89.
  • Zhang L., Yu Z.F., Jiang L., Jiang J., Luo H.B. & Fu L.R. 2011. Effect of post-harvest heat treatment on proteome change of peach fruit during ripening. Journal of Proteomics 74: 1135–1145.
  • Zhang Y.M., Zhao J.M., Xiang Y., Bian X.C., Zuo Q.M., Shen Q., Gai J.Y. & Xing H. 2011. Proteomics study of changes in soybean lines resistant and sensitive to Phytophthora sojae. Proteome Science 9: 52–64.

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